RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 OR4C46A6NHA9 309 aa4.55□□□□□ -1.68
HDAC3-206ENST00000471968 HMGB1P1B2RPK0 211 aaPredicted RBP4.55□□□□□ -1.68
HDAC3-206ENST00000471968 NPIPB11E5RHQ5 1161 aa4.55□□□□□ -1.68
HDAC3-206ENST00000471968 TSPAN4O14817 238 aa4.55□□□□□ -1.68
HDAC3-206ENST00000471968 SPAG7O75391 227 aa4.55□□□□□ -1.68
HDAC3-206ENST00000471968 OR2H2O95918 312 aa4.55□□□□□ -1.68
HDAC3-206ENST00000471968 SHBGP04278 402 aa4.55□□□□□ -1.68
HDAC3-206ENST00000471968 C21orf33P30042 268 aaPredicted RBP4.55□□□□□ -1.68
HDAC3-206ENST00000471968 PYCR1P32322 319 aa4.55□□□□□ -1.68
HDAC3-206ENST00000471968 SSTR5P35346 364 aa4.55□□□□□ -1.68
HDAC3-206ENST00000471968 PRKCDQ05655 676 aa4.55□□□□□ -1.68
HDAC3-206ENST00000471968 EXOSC2Q13868 293 aaKnown RBP4.55□□□□□ -1.68
HDAC3-206ENST00000471968 ZNF585BQ52M93 769 aa4.55□□□□□ -1.68
HDAC3-206ENST00000471968 LPCAT4Q643R3 524 aa4.55□□□□□ -1.68
HDAC3-206ENST00000471968 MORN3Q6PF18 240 aaPredicted RBP4.55□□□□□ -1.68
HDAC3-206ENST00000471968 FAM131AQ6UXB0 335 aa4.55□□□□□ -1.68
HDAC3-206ENST00000471968 HACD2Q6Y1H2 254 aa4.55□□□□□ -1.68
HDAC3-206ENST00000471968 TMEM179BQ7Z7N9 219 aa4.55□□□□□ -1.68
HDAC3-206ENST00000471968 MREGQ8N565 214 aa4.55□□□□□ -1.68
HDAC3-206ENST00000471968 LINC00311Q8N616 119 aa4.55□□□□□ -1.68
HDAC3-206ENST00000471968 ADAD2Q8NCV1 583 aaKnown RBP4.55□□□□□ -1.68
HDAC3-206ENST00000471968 BBS1Q8NFJ9 593 aa4.55□□□□□ -1.68
HDAC3-206ENST00000471968 OR4K13Q8NH42 304 aa4.55□□□□□ -1.68
HDAC3-206ENST00000471968 APOPT1Q96IL0 206 aa4.55□□□□□ -1.68
HDAC3-206ENST00000471968 SORT1Q99523 831 aa4.55□□□□□ -1.68
HDAC3-206ENST00000471968 CADM1Q9BY67 442 aaKnown RBP4.55□□□□□ -1.68
HDAC3-206ENST00000471968 PKIBQ9C010 78 aa4.55□□□□□ -1.68
HDAC3-206ENST00000471968 CHST5Q9GZS9 411 aa4.55□□□□□ -1.68
HDAC3-206ENST00000471968 RBFOX1Q9NWB1 397 aaKnown RBP4.55□□□□□ -1.68
HDAC3-206ENST00000471968 SH3GLB1Q9Y371 365 aa4.55□□□□□ -1.68
HDAC3-206ENST00000471968 MEIKINA0A087WXM9 373 aa4.54□□□□□ -1.68
HDAC3-206ENST00000471968 RPS10-NUDT3A0A1W2PQS6 291 aa4.54□□□□□ -1.68
HDAC3-206ENST00000471968 RRHO14718 337 aa4.54□□□□□ -1.68
HDAC3-206ENST00000471968 SLC31A2O15432 143 aa4.54□□□□□ -1.68
HDAC3-206ENST00000471968 GSC2O15499 205 aa4.54□□□□□ -1.68
HDAC3-206ENST00000471968 GGCTO75223 188 aaKnown RBP4.54□□□□□ -1.68
HDAC3-206ENST00000471968 ENTPD6O75354 484 aa4.54□□□□□ -1.68
HDAC3-206ENST00000471968 TXNDC12O95881 172 aa4.54□□□□□ -1.68
HDAC3-206ENST00000471968 NUDT3O95989 172 aa4.54□□□□□ -1.68
HDAC3-206ENST00000471968 CA2P00918 260 aa4.54□□□□□ -1.68
HDAC3-206ENST00000471968 SPART-AS1P0CW21 52 aa4.54□□□□□ -1.68
HDAC3-206ENST00000471968 T-ENOLP0DO92 83 aa4.54□□□□□ -1.68
HDAC3-206ENST00000471968 LBPP18428 481 aa4.54□□□□□ -1.68
HDAC3-206ENST00000471968 LGALS7P47929 136 aa4.54□□□□□ -1.68
HDAC3-206ENST00000471968 SCN1BQ07699 218 aa4.54□□□□□ -1.68
HDAC3-206ENST00000471968 CD300CQ08708 224 aa4.54□□□□□ -1.68
HDAC3-206ENST00000471968 RIPPLY1Q0D2K3 151 aa4.54□□□□□ -1.68
HDAC3-206ENST00000471968 ZNF146Q15072 292 aa4.54□□□□□ -1.68
HDAC3-206ENST00000471968 LIPKQ5VXJ0 399 aa4.54□□□□□ -1.68
HDAC3-206ENST00000471968 SLC25A48Q6ZT89 311 aaKnown RBP4.54□□□□□ -1.68
HDAC3-206ENST00000471968 SSX7Q7RTT5 188 aa4.54□□□□□ -1.68
HDAC3-206ENST00000471968 COMMD2Q86X83 199 aa4.54□□□□□ -1.68
HDAC3-206ENST00000471968 ZNF511Q8NB15 262 aa4.54□□□□□ -1.68
HDAC3-206ENST00000471968 SLC26A7Q8TE54 656 aa4.54□□□□□ -1.68
HDAC3-206ENST00000471968 SPDL1Q96EA4 605 aa4.54□□□□□ -1.68
HDAC3-206ENST00000471968 ERMAPQ96PL5 475 aaPredicted RBP4.54□□□□□ -1.68
HDAC3-206ENST00000471968 GPX7Q96SL4 187 aaPredicted RBP4.54□□□□□ -1.68
HDAC3-206ENST00000471968 PBOV1Q9GZY1 135 aa4.54□□□□□ -1.68
HDAC3-206ENST00000471968 LINC00574Q9H8X3 128 aa4.54□□□□□ -1.68
HDAC3-206ENST00000471968 GORASP2Q9H8Y8 452 aa4.54□□□□□ -1.68
HDAC3-206ENST00000471968 EXOSC4Q9NPD3 245 aaKnown RBP4.54□□□□□ -1.68
HDAC3-206ENST00000471968 COA4Q9NYJ1 87 aa4.54□□□□□ -1.68
HDAC3-206ENST00000471968 NKIRAS1Q9NYS0 192 aa4.54□□□□□ -1.68
HDAC3-206ENST00000471968 ZNF230Q9UIE0 474 aaPredicted RBP4.54□□□□□ -1.68
HDAC3-206ENST00000471968 TBC1D24Q9ULP9 559 aa4.54□□□□□ -1.68
HDAC3-206ENST00000471968 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.53□□□□□ -1.68
HDAC3-206ENST00000471968 FAM230AA0A1W2PPH8 454 aa4.53□□□□□ -1.68
HDAC3-206ENST00000471968 A8MWP6 167 aa4.53□□□□□ -1.68
HDAC3-206ENST00000471968 ZNF593O00488 134 aaPredicted RBP4.53□□□□□ -1.68
HDAC3-206ENST00000471968 SH2D1BO14796 132 aa4.53□□□□□ -1.68
HDAC3-206ENST00000471968 IDH3BO43837 385 aa4.53□□□□□ -1.68
HDAC3-206ENST00000471968 TUSC2O75896 110 aa4.53□□□□□ -1.68
HDAC3-206ENST00000471968 ATP6V1G2O95670 118 aa4.53□□□□□ -1.68
HDAC3-206ENST00000471968 CSN2P05814 226 aa4.53□□□□□ -1.68
HDAC3-206ENST00000471968 GIG44P09565 113 aaPredicted RBP4.53□□□□□ -1.68
HDAC3-206ENST00000471968 ZNF44P15621 663 aa4.53□□□□□ -1.68
HDAC3-206ENST00000471968 HIST1H1CP16403 213 aaKnown RBP4.53□□□□□ -1.68
HDAC3-206ENST00000471968 PRKACAP17612 351 aa4.53□□□□□ -1.68
HDAC3-206ENST00000471968 GCAP28676 217 aa4.53□□□□□ -1.68
HDAC3-206ENST00000471968 EMP1P54849 157 aa4.53□□□□□ -1.68
HDAC3-206ENST00000471968 ST3GAL3Q11203 375 aa4.53□□□□□ -1.68
HDAC3-206ENST00000471968 TMEM69Q5SWH9 247 aa4.53□□□□□ -1.68
HDAC3-206ENST00000471968 ZNF562Q6V9R5 426 aa4.53□□□□□ -1.68
HDAC3-206ENST00000471968 DPY19L2P2Q6ZN68 376 aa4.53□□□□□ -1.68
HDAC3-206ENST00000471968 SLC25A26Q70HW3 274 aa4.53□□□□□ -1.68
HDAC3-206ENST00000471968 FAM58AQ8N1B3 248 aa4.53□□□□□ -1.68
HDAC3-206ENST00000471968 GBGT1Q8N5D6 347 aa4.53□□□□□ -1.68
HDAC3-206ENST00000471968 ANKRD42Q8N9B4 389 aa4.53□□□□□ -1.68
HDAC3-206ENST00000471968 PROKR2Q8NFJ6 384 aa4.53□□□□□ -1.68
HDAC3-206ENST00000471968 OR51L1Q8NGJ5 315 aa4.53□□□□□ -1.68
HDAC3-206ENST00000471968 ZNRF4Q8WWF5 429 aa4.53□□□□□ -1.68
HDAC3-206ENST00000471968 TAMM41Q96BW9 452 aa4.53□□□□□ -1.68
HDAC3-206ENST00000471968 C10orf35Q96D05 121 aa4.53□□□□□ -1.68
HDAC3-206ENST00000471968 ATP6V1G3Q96LB4 118 aa4.53□□□□□ -1.68
HDAC3-206ENST00000471968 ZIM3Q96PE6 472 aa4.53□□□□□ -1.68
HDAC3-206ENST00000471968 TXLNGYQ9BZA5 131 aa4.53□□□□□ -1.68
HDAC3-206ENST00000471968 POLR2J2Q9GZM3 115 aaKnown RBP4.53□□□□□ -1.68
HDAC3-206ENST00000471968 MAGT1Q9H0U3 335 aa4.53□□□□□ -1.68
HDAC3-206ENST00000471968 POLR2J3Q9H1A7 115 aaKnown RBP4.53□□□□□ -1.68
HDAC3-206ENST00000471968 C5orf66Q9H5L9 145 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms