RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 APOBEC3DQ96AK3 386 aaPredicted RBP2.92□□□□□ -1.94
UBR3-209ENST00000477461 RAB39BQ96DA2 213 aa2.92□□□□□ -1.94
UBR3-209ENST00000477461 PIK3IP1Q96FE7 263 aa2.92□□□□□ -1.94
UBR3-209ENST00000477461 AMELYQ99218 206 aa2.92□□□□□ -1.94
UBR3-209ENST00000477461 MGLLQ99685 303 aa2.92□□□□□ -1.94
UBR3-209ENST00000477461 DOK1Q99704 481 aa2.92□□□□□ -1.94
UBR3-209ENST00000477461 BCL2L14Q9BZR8 327 aa2.92□□□□□ -1.94
UBR3-209ENST00000477461 PBOV1Q9GZY1 135 aa2.92□□□□□ -1.94
UBR3-209ENST00000477461 OR51B6Q9H340 312 aa2.92□□□□□ -1.94
UBR3-209ENST00000477461 ISG20L2Q9H9L3 353 aaKnown RBP2.92□□□□□ -1.94
UBR3-209ENST00000477461 PLEKHA1Q9HB21 404 aa2.92□□□□□ -1.94
UBR3-209ENST00000477461 NOX3Q9HBY0 568 aa2.92□□□□□ -1.94
UBR3-209ENST00000477461 ISYNA1Q9NPH2 558 aa2.92□□□□□ -1.94
UBR3-209ENST00000477461 ACOT13Q9NPJ3 140 aa2.92□□□□□ -1.94
UBR3-209ENST00000477461 PAK1IP1Q9NWT1 392 aaPredicted RBP2.92□□□□□ -1.94
UBR3-209ENST00000477461 BABAM2Q9NXR7 383 aa2.92□□□□□ -1.94
UBR3-209ENST00000477461 MRM2Q9UI43 246 aaKnown RBP2.92□□□□□ -1.94
UBR3-209ENST00000477461 OR52A1Q9UKL2 312 aa2.92□□□□□ -1.94
UBR3-209ENST00000477461 RNF115Q9Y4L5 304 aa2.92□□□□□ -1.94
UBR3-209ENST00000477461 R4GMQ9 66 aa2.92□□□□□ -1.94
UBR3-209ENST00000477461 PRR14LQ5THK1 2151 aa2.92□□□□□ -1.94
UBR3-209ENST00000477461 ZFYVE26Q68DK2 2539 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 MGAQ8IWI9 3026 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 A0A0A6YYD4 124 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 IGHV1-18A0A0C4DH31 117 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 A0A0U1RQV5 110 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 DPRXA6NFQ7 191 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 CCDC160A6NGH7 325 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 TRIM64A6NGJ6 449 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 GGT3PA6NGU5 568 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 TRIM64BA6NI03 449 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 ATP6V1G2-DDX39BF2Z307 99 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 CCRL2O00421 344 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 ABCD4O14678 606 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 SMPD2O60906 423 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 NOL3O60936 208 aaKnown RBP2.91□□□□□ -1.94
UBR3-209ENST00000477461 LY6G6DO95868 133 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 PNPP00491 289 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 HLA-DPB1P04440 258 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 CD2P06729 351 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 ADRA2AP08913 450 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 OCM2P0CE71 109 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 OCMP0CE72 109 aaPredicted RBP2.91□□□□□ -1.94
UBR3-209ENST00000477461 UBCP0CG48 685 aaKnown RBP2.91□□□□□ -1.94
UBR3-209ENST00000477461 PCMT1P22061 227 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 CRYGSP22914 178 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 TUBG1P23258 451 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 PSMA1P25786 263 aaKnown RBP2.91□□□□□ -1.94
UBR3-209ENST00000477461 MAPK3P27361 379 aaPredicted RBP2.91□□□□□ -1.94
UBR3-209ENST00000477461 OTX1P32242 354 aaPredicted RBP2.91□□□□□ -1.94
UBR3-209ENST00000477461 RPL5P46777 297 aaKnown RBP2.91□□□□□ -1.94
UBR3-209ENST00000477461 GTF2A1P52655 376 aaPredicted RBP2.91□□□□□ -1.94
UBR3-209ENST00000477461 PPP1CBP62140 327 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 BSPH1Q075Z2 132 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 TFF3Q07654 80 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 MLLT11Q13015 90 aaPredicted RBP2.91□□□□□ -1.94
UBR3-209ENST00000477461 SNTB2Q13425 540 aaKnown RBP2.91□□□□□ -1.94
UBR3-209ENST00000477461 CDK5R1Q15078 307 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 TRAM1Q15629 374 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 MOGQ16653 247 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 TIMM50Q3ZCQ8 353 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 NCMAPQ5T1S8 102 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 ZNF684Q5T5D7 378 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 UBE2UQ5VVX9 321 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 LIPKQ5VXJ0 399 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 PAMR1Q6UXH9 720 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 PGAP1Q75T13 922 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 ELMOD2Q8IZ81 293 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 FTMTQ8N4E7 242 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 MS4A15Q8N5U1 240 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 ZFP41Q8N8Y5 198 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 CCDC54Q8NEL0 328 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 OR8B12Q8NGG6 310 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 SLC25A40Q8TBP6 338 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 THRSPQ92748 146 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 SMIM19Q96E16 107 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 MRPL53Q96EL3 112 aaKnown RBP2.91□□□□□ -1.94
UBR3-209ENST00000477461 PELI1Q96FA3 418 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 REEP6Q96HR9 211 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 ZNF75AQ96N20 296 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 OR5M11Q96RB7 305 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 ZNF649Q9BS31 505 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 TMED9Q9BVK6 235 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 RGCCQ9H4X1 137 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 ELL3Q9HB65 397 aaPredicted RBP2.91□□□□□ -1.94
UBR3-209ENST00000477461 NEK6Q9HC98 313 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 EXOSC4Q9NPD3 245 aaKnown RBP2.91□□□□□ -1.94
UBR3-209ENST00000477461 GPR84Q9NQS5 396 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 TUBG2Q9NRH3 451 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 FAM206AQ9NX38 181 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 ANAPC11Q9NYG5 84 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 PTTG3PQ9NZH4 202 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 NUFIP1Q9UHK0 495 aaKnown RBP2.91□□□□□ -1.94
UBR3-209ENST00000477461 ZNF391Q9UJN7 358 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 HHLA2Q9UM44 414 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 SLC22A13Q9Y226 551 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 LSM2Q9Y333 95 aaKnown RBP2.91□□□□□ -1.94
UBR3-209ENST00000477461 SPEGQ15772 3267 aa2.91□□□□□ -1.94
UBR3-209ENST00000477461 RAI1Q7Z5J4 1906 aaPredicted RBP2.91□□□□□ -1.94
UBR3-209ENST00000477461 CADP27708 2225 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms