RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 NHLH1Q02575 133 aa11.81□□□□□ -0.52
NPHP4-207ENST00000470763 TDRG1Q3Y452 100 aa11.81□□□□□ -0.52
NPHP4-207ENST00000470763 MRGPRGQ86SM5 289 aa11.81□□□□□ -0.52
NPHP4-207ENST00000470763 ZNF295-AS1Q8N0V1 137 aa11.81□□□□□ -0.52
NPHP4-207ENST00000470763 GJC3Q8NFK1 279 aa11.81□□□□□ -0.52
NPHP4-207ENST00000470763 POC1BQ8TC44 478 aa11.81□□□□□ -0.52
NPHP4-207ENST00000470763 LRRC61Q9BV99 259 aa11.81□□□□□ -0.52
NPHP4-207ENST00000470763 OR51I2Q9H344 312 aa11.81□□□□□ -0.52
NPHP4-207ENST00000470763 SPTY2D1-AS1A0A0U1RR47 76 aa11.81□□□□□ -0.52
NPHP4-207ENST00000470763 HPRT1P00492 218 aa11.81□□□□□ -0.52
NPHP4-207ENST00000470763 SELEP16581 610 aa11.81□□□□□ -0.52
NPHP4-207ENST00000470763 MSR1P21757 451 aa11.81□□□□□ -0.52
NPHP4-207ENST00000470763 CNN1P51911 297 aaKnown RBP11.81□□□□□ -0.52
NPHP4-207ENST00000470763 ARL16Q0P5N6 197 aa11.81□□□□□ -0.52
NPHP4-207ENST00000470763 TMEM92Q6UXU6 159 aa11.81□□□□□ -0.52
NPHP4-207ENST00000470763 DTD1Q8TEA8 209 aa11.81□□□□□ -0.52
NPHP4-207ENST00000470763 COL5A1P20908 1838 aaPredicted RBP11.81□□□□□ -0.52
NPHP4-207ENST00000470763 FBLP22087 321 aaKnown RBP11.8□□□□□ -0.52
NPHP4-207ENST00000470763 MALLQ13021 153 aa11.8□□□□□ -0.52
NPHP4-207ENST00000470763 ENDOGQ14249 297 aaKnown RBP11.8□□□□□ -0.52
NPHP4-207ENST00000470763 OR2T10Q8NGZ9 312 aa11.8□□□□□ -0.52
NPHP4-207ENST00000470763 GATAD1Q8WUU5 269 aa11.8□□□□□ -0.52
NPHP4-207ENST00000470763 LHX4Q969G2 390 aa11.8□□□□□ -0.52
NPHP4-207ENST00000470763 IL22RA2Q969J5 263 aa11.8□□□□□ -0.52
NPHP4-207ENST00000470763 RBM24Q9BX46 236 aaKnown RBP11.8□□□□□ -0.52
NPHP4-207ENST00000470763 CCL28Q9NRJ3 127 aa11.8□□□□□ -0.52
NPHP4-207ENST00000470763 MRPS18CQ9Y3D5 142 aaKnown RBP11.8□□□□□ -0.52
NPHP4-207ENST00000470763 EXPH5Q8NEV8 1989 aa11.8□□□□□ -0.52
NPHP4-207ENST00000470763 TOX3O15405 576 aaPredicted RBP11.8□□□□□ -0.52
NPHP4-207ENST00000470763 MRPS11P82912 194 aaKnown RBP11.8□□□□□ -0.52
NPHP4-207ENST00000470763 MEF2BQ02080 365 aaPredicted RBP11.8□□□□□ -0.52
NPHP4-207ENST00000470763 EIF3IQ13347 325 aaKnown RBP11.8□□□□□ -0.52
NPHP4-207ENST00000470763 ZNF573Q86YE8 665 aa11.8□□□□□ -0.52
NPHP4-207ENST00000470763 MBD3L1Q8WWY6 194 aa11.8□□□□□ -0.52
NPHP4-207ENST00000470763 MS4A10Q96PG2 267 aa11.8□□□□□ -0.52
NPHP4-207ENST00000470763 AURKAIP1Q9NWT8 199 aaPredicted RBP11.8□□□□□ -0.52
NPHP4-207ENST00000470763 OR6C3Q9NZP0 311 aa11.8□□□□□ -0.52
NPHP4-207ENST00000470763 HSPB6O14558 160 aa11.79□□□□□ -0.52
NPHP4-207ENST00000470763 KBTBD11O94819 623 aa11.79□□□□□ -0.52
NPHP4-207ENST00000470763 KCNMB1Q16558 191 aa11.79□□□□□ -0.52
NPHP4-207ENST00000470763 PLPPR5Q32ZL2 321 aa11.79□□□□□ -0.52
NPHP4-207ENST00000470763 PRR18Q8N4B5 295 aa11.79□□□□□ -0.52
NPHP4-207ENST00000470763 PARLQ9H300 379 aa11.79□□□□□ -0.52
NPHP4-207ENST00000470763 LPAR2Q9HBW0 351 aa11.79□□□□□ -0.52
NPHP4-207ENST00000470763 PDCD6O75340 191 aa11.79□□□□□ -0.52
NPHP4-207ENST00000470763 IFNA1P01562 189 aa11.79□□□□□ -0.52
NPHP4-207ENST00000470763 SCTP09683 121 aa11.79□□□□□ -0.52
NPHP4-207ENST00000470763 CTSSP25774 331 aa11.79□□□□□ -0.52
NPHP4-207ENST00000470763 CHRNA7P36544 502 aa11.79□□□□□ -0.52
NPHP4-207ENST00000470763 NPBWR2P48146 333 aa11.79□□□□□ -0.52
NPHP4-207ENST00000470763 TFPI2P48307 235 aa11.79□□□□□ -0.52
NPHP4-207ENST00000470763 ACOT6Q3I5F7 207 aaPredicted RBP11.79□□□□□ -0.52
NPHP4-207ENST00000470763 TOMM20LQ6UXN7 152 aa11.79□□□□□ -0.52
NPHP4-207ENST00000470763 MYPOPQ86VE0 399 aaPredicted RBP11.79□□□□□ -0.52
NPHP4-207ENST00000470763 OXGR1Q96P68 337 aa11.79□□□□□ -0.52
NPHP4-207ENST00000470763 EML6Q6ZMW3 1958 aa11.79□□□□□ -0.52
NPHP4-207ENST00000470763 IGHV3-15A0A0B4J1V0 119 aa11.79□□□□□ -0.52
NPHP4-207ENST00000470763 TP53I11O14683 189 aa11.79□□□□□ -0.52
NPHP4-207ENST00000470763 TCN2P20062 427 aa11.79□□□□□ -0.52
NPHP4-207ENST00000470763 MLF1P58340 268 aa11.79□□□□□ -0.52
NPHP4-207ENST00000470763 ZNF92Q03936 586 aa11.79□□□□□ -0.52
NPHP4-207ENST00000470763 HIST3H3Q16695 136 aa11.79□□□□□ -0.52
NPHP4-207ENST00000470763 OR51H1Q8NH63 302 aa11.79□□□□□ -0.52
NPHP4-207ENST00000470763 SPSB1Q96BD6 273 aa11.79□□□□□ -0.52
NPHP4-207ENST00000470763 TCRBV21S2A2A0A5A6 115 aa11.78□□□□□ -0.52
NPHP4-207ENST00000470763 IGHV4-34P06331 123 aa11.78□□□□□ -0.52
NPHP4-207ENST00000470763 OR10J1P30954 320 aa11.78□□□□□ -0.52
NPHP4-207ENST00000470763 TRA2AQ13595 282 aaKnown RBP eCLIP11.78□□□□□ -0.52
NPHP4-207ENST00000470763 OR1K1Q8NGR3 316 aa11.78□□□□□ -0.52
NPHP4-207ENST00000470763 MRPL30Q8TCC3 161 aaKnown RBP11.78□□□□□ -0.52
NPHP4-207ENST00000470763 ZNF837Q96EG3 531 aaPredicted RBP11.78□□□□□ -0.52
NPHP4-207ENST00000470763 ABHD14BQ96IU4 210 aa11.78□□□□□ -0.52
NPHP4-207ENST00000470763 PTRH2Q9Y3E5 179 aaKnown RBP11.78□□□□□ -0.52
NPHP4-207ENST00000470763 LCATP04180 440 aa11.78□□□□□ -0.52
NPHP4-207ENST00000470763 UCP1P25874 307 aa11.78□□□□□ -0.52
NPHP4-207ENST00000470763 GCH1P30793 250 aa11.78□□□□□ -0.52
NPHP4-207ENST00000470763 TNFSF10P50591 281 aa11.78□□□□□ -0.52
NPHP4-207ENST00000470763 OR5I1Q13606 314 aa11.78□□□□□ -0.52
NPHP4-207ENST00000470763 WDR5BQ86VZ2 330 aa11.78□□□□□ -0.52
NPHP4-207ENST00000470763 OR4F5Q8NH21 305 aa11.78□□□□□ -0.52
NPHP4-207ENST00000470763 OR1L3Q8NH93 324 aa11.78□□□□□ -0.52
NPHP4-207ENST00000470763 ZNF845Q96IR2 970 aaPredicted RBP11.78□□□□□ -0.52
NPHP4-207ENST00000470763 OR4F4Q96R69 305 aa11.78□□□□□ -0.52
NPHP4-207ENST00000470763 SLC25A22Q9H936 323 aa11.78□□□□□ -0.52
NPHP4-207ENST00000470763 PARD6AQ9NPB6 346 aa11.78□□□□□ -0.52
NPHP4-207ENST00000470763 SLC39A9Q9NUM3 307 aa11.78□□□□□ -0.52
NPHP4-207ENST00000470763 PAM16Q9Y3D7 125 aa11.78□□□□□ -0.52
NPHP4-207ENST00000470763 ABCA7Q8IZY2 2146 aa11.78□□□□□ -0.52
NPHP4-207ENST00000470763 SDK2Q58EX2 2172 aa11.78□□□□□ -0.52
NPHP4-207ENST00000470763 SLC22A20A6NK97 555 aa11.77□□□□□ -0.52
NPHP4-207ENST00000470763 LILRA1O75019 489 aa11.77□□□□□ -0.52
NPHP4-207ENST00000470763 IGKV1D-33P01593 117 aa11.77□□□□□ -0.52
NPHP4-207ENST00000470763 IGKV1-33P01594 117 aa11.77□□□□□ -0.52
NPHP4-207ENST00000470763 GNG10P50151 68 aa11.77□□□□□ -0.52
NPHP4-207ENST00000470763 HNRNPKP61978 463 aaKnown RBP eCLIP11.77□□□□□ -0.52
NPHP4-207ENST00000470763 FAM78BQ5VT40 261 aa11.77□□□□□ -0.52
NPHP4-207ENST00000470763 GPR146Q96CH1 333 aa11.77□□□□□ -0.52
NPHP4-207ENST00000470763 RIMS4Q9H426 269 aaPredicted RBP11.77□□□□□ -0.52
NPHP4-207ENST00000470763 HS3ST3A1Q9Y663 406 aa11.77□□□□□ -0.52
NPHP4-207ENST00000470763 DMXL1Q9Y485 3027 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms