RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 FAM90A9PA6NNJ1 464 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 FAM90A12PA8MX19 464 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 FAM90A5PA8MXJ8 464 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 E9PQ18 207 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 GABRPO00591 440 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 SULT1B1O43704 296 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 CIB2O75838 187 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 ATP5HO75947 161 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 IGKV1D-33P01593 117 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 IGKV1-33P01594 117 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 MT-ND2P03891 347 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 ALDOBP05062 364 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 RPSAP08865 295 aaKnown RBP3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 FAM90A15PP0C7V4 464 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 FAM90A13PP0C7W8 464 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 FAM90A14PP0C7W9 464 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 FAM90A24PP0C7X0 464 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 FAM106CPP0CH98 169 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 IGHV3-43DP0DP04 118 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 DBTP11182 482 aaKnown RBP3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 CD34P28906 385 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 C21orf33P30042 268 aaPredicted RBP3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 SSTR5P35346 364 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 CEACAM3P40198 252 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 MNDAP41218 407 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 GLP1RP43220 463 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 REG1BP48304 166 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 RASSF2P50749 326 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 FHL3Q13643 280 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 SMN1Q16637 294 aaKnown RBP3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 PAN3Q58A45 887 aaKnown RBP3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 VAX1Q5SQQ9 334 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 SLC25A30Q5SVS4 291 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 OR2G6Q5TZ20 316 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 ZNF691Q5VV52 312 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 RSBN1Q5VWQ0 802 aaPredicted RBP3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 MEDAGQ5VYS4 303 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 IGFL4Q6B9Z1 124 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 C16orf82Q7Z2V1 217 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 C5orf24Q7Z6I8 188 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 MOB3BQ86TA1 216 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 IZUMO1Q8IYV9 350 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 SAXO1Q8IYX7 474 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 OSR2Q8N2R0 312 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 CBR4Q8N4T8 237 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 PARP16Q8N5Y8 322 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 ZNF565Q8N9K5 539 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 SUMF2Q8NBJ7 301 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 OR4X2Q8NGF9 303 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 OR51T1Q8NGJ9 327 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 OR52I1Q8NGK6 324 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 OR9G1Q8NH87 305 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 CNIH3Q8TBE1 160 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 TNFAIP8L1Q8WVP5 186 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 TSEN15Q8WW01 171 aaKnown RBP3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 RGP1Q92546 391 aaPredicted RBP3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 TOMM40LQ969M1 308 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 RPEQ96AT9 228 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 ZNF503Q96F45 646 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 CYYR1Q96J86 154 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 AKR1E2Q96JD6 320 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 GPER1Q99527 375 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 BARHL1Q9BZE3 327 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 FAM192AQ9GZU8 254 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 TAS2R4Q9NYW5 299 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 CALYQ9NYX4 217 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 IDI2-AS1Q9NZ38 188 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 OR6C3Q9NZP0 311 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 DHDHQ9UQ10 334 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 PCDHGB5Q9Y5G0 923 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 ORC6Q9Y5N6 252 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 GMPPBQ9Y5P6 360 aa3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 SIRT4Q9Y6E7 314 aaPredicted RBP3.7□□□□□ -1.82
GTF3C3-208ENST00000455546 LOC100130705A0A1B0GUX0 176 aa3.69□□□□□ -1.82
GTF3C3-208ENST00000455546 A0A1W2PP11 408 aa3.69□□□□□ -1.82
GTF3C3-208ENST00000455546 A0A1W2PPI3 338 aa3.69□□□□□ -1.82
GTF3C3-208ENST00000455546 NCBP2LA6PVI3 153 aaKnown RBP3.69□□□□□ -1.82
GTF3C3-208ENST00000455546 SERPINE3A8MV23 424 aa3.69□□□□□ -1.82
GTF3C3-208ENST00000455546 ZNF736B4DX44 427 aaPredicted RBP3.69□□□□□ -1.82
GTF3C3-208ENST00000455546 NPIPB11E5RHQ5 1161 aa3.69□□□□□ -1.82
GTF3C3-208ENST00000455546 GEMIN2O14893 280 aaKnown RBP3.69□□□□□ -1.82
GTF3C3-208ENST00000455546 MAGEB3O15480 346 aa3.69□□□□□ -1.82
GTF3C3-208ENST00000455546 CLIC3O95833 236 aa3.69□□□□□ -1.82
GTF3C3-208ENST00000455546 FADS2O95864 444 aaKnown RBP3.69□□□□□ -1.82
GTF3C3-208ENST00000455546 CSN2P05814 226 aa3.69□□□□□ -1.82
GTF3C3-208ENST00000455546 LIMS3P0CW19 117 aa3.69□□□□□ -1.82
GTF3C3-208ENST00000455546 LIMS4P0CW20 117 aa3.69□□□□□ -1.82
GTF3C3-208ENST00000455546 EGR2P11161 476 aaPredicted RBP3.69□□□□□ -1.82
GTF3C3-208ENST00000455546 TMEM11P17152 192 aa3.69□□□□□ -1.82
GTF3C3-208ENST00000455546 RAB3AP20336 220 aa3.69□□□□□ -1.82
GTF3C3-208ENST00000455546 SERPINA2P20848 420 aa3.69□□□□□ -1.82
GTF3C3-208ENST00000455546 VHLP40337 213 aa3.69□□□□□ -1.82
GTF3C3-208ENST00000455546 THBS3P49746 956 aa3.69□□□□□ -1.82
GTF3C3-208ENST00000455546 ETV1P50549 477 aa3.69□□□□□ -1.82
GTF3C3-208ENST00000455546 ALDH3A2P51648 485 aa3.69□□□□□ -1.82
GTF3C3-208ENST00000455546 ARHGDIBP52566 201 aa3.69□□□□□ -1.82
GTF3C3-208ENST00000455546 GBX2P52951 348 aaPredicted RBP3.69□□□□□ -1.82
GTF3C3-208ENST00000455546 RPL23AP62750 156 aaKnown RBP3.69□□□□□ -1.82
GTF3C3-208ENST00000455546 SLC35A2P78381 396 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms