RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 SLC36A3Q495N2 470 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 ZBED5Q49AG3 693 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 Q5BKY6 102 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 FAM27BQ5VT28 67 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 MEDAGQ5VYS4 303 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 RRM2BQ7LG56 351 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 SLC16A13Q7RTY0 426 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.55□□□□□ -1.84
SDCBP-205ENST00000447267 RTN4RL2Q86UN3 420 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 DHFR2Q86XF0 187 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 C11orf53Q8IXP5 236 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 TSPAN14Q8NG11 270 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 OR11H6Q8NGC7 330 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 OR52N4Q8NGI2 321 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 OR52M1Q8NGK5 317 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 OR13D1Q8NGV5 346 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 OR6F1Q8NGZ6 308 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 ZFAND1Q8TCF1 268 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 NUDCD2Q8WVJ2 157 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 RASD2Q96D21 266 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 C14orf144Q96I85 54 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 TPD52L3Q96J77 140 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 CNBD2Q96M20 576 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 WDR13Q9H1Z4 485 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 HMG20AQ9NP66 347 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 TMEM216Q9P0N5 145 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 CLEC2DQ9UHP7 191 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 RAB26Q9ULW5 256 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 TP53TG1Q9Y2A0 90 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 AP4S1Q9Y587 144 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 NUBP2Q9Y5Y2 271 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 ALG5Q9Y673 324 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 EXOC1LA0A1B0GW35 172 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 TCRBV9S1A1TA0A576 114 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 METTL15A6NJ78 407 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 TMEM238C9JI98 176 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 H3BMQ9 156 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 RHODO00212 210 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 SIGLEC5O15389 551 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 IFNGP01579 166 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 TRAPPC2P0DI81 140 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 TRAPPC2BP0DI82 140 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 ADORA3P0DMS8 318 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 IL7P13232 177 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 IL7RP16871 459 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 BGNP21810 368 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 DCKP27707 260 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 SSTR1P30872 391 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 RPL3P39023 403 aaKnown RBP3.54□□□□□ -1.84
SDCBP-205ENST00000447267 CDKN1BP46527 198 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 GPR12P47775 334 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 DLX6P56179 175 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 FMODQ06828 376 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 RIPPLY1Q0D2K3 151 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 IL24Q13007 206 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 ASAH1Q13510 395 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 MAPK11Q15759 364 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 GRK1Q15835 563 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 RFX4Q33E94 735 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 HSD17B12Q53GQ0 312 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 ACTBL2Q562R1 376 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 GPR107Q5VW38 600 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 LPCAT4Q643R3 524 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 LCN12Q6JVE5 192 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 CGB2Q6NT52 195 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 CCDC137Q6PK04 289 aaKnown RBP3.54□□□□□ -1.84
SDCBP-205ENST00000447267 LINC00299Q6ZSB3 139 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 FOXL2NBQ6ZUU3 175 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 TMPRSS11FQ6ZWK6 438 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 SMIM15Q7Z3B0 74 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 CROCCP2Q86T23 111 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 WDR86Q86TI4 376 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 NOXA1Q86UR1 476 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 COMMD7Q86VX2 200 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 TGIF2LXQ8IUE1 241 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 RNF113BQ8IZP6 322 aaKnown RBP3.54□□□□□ -1.84
SDCBP-205ENST00000447267 ZNF561Q8N587 486 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 C15orf53Q8NAA6 179 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 TMEM185AQ8NFB2 350 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 FBXO25Q8TCJ0 367 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 CD300LFQ8TDQ1 290 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 SFT2D1Q8WV19 159 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 S100ZQ8WXG8 99 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 MCUR1Q96AQ8 359 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 PPP3R2Q96LZ3 170 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 KCTD7Q96MP8 289 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 TCEAL7Q9BRU2 100 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 ADAT1Q9BUB4 502 aaKnown RBP3.54□□□□□ -1.84
SDCBP-205ENST00000447267 RNF126Q9BV68 326 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 DPY30Q9C005 99 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 TOLLIPQ9H0E2 274 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 HDHD2Q9H0R4 259 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 OPA3Q9H6K4 179 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 MID1IP1Q9NPA3 183 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 CLEC5AQ9NY25 188 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 SMPD3Q9NY59 655 aaPredicted RBP3.54□□□□□ -1.84
SDCBP-205ENST00000447267 SLC2A8Q9NY64 477 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 TAS2R5Q9NYW4 299 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 MLXQ9UH92 298 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 GUCA1BQ9UMX6 200 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms