RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 RGS11O94810 467 aa7.32□□□□□ -1.24
HDAC6-232ENST00000489053 TSPAN15O95858 294 aa7.32□□□□□ -1.24
HDAC6-232ENST00000489053 MT-ND4P03905 459 aa7.32□□□□□ -1.24
HDAC6-232ENST00000489053 OPN1MWP04001 364 aa7.32□□□□□ -1.24
HDAC6-232ENST00000489053 SNRNP70P08621 437 aaKnown RBP7.32□□□□□ -1.24
HDAC6-232ENST00000489053 OPN1MW2P0DN77 364 aa7.32□□□□□ -1.24
HDAC6-232ENST00000489053 OPN1MW3P0DN78 364 aa7.32□□□□□ -1.24
HDAC6-232ENST00000489053 IGHV3-43DP0DP04 118 aa7.32□□□□□ -1.24
HDAC6-232ENST00000489053 PF4V1P10720 104 aa7.32□□□□□ -1.24
HDAC6-232ENST00000489053 PSMD7P51665 324 aa7.32□□□□□ -1.24
HDAC6-232ENST00000489053 BLCAPP62952 87 aa7.32□□□□□ -1.24
HDAC6-232ENST00000489053 SLC35A2P78381 396 aa7.32□□□□□ -1.24
HDAC6-232ENST00000489053 DEFA6Q01524 100 aa7.32□□□□□ -1.24
HDAC6-232ENST00000489053 MLLT11Q13015 90 aaPredicted RBP7.32□□□□□ -1.24
HDAC6-232ENST00000489053 RAB11BQ15907 218 aa7.32□□□□□ -1.24
HDAC6-232ENST00000489053 CCBE1Q6UXH8 406 aaPredicted RBP7.32□□□□□ -1.24
HDAC6-232ENST00000489053 ZNF367Q7RTV3 350 aa7.32□□□□□ -1.24
HDAC6-232ENST00000489053 DRAM1Q8N682 238 aa7.32□□□□□ -1.24
HDAC6-232ENST00000489053 TMEM104Q8NE00 496 aa7.32□□□□□ -1.24
HDAC6-232ENST00000489053 OR10V1Q8NGI7 309 aa7.32□□□□□ -1.24
HDAC6-232ENST00000489053 OR52M1Q8NGK5 317 aa7.32□□□□□ -1.24
HDAC6-232ENST00000489053 SETD6Q8TBK2 473 aa7.32□□□□□ -1.24
HDAC6-232ENST00000489053 R3HDM4Q96D70 268 aa7.32□□□□□ -1.24
HDAC6-232ENST00000489053 Q96M66 194 aa7.32□□□□□ -1.24
HDAC6-232ENST00000489053 URM1Q9BTM9 101 aaKnown RBP7.32□□□□□ -1.24
HDAC6-232ENST00000489053 LINC00574Q9H8X3 128 aa7.32□□□□□ -1.24
HDAC6-232ENST00000489053 OR2S2Q9NQN1 319 aa7.32□□□□□ -1.24
HDAC6-232ENST00000489053 PLEKHJ1Q9NW61 149 aa7.32□□□□□ -1.24
HDAC6-232ENST00000489053 GFOD1Q9NXC2 390 aa7.32□□□□□ -1.24
HDAC6-232ENST00000489053 STEAP1Q9UHE8 339 aa7.32□□□□□ -1.24
HDAC6-232ENST00000489053 RAB26Q9ULW5 256 aa7.32□□□□□ -1.24
HDAC6-232ENST00000489053 A0A1W2PRX2 142 aa7.31□□□□□ -1.24
HDAC6-232ENST00000489053 TCRBV4S1A1TA0A5B7 111 aa7.31□□□□□ -1.24
HDAC6-232ENST00000489053 C12orf77C9JDV5 145 aa7.31□□□□□ -1.24
HDAC6-232ENST00000489053 PDCD5O14737 125 aa7.31□□□□□ -1.24
HDAC6-232ENST00000489053 PIN1P1O15428 100 aa7.31□□□□□ -1.24
HDAC6-232ENST00000489053 BPNT1O95861 308 aa7.31□□□□□ -1.24
HDAC6-232ENST00000489053 IGKV1D-33P01593 117 aa7.31□□□□□ -1.24
HDAC6-232ENST00000489053 IGKV1-33P01594 117 aa7.31□□□□□ -1.24
HDAC6-232ENST00000489053 HBZP02008 142 aa7.31□□□□□ -1.24
HDAC6-232ENST00000489053 CD28P10747 220 aa7.31□□□□□ -1.24
HDAC6-232ENST00000489053 ARSBP15848 533 aa7.31□□□□□ -1.24
HDAC6-232ENST00000489053 CRHBPP24387 322 aa7.31□□□□□ -1.24
HDAC6-232ENST00000489053 MYL9P24844 172 aa7.31□□□□□ -1.24
HDAC6-232ENST00000489053 CALRP27797 417 aaKnown RBP7.31□□□□□ -1.24
HDAC6-232ENST00000489053 VHLP40337 213 aa7.31□□□□□ -1.24
HDAC6-232ENST00000489053 REG1BP48304 166 aa7.31□□□□□ -1.24
HDAC6-232ENST00000489053 RPS27AP62979 156 aaKnown RBP7.31□□□□□ -1.24
HDAC6-232ENST00000489053 SLC35B1P78383 322 aa7.31□□□□□ -1.24
HDAC6-232ENST00000489053 INSL4Q14641 139 aa7.31□□□□□ -1.24
HDAC6-232ENST00000489053 P2RY14Q15391 338 aa7.31□□□□□ -1.24
HDAC6-232ENST00000489053 TMEM95Q3KNT9 176 aa7.31□□□□□ -1.24
HDAC6-232ENST00000489053 Q3ZCU0 254 aa7.31□□□□□ -1.24
HDAC6-232ENST00000489053 FAM27D1Q5T7N8 215 aa7.31□□□□□ -1.24
HDAC6-232ENST00000489053 THNSL2Q86YJ6 484 aa7.31□□□□□ -1.24
HDAC6-232ENST00000489053 TGIF2LXQ8IUE1 241 aa7.31□□□□□ -1.24
HDAC6-232ENST00000489053 LYG1Q8N1E2 194 aa7.31□□□□□ -1.24
HDAC6-232ENST00000489053 Q8N2B8 174 aa7.31□□□□□ -1.24
HDAC6-232ENST00000489053 SVOPQ8N4V2 548 aa7.31□□□□□ -1.24
HDAC6-232ENST00000489053 OR5AU1Q8NGC0 362 aa7.31□□□□□ -1.24
HDAC6-232ENST00000489053 MGLLQ99685 303 aa7.31□□□□□ -1.24
HDAC6-232ENST00000489053 OCSTAMPQ9BR26 566 aa7.31□□□□□ -1.24
HDAC6-232ENST00000489053 DUSP21Q9H596 190 aa7.31□□□□□ -1.24
HDAC6-232ENST00000489053 TAF9BQ9HBM6 251 aa7.31□□□□□ -1.24
HDAC6-232ENST00000489053 ISYNA1Q9NPH2 558 aa7.31□□□□□ -1.24
HDAC6-232ENST00000489053 ACOT13Q9NPJ3 140 aa7.31□□□□□ -1.24
HDAC6-232ENST00000489053 SERTAD4Q9NUC0 356 aa7.31□□□□□ -1.24
HDAC6-232ENST00000489053 ZNF581Q9P0T4 197 aa7.31□□□□□ -1.24
HDAC6-232ENST00000489053 RCC2Q9P258 522 aaKnown RBP7.31□□□□□ -1.24
HDAC6-232ENST00000489053 LRRC42Q9Y546 428 aa7.31□□□□□ -1.24
HDAC6-232ENST00000489053 WNK1Q9H4A3 2382 aa7.3□□□□□ -1.24
HDAC6-232ENST00000489053 IGHV1-3A0A0C4DH29 117 aa7.3□□□□□ -1.24
HDAC6-232ENST00000489053 SERPINE3A8MV23 424 aa7.3□□□□□ -1.24
HDAC6-232ENST00000489053 LY6LH3BQJ8 138 aa7.3□□□□□ -1.24
HDAC6-232ENST00000489053 PF4P02776 101 aa7.3□□□□□ -1.24
HDAC6-232ENST00000489053 UCHL1P09936 223 aa7.3□□□□□ -1.24
HDAC6-232ENST00000489053 CGB3P0DN86 165 aa7.3□□□□□ -1.24
HDAC6-232ENST00000489053 CGB7P0DN87 165 aa7.3□□□□□ -1.24
HDAC6-232ENST00000489053 CPEP16870 476 aa7.3□□□□□ -1.24
HDAC6-232ENST00000489053 BLVRBP30043 206 aaPredicted RBP7.3□□□□□ -1.24
HDAC6-232ENST00000489053 RPS25P62851 125 aaKnown RBP7.3□□□□□ -1.24
HDAC6-232ENST00000489053 TPBGQ13641 420 aa7.3□□□□□ -1.24
HDAC6-232ENST00000489053 OR10K2Q6IF99 312 aa7.3□□□□□ -1.24
HDAC6-232ENST00000489053 UNQ9370/PRO34162Q6UXP9 181 aa7.3□□□□□ -1.24
HDAC6-232ENST00000489053 MOB1BQ7L9L4 216 aa7.3□□□□□ -1.24
HDAC6-232ENST00000489053 ZNF554Q86TJ5 538 aa7.3□□□□□ -1.24
HDAC6-232ENST00000489053 LRRTM1Q86UE6 522 aa7.3□□□□□ -1.24
HDAC6-232ENST00000489053 NDUFA11Q86Y39 141 aa7.3□□□□□ -1.24
HDAC6-232ENST00000489053 FOXRED2Q8IWF2 684 aa7.3□□□□□ -1.24
HDAC6-232ENST00000489053 C8orf31Q8N9H6 132 aa7.3□□□□□ -1.24
HDAC6-232ENST00000489053 OR2AK2Q8NG84 335 aa7.3□□□□□ -1.24
HDAC6-232ENST00000489053 OR2T10Q8NGZ9 312 aa7.3□□□□□ -1.24
HDAC6-232ENST00000489053 OR1L1Q8NH94 360 aa7.3□□□□□ -1.24
HDAC6-232ENST00000489053 IL1F10Q8WWZ1 152 aa7.3□□□□□ -1.24
HDAC6-232ENST00000489053 SGCDQ92629 289 aa7.3□□□□□ -1.24
HDAC6-232ENST00000489053 GALMQ96C23 342 aa7.3□□□□□ -1.24
HDAC6-232ENST00000489053 CITED2Q99967 270 aaPredicted RBP7.3□□□□□ -1.24
HDAC6-232ENST00000489053 LSM2Q9Y333 95 aaKnown RBP7.3□□□□□ -1.24
HDAC6-232ENST00000489053 AK6Q9Y3D8 172 aaKnown RBP7.3□□□□□ -1.24
HDAC6-232ENST00000489053 IGHV3-72A0A0B4J1Y9 119 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms