RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 PDZD9Q8IXQ8 264 aa14.75□□□□□ -0.05
VEGFA-222ENST00000520948 OR11H6Q8NGC7 330 aa14.75□□□□□ -0.05
VEGFA-222ENST00000520948 DYNC2LI1Q8TCX1 351 aa14.75□□□□□ -0.05
VEGFA-222ENST00000520948 ACOT12Q8WYK0 555 aa14.75□□□□□ -0.05
VEGFA-222ENST00000520948 KIRREL1Q96J84 757 aa14.75□□□□□ -0.05
VEGFA-222ENST00000520948 TMEM133Q9H2Q1 129 aa14.75□□□□□ -0.05
VEGFA-222ENST00000520948 RIMS4Q9H426 269 aaPredicted RBP14.75□□□□□ -0.05
VEGFA-222ENST00000520948 PRDM13Q9H4Q3 707 aa14.75□□□□□ -0.05
VEGFA-222ENST00000520948 IDI2-AS1Q9NZ38 188 aa14.75□□□□□ -0.05
VEGFA-222ENST00000520948 TRAPPC2LQ9UL33 140 aa14.75□□□□□ -0.05
VEGFA-222ENST00000520948 PKD1L1Q8TDX9 2849 aa14.75□□□□□ -0.05
VEGFA-222ENST00000520948 SCGNO76038 276 aa14.74□□□□□ -0.05
VEGFA-222ENST00000520948 GNB3P16520 340 aa14.74□□□□□ -0.05
VEGFA-222ENST00000520948 CD34P28906 385 aa14.74□□□□□ -0.05
VEGFA-222ENST00000520948 SSTR5P35346 364 aa14.74□□□□□ -0.05
VEGFA-222ENST00000520948 ZNF260Q3ZCT1 412 aa14.74□□□□□ -0.05
VEGFA-222ENST00000520948 CDNFQ49AH0 187 aa14.74□□□□□ -0.05
VEGFA-222ENST00000520948 UTF1Q5T230 341 aa14.74□□□□□ -0.05
VEGFA-222ENST00000520948 RFESDQ8TAC1 157 aa14.74□□□□□ -0.05
VEGFA-222ENST00000520948 AJUBAQ96IF1 538 aa14.74□□□□□ -0.05
VEGFA-222ENST00000520948 CMTM3Q96MX0 182 aa14.74□□□□□ -0.05
VEGFA-222ENST00000520948 HDHD3Q9BSH5 251 aaPredicted RBP14.74□□□□□ -0.05
VEGFA-222ENST00000520948 MS4A7Q9GZW8 240 aaPredicted RBP14.74□□□□□ -0.05
VEGFA-222ENST00000520948 A0A0A6YYH2 397 aa14.73□□□□□ -0.05
VEGFA-222ENST00000520948 A6NJ64 397 aa14.73□□□□□ -0.05
VEGFA-222ENST00000520948 SERPINE3A8MV23 424 aa14.73□□□□□ -0.05
VEGFA-222ENST00000520948 ODF3BA8MYP8 253 aa14.73□□□□□ -0.05
VEGFA-222ENST00000520948 C12orf77C9JDV5 145 aa14.73□□□□□ -0.05
VEGFA-222ENST00000520948 F2RL2O00254 374 aa14.73□□□□□ -0.05
VEGFA-222ENST00000520948 NPFFO15130 113 aa14.73□□□□□ -0.05
VEGFA-222ENST00000520948 ARL6IP1Q15041 203 aa14.73□□□□□ -0.05
VEGFA-222ENST00000520948 C6orf183Q5T699 404 aa14.73□□□□□ -0.05
VEGFA-222ENST00000520948 TRAT1Q6PIZ9 186 aa14.73□□□□□ -0.05
VEGFA-222ENST00000520948 PNKDQ8N490 385 aa14.73□□□□□ -0.05
VEGFA-222ENST00000520948 OR52M1Q8NGK5 317 aa14.73□□□□□ -0.05
VEGFA-222ENST00000520948 OR13D1Q8NGV5 346 aa14.73□□□□□ -0.05
VEGFA-222ENST00000520948 ARL11Q969Q4 196 aa14.73□□□□□ -0.05
VEGFA-222ENST00000520948 CMSS1Q9BQ75 279 aaKnown RBP14.73□□□□□ -0.05
VEGFA-222ENST00000520948 ZMAT3Q9HA38 289 aaKnown RBP14.73□□□□□ -0.05
VEGFA-222ENST00000520948 ELF5Q9UKW6 265 aaPredicted RBP14.73□□□□□ -0.05
VEGFA-222ENST00000520948 IGHV2-26A0A0B4J1V2 119 aa14.72□□□□□ -0.05
VEGFA-222ENST00000520948 ZNF701M0R085 212 aaPredicted RBP14.72□□□□□ -0.05
VEGFA-222ENST00000520948 RNASE1P07998 156 aaKnown RBP14.72□□□□□ -0.05
VEGFA-222ENST00000520948 LOXL3P58215 753 aa14.72□□□□□ -0.05
VEGFA-222ENST00000520948 HMGN3Q15651 99 aa14.72□□□□□ -0.05
VEGFA-222ENST00000520948 MIDNQ504T8 468 aa14.72□□□□□ -0.05
VEGFA-222ENST00000520948 UBE2NLQ5JXB2 153 aa14.72□□□□□ -0.05
VEGFA-222ENST00000520948 ZNF626Q68DY1 528 aa14.72□□□□□ -0.05
VEGFA-222ENST00000520948 TREML4Q6UXN2 200 aa14.72□□□□□ -0.05
VEGFA-222ENST00000520948 C5orf24Q7Z6I8 188 aa14.72□□□□□ -0.05
VEGFA-222ENST00000520948 SAMD12Q8N8I0 201 aa14.72□□□□□ -0.05
VEGFA-222ENST00000520948 TAF9BQ9HBM6 251 aa14.72□□□□□ -0.05
VEGFA-222ENST00000520948 Q9N2K0 584 aa14.72□□□□□ -0.05
VEGFA-222ENST00000520948 TRRAPQ9Y4A5 3859 aa14.71□□□□□ -0.05
VEGFA-222ENST00000520948 A0A1W2PRD5 423 aa14.71□□□□□ -0.05
VEGFA-222ENST00000520948 A0A1W2PRF3 423 aa14.71□□□□□ -0.05
VEGFA-222ENST00000520948 A0A1W2PRM7 423 aa14.71□□□□□ -0.05
VEGFA-222ENST00000520948 HBZP02008 142 aa14.71□□□□□ -0.05
VEGFA-222ENST00000520948 MELTFP08582 738 aa14.71□□□□□ -0.05
VEGFA-222ENST00000520948 GSTP1P09211 210 aaKnown RBP14.71□□□□□ -0.05
VEGFA-222ENST00000520948 COX7A1P24310 79 aa14.71□□□□□ -0.05
VEGFA-222ENST00000520948 DEFA6Q01524 100 aa14.71□□□□□ -0.05
VEGFA-222ENST00000520948 SLC9A3R2Q15599 337 aa14.71□□□□□ -0.05
VEGFA-222ENST00000520948 LDLRAD2Q5SZI1 272 aa14.71□□□□□ -0.05
VEGFA-222ENST00000520948 ABHD12Q8N2K0 398 aa14.71□□□□□ -0.05
VEGFA-222ENST00000520948 S100A16Q96FQ6 103 aaKnown RBP14.71□□□□□ -0.05
VEGFA-222ENST00000520948 CLEC7AQ9BXN2 247 aa14.71□□□□□ -0.05
VEGFA-222ENST00000520948 ZNF286AQ9HBT8 521 aa14.71□□□□□ -0.05
VEGFA-222ENST00000520948 C12orf4Q9NQ89 552 aa14.71□□□□□ -0.05
VEGFA-222ENST00000520948 DIABLOQ9NR28 239 aa14.71□□□□□ -0.05
VEGFA-222ENST00000520948 COMMD3Q9UBI1 195 aa14.71□□□□□ -0.05
VEGFA-222ENST00000520948 A0A075B6Q4 140 aa14.7□□□□□ -0.06
VEGFA-222ENST00000520948 A0A0U1RQK1 487 aa14.7□□□□□ -0.06
VEGFA-222ENST00000520948 MDFIC2A0A1B0GVS7 189 aa14.7□□□□□ -0.06
VEGFA-222ENST00000520948 SPINT2O43291 252 aa14.7□□□□□ -0.06
VEGFA-222ENST00000520948 XRCC3O43542 346 aa14.7□□□□□ -0.06
VEGFA-222ENST00000520948 NOL3O60936 208 aaKnown RBP14.7□□□□□ -0.06
VEGFA-222ENST00000520948 IGLV1-47P01700 117 aa14.7□□□□□ -0.06
VEGFA-222ENST00000520948 EIF4EP06730 217 aaKnown RBP14.7□□□□□ -0.06
VEGFA-222ENST00000520948 CD3GP09693 182 aa14.7□□□□□ -0.06
VEGFA-222ENST00000520948 SAA4P35542 130 aa14.7□□□□□ -0.06
VEGFA-222ENST00000520948 DEFB112Q30KQ8 113 aa14.7□□□□□ -0.06
VEGFA-222ENST00000520948 HACD4Q5VWC8 232 aa14.7□□□□□ -0.06
VEGFA-222ENST00000520948 OR1L1Q8NH94 360 aa14.7□□□□□ -0.06
VEGFA-222ENST00000520948 UBALD1Q8TB05 177 aa14.7□□□□□ -0.06
VEGFA-222ENST00000520948 KCNIP1Q9NZI2 227 aa14.7□□□□□ -0.06
VEGFA-222ENST00000520948 CCDC59Q9P031 241 aaKnown RBP14.7□□□□□ -0.06
VEGFA-222ENST00000520948 RSL24D1Q9UHA3 163 aaKnown RBP14.7□□□□□ -0.06
VEGFA-222ENST00000520948 TRAV18A0A075B6X5 111 aa14.69□□□□□ -0.06
VEGFA-222ENST00000520948 APOA1P02647 267 aa14.69□□□□□ -0.06
VEGFA-222ENST00000520948 MDKP21741 143 aaPredicted RBP14.69□□□□□ -0.06
VEGFA-222ENST00000520948 SOX6P35712 828 aa14.69□□□□□ -0.06
VEGFA-222ENST00000520948 HTD2P86397 168 aa14.69□□□□□ -0.06
VEGFA-222ENST00000520948 SRSF7Q16629 238 aaKnown RBP eCLIP14.69□□□□□ -0.067e-11■□□□□ 9.1
VEGFA-222ENST00000520948 PNLIPRP3Q17RR3 467 aa14.69□□□□□ -0.06
VEGFA-222ENST00000520948 TMEM30BQ3MIR4 351 aa14.69□□□□□ -0.06
VEGFA-222ENST00000520948 Q3ZCU0 254 aa14.69□□□□□ -0.06
VEGFA-222ENST00000520948 PDLIM3Q53GG5 364 aaPredicted RBP14.69□□□□□ -0.06
VEGFA-222ENST00000520948 MZT2AQ6P582 158 aa14.69□□□□□ -0.06
VEGFA-222ENST00000520948 MOB1BQ7L9L4 216 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms