RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 SYT6Q5T7P8 510 aaPredicted RBP17.34■□□□□ 0.37
LIME1-203ENST00000465591 LIPKQ5VXJ0 399 aa17.34■□□□□ 0.37
LIME1-203ENST00000465591 OR10K2Q6IF99 312 aa17.34■□□□□ 0.37
LIME1-203ENST00000465591 C5orf24Q7Z6I8 188 aa17.34■□□□□ 0.37
LIME1-203ENST00000465591 AKR1E2Q96JD6 320 aa17.34■□□□□ 0.37
LIME1-203ENST00000465591 KCNK15Q9H427 330 aa17.34■□□□□ 0.37
LIME1-203ENST00000465591 UBE2QL1A1L167 161 aa17.33■□□□□ 0.36
LIME1-203ENST00000465591 FAM90A10PA6NDY2 464 aa17.33■□□□□ 0.36
LIME1-203ENST00000465591 FAM90A7PA6NKC0 464 aa17.33■□□□□ 0.36
LIME1-203ENST00000465591 FAM90A23PA8MXZ1 464 aa17.33■□□□□ 0.36
LIME1-203ENST00000465591 H3BUI4 141 aa17.33■□□□□ 0.36
LIME1-203ENST00000465591 SLC31A2O15432 143 aa17.33■□□□□ 0.36
LIME1-203ENST00000465591 PEX14O75381 377 aa17.33■□□□□ 0.36
LIME1-203ENST00000465591 RCC1P18754 421 aaPredicted RBP17.33■□□□□ 0.36
LIME1-203ENST00000465591 GPR50Q13585 617 aa17.33■□□□□ 0.36
LIME1-203ENST00000465591 C1orf100Q5SVJ3 147 aa17.33■□□□□ 0.36
LIME1-203ENST00000465591 CEACAM19Q7Z692 300 aa17.33■□□□□ 0.36
LIME1-203ENST00000465591 THNSL2Q86YJ6 484 aa17.33■□□□□ 0.36
LIME1-203ENST00000465591 OR52M1Q8NGK5 317 aa17.33■□□□□ 0.36
LIME1-203ENST00000465591 OR10X1Q8NGY0 326 aa17.33■□□□□ 0.36
LIME1-203ENST00000465591 TMEM203Q969S6 136 aa17.33■□□□□ 0.36
LIME1-203ENST00000465591 RGS10O43665 173 aa17.32■□□□□ 0.36
LIME1-203ENST00000465591 MPIG6BO95866 241 aa17.32■□□□□ 0.36
LIME1-203ENST00000465591 OPN1MWP04001 364 aa17.32■□□□□ 0.36
LIME1-203ENST00000465591 OPN1MW2P0DN77 364 aa17.32■□□□□ 0.36
LIME1-203ENST00000465591 OPN1MW3P0DN78 364 aa17.32■□□□□ 0.36
LIME1-203ENST00000465591 VSIG8P0DPA2 414 aa17.32■□□□□ 0.36
LIME1-203ENST00000465591 FUT3P21217 361 aa17.32■□□□□ 0.36
LIME1-203ENST00000465591 CRHBPP24387 322 aa17.32■□□□□ 0.36
LIME1-203ENST00000465591 REG1BP48304 166 aa17.32■□□□□ 0.36
LIME1-203ENST00000465591 PDLIM3Q53GG5 364 aaPredicted RBP17.32■□□□□ 0.36
LIME1-203ENST00000465591 TCTEX1D4Q5JR98 221 aa17.32■□□□□ 0.36
LIME1-203ENST00000465591 C10orf99Q6UWK7 81 aa17.32■□□□□ 0.36
LIME1-203ENST00000465591 TMEM91Q6ZNR0 172 aa17.32■□□□□ 0.36
LIME1-203ENST00000465591 LINC00311Q8N616 119 aa17.32■□□□□ 0.36
LIME1-203ENST00000465591 OR5AU1Q8NGC0 362 aa17.32■□□□□ 0.36
LIME1-203ENST00000465591 OR1L1Q8NH94 360 aa17.32■□□□□ 0.36
LIME1-203ENST00000465591 PHYHIPQ92561 330 aa17.32■□□□□ 0.36
LIME1-203ENST00000465591 TRAPPC2LQ9UL33 140 aa17.32■□□□□ 0.36
LIME1-203ENST00000465591 TGP01266 2768 aa17.31■□□□□ 0.36
LIME1-203ENST00000465591 HSD17B6O14756 317 aa17.31■□□□□ 0.36
LIME1-203ENST00000465591 UCHL1P09936 223 aa17.31■□□□□ 0.36
LIME1-203ENST00000465591 FAM106CPP0CH98 169 aa17.31■□□□□ 0.36
LIME1-203ENST00000465591 CD37P11049 281 aa17.31■□□□□ 0.36
LIME1-203ENST00000465591 SRMP19623 302 aa17.31■□□□□ 0.36
LIME1-203ENST00000465591 MAP2K4P45985 399 aa17.31■□□□□ 0.36
LIME1-203ENST00000465591 RAB7AP51149 207 aa17.31■□□□□ 0.36
LIME1-203ENST00000465591 RPS25P62851 125 aaKnown RBP17.31■□□□□ 0.36
LIME1-203ENST00000465591 TPBGQ13641 420 aa17.31■□□□□ 0.36
LIME1-203ENST00000465591 HSD17B12Q53GQ0 312 aa17.31■□□□□ 0.36
LIME1-203ENST00000465591 NDUFA11Q86Y39 141 aa17.31■□□□□ 0.36
LIME1-203ENST00000465591 OR8H3Q8N146 312 aa17.31■□□□□ 0.36
LIME1-203ENST00000465591 ZNF439Q8NDP4 499 aa17.31■□□□□ 0.36
LIME1-203ENST00000465591 UFD1Q92890 307 aa17.31■□□□□ 0.36
LIME1-203ENST00000465591 RBMXL1Q96E39 390 aaKnown RBP17.31■□□□□ 0.36
LIME1-203ENST00000465591 GFI1Q99684 422 aa17.31■□□□□ 0.36
LIME1-203ENST00000465591 YTHDF1Q9BYJ9 559 aaKnown RBP17.31■□□□□ 0.36
LIME1-203ENST00000465591 GHRLQ9UBU3 117 aa17.31■□□□□ 0.36
LIME1-203ENST00000465591 MOB4Q9Y3A3 225 aa17.31■□□□□ 0.36
LIME1-203ENST00000465591 IGHV3-72A0A0B4J1Y9 119 aa17.3■□□□□ 0.36
LIME1-203ENST00000465591 CCRL2O00421 344 aa17.3■□□□□ 0.36
LIME1-203ENST00000465591 PDCD6O75340 191 aa17.3■□□□□ 0.36
LIME1-203ENST00000465591 IGKV1D-33P01593 117 aa17.3■□□□□ 0.36
LIME1-203ENST00000465591 IGKV1-33P01594 117 aa17.3■□□□□ 0.36
LIME1-203ENST00000465591 HBZP02008 142 aa17.3■□□□□ 0.36
LIME1-203ENST00000465591 HSMCR30P0CW71 290 aa17.3■□□□□ 0.36
LIME1-203ENST00000465591 ZNF134P52741 427 aa17.3■□□□□ 0.36
LIME1-203ENST00000465591 CD83Q01151 205 aa17.3■□□□□ 0.36
LIME1-203ENST00000465591 ZNF816Q0VGE8 651 aaPredicted RBP17.3■□□□□ 0.36
LIME1-203ENST00000465591 UNC119Q13432 240 aa17.3■□□□□ 0.36
LIME1-203ENST00000465591 HNF4GQ14541 408 aa17.3■□□□□ 0.36
LIME1-203ENST00000465591 GLT8D1Q68CQ7 371 aa17.3■□□□□ 0.36
LIME1-203ENST00000465591 PRR18Q8N4B5 295 aa17.3■□□□□ 0.36
LIME1-203ENST00000465591 C8orf31Q8N9H6 132 aa17.3■□□□□ 0.36
LIME1-203ENST00000465591 OR10V1Q8NGI7 309 aa17.3■□□□□ 0.36
LIME1-203ENST00000465591 MRPL30Q8TCC3 161 aaKnown RBP17.3■□□□□ 0.36
LIME1-203ENST00000465591 ST6GALNAC6Q969X2 333 aa17.3■□□□□ 0.36
LIME1-203ENST00000465591 CCDC90BQ9GZT6 254 aa17.3■□□□□ 0.36
LIME1-203ENST00000465591 IGHV1-3A0A0C4DH29 117 aa17.29■□□□□ 0.36
LIME1-203ENST00000465591 G3V4G9 280 aa17.29■□□□□ 0.36
LIME1-203ENST00000465591 GLAP06280 429 aa17.29■□□□□ 0.36
LIME1-203ENST00000465591 TMEM11P17152 192 aa17.29■□□□□ 0.36
LIME1-203ENST00000465591 CHATP28329 748 aa17.29■□□□□ 0.36
LIME1-203ENST00000465591 QRFPP83859 136 aa17.29■□□□□ 0.36
LIME1-203ENST00000465591 HES1Q14469 280 aa17.29■□□□□ 0.36
LIME1-203ENST00000465591 C9orf152Q5JTZ5 239 aa17.29■□□□□ 0.36
LIME1-203ENST00000465591 NKAPLQ5M9Q1 402 aa17.29■□□□□ 0.36
LIME1-203ENST00000465591 SULT4A1Q9BR01 284 aa17.29■□□□□ 0.36
LIME1-203ENST00000465591 NICN1Q9BSH3 213 aa17.29■□□□□ 0.36
LIME1-203ENST00000465591 CST11Q9H112 138 aa17.29■□□□□ 0.36
LIME1-203ENST00000465591 MBNL3Q9NUK0 354 aaKnown RBP17.29■□□□□ 0.36
LIME1-203ENST00000465591 A0A1W2PRX2 142 aa17.28■□□□□ 0.36
LIME1-203ENST00000465591 SLC22A1O15245 554 aa17.28■□□□□ 0.36
LIME1-203ENST00000465591 UBBP0CG47 229 aa17.28■□□□□ 0.36
LIME1-203ENST00000465591 HTR2CP28335 458 aa17.28■□□□□ 0.36
LIME1-203ENST00000465591 RPS27AP62979 156 aaKnown RBP17.28■□□□□ 0.36
LIME1-203ENST00000465591 CT45A1Q5HYN5 189 aa17.28■□□□□ 0.36
LIME1-203ENST00000465591 C6orf183Q5T699 404 aa17.28■□□□□ 0.36
LIME1-203ENST00000465591 PRSS48Q7RTY5 328 aa17.28■□□□□ 0.36
LIME1-203ENST00000465591 CENPVQ7Z7K6 275 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms