RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 Q3ZCU0 254 aa13.58□□□□□ -0.24
SQLE-205ENST00000521232 FAM27D1Q5T7N8 215 aa13.58□□□□□ -0.24
SQLE-205ENST00000521232 SIGIRRQ6IA17 410 aa13.58□□□□□ -0.24
SQLE-205ENST00000521232 LRRTM1Q86UE6 522 aa13.58□□□□□ -0.24
SQLE-205ENST00000521232 DRAM1Q8N682 238 aa13.58□□□□□ -0.24
SQLE-205ENST00000521232 OR5AU1Q8NGC0 362 aa13.58□□□□□ -0.24
SQLE-205ENST00000521232 OR56B4Q8NH76 319 aa13.58□□□□□ -0.24
SQLE-205ENST00000521232 TMED9Q9BVK6 235 aa13.58□□□□□ -0.24
SQLE-205ENST00000521232 ANKRD60Q9BZ19 345 aa13.58□□□□□ -0.24
SQLE-205ENST00000521232 TRAPPC2LQ9UL33 140 aa13.58□□□□□ -0.24
SQLE-205ENST00000521232 C12orf77C9JDV5 145 aa13.57□□□□□ -0.24
SQLE-205ENST00000521232 UBBP0CG47 229 aa13.57□□□□□ -0.24
SQLE-205ENST00000521232 SRMP19623 302 aa13.57□□□□□ -0.24
SQLE-205ENST00000521232 VHLP40337 213 aa13.57□□□□□ -0.24
SQLE-205ENST00000521232 ZNF816Q0VGE8 651 aaPredicted RBP13.57□□□□□ -0.24
SQLE-205ENST00000521232 C1orf100Q5SVJ3 147 aa13.57□□□□□ -0.24
SQLE-205ENST00000521232 GLT8D1Q68CQ7 371 aa13.57□□□□□ -0.24
SQLE-205ENST00000521232 CEACAM19Q7Z692 300 aa13.57□□□□□ -0.24
SQLE-205ENST00000521232 CENPVQ7Z7K6 275 aaPredicted RBP13.57□□□□□ -0.24
SQLE-205ENST00000521232 OR4K15Q8NH41 348 aa13.57□□□□□ -0.24
SQLE-205ENST00000521232 UBALD1Q8TB05 177 aa13.57□□□□□ -0.24
SQLE-205ENST00000521232 CST11Q9H112 138 aa13.57□□□□□ -0.24
SQLE-205ENST00000521232 RAB9BQ9NP90 201 aa13.57□□□□□ -0.24
SQLE-205ENST00000521232 MOB4Q9Y3A3 225 aa13.57□□□□□ -0.24
SQLE-205ENST00000521232 SH2D7A6NKC9 451 aaPredicted RBP13.56□□□□□ -0.24
SQLE-205ENST00000521232 SPINT2O43291 252 aa13.56□□□□□ -0.24
SQLE-205ENST00000521232 GAPDHP04406 335 aaKnown RBP13.56□□□□□ -0.24
SQLE-205ENST00000521232 UCHL1P09936 223 aa13.56□□□□□ -0.24
SQLE-205ENST00000521232 TPBGQ13641 420 aa13.56□□□□□ -0.24
SQLE-205ENST00000521232 EBI3Q14213 229 aa13.56□□□□□ -0.24
SQLE-205ENST00000521232 TMEM30BQ3MIR4 351 aa13.56□□□□□ -0.24
SQLE-205ENST00000521232 C6orf183Q5T699 404 aa13.56□□□□□ -0.24
SQLE-205ENST00000521232 FAM53AQ6NSI3 398 aaPredicted RBP13.56□□□□□ -0.24
SQLE-205ENST00000521232 TRAT1Q6PIZ9 186 aa13.56□□□□□ -0.24
SQLE-205ENST00000521232 ST6GALNAC6Q969X2 333 aa13.56□□□□□ -0.24
SQLE-205ENST00000521232 ISYNA1Q9NPH2 558 aa13.56□□□□□ -0.24
SQLE-205ENST00000521232 IGHV3-43A0A0B4J1X8 118 aa13.55□□□□□ -0.24
SQLE-205ENST00000521232 IGHV1-3A0A0C4DH29 117 aa13.55□□□□□ -0.24
SQLE-205ENST00000521232 UBE2QL1A1L167 161 aa13.55□□□□□ -0.24
SQLE-205ENST00000521232 CCRL2O00421 344 aa13.55□□□□□ -0.24
SQLE-205ENST00000521232 HSD17B6O14756 317 aa13.55□□□□□ -0.24
SQLE-205ENST00000521232 RGS10O43665 173 aa13.55□□□□□ -0.24
SQLE-205ENST00000521232 PDCD6O75340 191 aa13.55□□□□□ -0.24
SQLE-205ENST00000521232 IGHV3-43DP0DP04 118 aa13.55□□□□□ -0.24
SQLE-205ENST00000521232 VSIG8P0DPA2 414 aa13.55□□□□□ -0.24
SQLE-205ENST00000521232 TMEM11P17152 192 aa13.55□□□□□ -0.24
SQLE-205ENST00000521232 RCC1P18754 421 aaPredicted RBP13.55□□□□□ -0.24
SQLE-205ENST00000521232 CRHBPP24387 322 aa13.55□□□□□ -0.24
SQLE-205ENST00000521232 HSD17B12Q53GQ0 312 aa13.55□□□□□ -0.24
SQLE-205ENST00000521232 TCTEX1D4Q5JR98 221 aa13.55□□□□□ -0.24
SQLE-205ENST00000521232 RBM48Q5RL73 367 aaKnown RBP13.55□□□□□ -0.24
SQLE-205ENST00000521232 LIPKQ5VXJ0 399 aa13.55□□□□□ -0.24
SQLE-205ENST00000521232 OR4F17Q8NGA8 305 aa13.55□□□□□ -0.24
SQLE-205ENST00000521232 UFD1Q92890 307 aa13.55□□□□□ -0.24
SQLE-205ENST00000521232 FAM46BQ96A09 425 aa13.55□□□□□ -0.24
SQLE-205ENST00000521232 R3HDM4Q96D70 268 aa13.55□□□□□ -0.24
SQLE-205ENST00000521232 OR4F4Q96R69 305 aa13.55□□□□□ -0.24
SQLE-205ENST00000521232 VCX3BQ9H321 246 aa13.55□□□□□ -0.24
SQLE-205ENST00000521232 MBNL3Q9NUK0 354 aaKnown RBP13.55□□□□□ -0.24
SQLE-205ENST00000521232 DNAH3Q8TD57 4116 aa13.54□□□□□ -0.24
SQLE-205ENST00000521232 FGF16O43320 207 aa13.54□□□□□ -0.24
SQLE-205ENST00000521232 MPIG6BO95866 241 aa13.54□□□□□ -0.24
SQLE-205ENST00000521232 IGKV1D-33P01593 117 aa13.54□□□□□ -0.24
SQLE-205ENST00000521232 IGKV1-33P01594 117 aa13.54□□□□□ -0.24
SQLE-205ENST00000521232 HBZP02008 142 aa13.54□□□□□ -0.24
SQLE-205ENST00000521232 ZNF134P52741 427 aa13.54□□□□□ -0.24
SQLE-205ENST00000521232 HES1Q14469 280 aa13.54□□□□□ -0.24
SQLE-205ENST00000521232 STEAP3Q658P3 488 aa13.54□□□□□ -0.24
SQLE-205ENST00000521232 TMEM91Q6ZNR0 172 aa13.54□□□□□ -0.24
SQLE-205ENST00000521232 SLC25A48Q6ZT89 311 aaKnown RBP13.54□□□□□ -0.24
SQLE-205ENST00000521232 MOB3BQ86TA1 216 aa13.54□□□□□ -0.24
SQLE-205ENST00000521232 ZNF554Q86TJ5 538 aa13.54□□□□□ -0.24
SQLE-205ENST00000521232 C1QL4Q86Z23 238 aa13.54□□□□□ -0.24
SQLE-205ENST00000521232 C5orf56Q8N8D9 126 aa13.54□□□□□ -0.24
SQLE-205ENST00000521232 ZNF439Q8NDP4 499 aa13.54□□□□□ -0.24
SQLE-205ENST00000521232 CYYR1Q96J86 154 aa13.54□□□□□ -0.24
SQLE-205ENST00000521232 G3V4G9 280 aa13.53□□□□□ -0.24
SQLE-205ENST00000521232 SLC22A1O15245 554 aa13.53□□□□□ -0.24
SQLE-205ENST00000521232 SLC31A2O15432 143 aa13.53□□□□□ -0.24
SQLE-205ENST00000521232 IL3RAP26951 378 aa13.53□□□□□ -0.24
SQLE-205ENST00000521232 HTR2CP28335 458 aa13.53□□□□□ -0.24
SQLE-205ENST00000521232 REG1BP48304 166 aa13.53□□□□□ -0.24
SQLE-205ENST00000521232 ZNF137PP52743 207 aa13.53□□□□□ -0.24
SQLE-205ENST00000521232 RPS27AP62979 156 aaKnown RBP13.53□□□□□ -0.24
SQLE-205ENST00000521232 QRFPP83859 136 aa13.53□□□□□ -0.24
SQLE-205ENST00000521232 HNF4GQ14541 408 aa13.53□□□□□ -0.24
SQLE-205ENST00000521232 TRAM1Q15629 374 aa13.53□□□□□ -0.24
SQLE-205ENST00000521232 CT45A1Q5HYN5 189 aa13.53□□□□□ -0.24
SQLE-205ENST00000521232 C9orf152Q5JTZ5 239 aa13.53□□□□□ -0.24
SQLE-205ENST00000521232 SAMD5Q5TGI4 173 aa13.53□□□□□ -0.24
SQLE-205ENST00000521232 OR10K2Q6IF99 312 aa13.53□□□□□ -0.24
SQLE-205ENST00000521232 PRSS48Q7RTY5 328 aa13.53□□□□□ -0.24
SQLE-205ENST00000521232 IZUMO1Q8IYV9 350 aa13.53□□□□□ -0.24
SQLE-205ENST00000521232 OR1L1Q8NH94 360 aa13.53□□□□□ -0.24
SQLE-205ENST00000521232 CT45A3Q8NHU0 189 aa13.53□□□□□ -0.24
SQLE-205ENST00000521232 KCNG3Q8TAE7 436 aa13.53□□□□□ -0.24
SQLE-205ENST00000521232 MRPL30Q8TCC3 161 aaKnown RBP13.53□□□□□ -0.24
SQLE-205ENST00000521232 RTN4IP1Q8WWV3 396 aaPredicted RBP13.53□□□□□ -0.24
SQLE-205ENST00000521232 TMEM203Q969S6 136 aa13.53□□□□□ -0.24
SQLE-205ENST00000521232 TM2D1Q9BX74 207 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms