RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 SSX1Q16384 188 aa5.15□□□□□ -1.59
USP54-202ENST00000413442 TIMM50Q3ZCQ8 353 aa5.15□□□□□ -1.59
USP54-202ENST00000413442 TPTE2P1Q5T6R2 138 aa5.15□□□□□ -1.59
USP54-202ENST00000413442 SYT6Q5T7P8 510 aaPredicted RBP5.15□□□□□ -1.59
USP54-202ENST00000413442 FAM71F2Q6NXP2 309 aa5.15□□□□□ -1.59
USP54-202ENST00000413442 TMEM91Q6ZNR0 172 aa5.15□□□□□ -1.59
USP54-202ENST00000413442 RNF144BQ7Z419 303 aa5.15□□□□□ -1.59
USP54-202ENST00000413442 LHFPL4Q7Z7J7 247 aa5.15□□□□□ -1.59
USP54-202ENST00000413442 BATF2Q8N1L9 274 aa5.15□□□□□ -1.59
USP54-202ENST00000413442 OR13A1Q8NGR1 328 aa5.15□□□□□ -1.59
USP54-202ENST00000413442 OR13C5Q8NGS8 318 aa5.15□□□□□ -1.59
USP54-202ENST00000413442 OR10X1Q8NGY0 326 aa5.15□□□□□ -1.59
USP54-202ENST00000413442 PLPPR1Q8TBJ4 325 aa5.15□□□□□ -1.59
USP54-202ENST00000413442 WFDC12Q8WWY7 111 aa5.15□□□□□ -1.59
USP54-202ENST00000413442 EDARADDQ8WWZ3 215 aa5.15□□□□□ -1.59
USP54-202ENST00000413442 RNF5Q99942 180 aa5.15□□□□□ -1.59
USP54-202ENST00000413442 PLGRKTQ9HBL7 147 aa5.15□□□□□ -1.59
USP54-202ENST00000413442 PLEKHJ1Q9NW61 149 aa5.15□□□□□ -1.59
USP54-202ENST00000413442 NDUFB11Q9NX14 153 aa5.15□□□□□ -1.59
USP54-202ENST00000413442 GFOD1Q9NXC2 390 aa5.15□□□□□ -1.59
USP54-202ENST00000413442 STEAP1Q9UHE8 339 aa5.15□□□□□ -1.59
USP54-202ENST00000413442 JPT1Q9UK76 154 aa5.15□□□□□ -1.59
USP54-202ENST00000413442 SSR3Q9UNL2 185 aa5.15□□□□□ -1.59
USP54-202ENST00000413442 HILPDAQ9Y5L2 63 aa5.15□□□□□ -1.59
USP54-202ENST00000413442 SOX21Q9Y651 276 aaPredicted RBP5.15□□□□□ -1.59
USP54-202ENST00000413442 SVEP1Q4LDE5 3571 aa5.14□□□□□ -1.59
USP54-202ENST00000413442 PNMA8CA0A1B0GUJ8 204 aa5.14□□□□□ -1.59
USP54-202ENST00000413442 C15orf65H3BRN8 121 aa5.14□□□□□ -1.59
USP54-202ENST00000413442 SDCBPO00560 298 aaPredicted RBP5.14□□□□□ -1.59
USP54-202ENST00000413442 LANCL1O43813 399 aa5.14□□□□□ -1.59
USP54-202ENST00000413442 MPIG6BO95866 241 aa5.14□□□□□ -1.59
USP54-202ENST00000413442 OPN1MWP04001 364 aa5.14□□□□□ -1.59
USP54-202ENST00000413442 OPN1MW2P0DN77 364 aa5.14□□□□□ -1.59
USP54-202ENST00000413442 OPN1MW3P0DN78 364 aa5.14□□□□□ -1.59
USP54-202ENST00000413442 RAB3BP20337 219 aa5.14□□□□□ -1.59
USP54-202ENST00000413442 CHATP28329 748 aa5.14□□□□□ -1.59
USP54-202ENST00000413442 BLVRBP30043 206 aaPredicted RBP5.14□□□□□ -1.59
USP54-202ENST00000413442 MC5RP33032 325 aa5.14□□□□□ -1.59
USP54-202ENST00000413442 GP2P55259 537 aaKnown RBP5.14□□□□□ -1.59
USP54-202ENST00000413442 LOXL3P58215 753 aa5.14□□□□□ -1.59
USP54-202ENST00000413442 MRPS15P82914 257 aaKnown RBP5.14□□□□□ -1.59
USP54-202ENST00000413442 QRFPP83859 136 aa5.14□□□□□ -1.59
USP54-202ENST00000413442 PITPNAQ00169 270 aa5.14□□□□□ -1.59
USP54-202ENST00000413442 TAGLNQ01995 201 aaKnown RBP5.14□□□□□ -1.59
USP54-202ENST00000413442 RAB11BQ15907 218 aa5.14□□□□□ -1.59
USP54-202ENST00000413442 C2orf68Q2NKX9 166 aa5.14□□□□□ -1.59
USP54-202ENST00000413442 C2orf76Q3KRA6 126 aa5.14□□□□□ -1.59
USP54-202ENST00000413442 KCTD21Q4G0X4 260 aa5.14□□□□□ -1.59
USP54-202ENST00000413442 MORN2Q502X0 79 aa5.14□□□□□ -1.59
USP54-202ENST00000413442 BRICD5Q6PL45 260 aa5.14□□□□□ -1.59
USP54-202ENST00000413442 SLC25A48Q6ZT89 311 aaKnown RBP5.14□□□□□ -1.59
USP54-202ENST00000413442 SPARTQ8N0X7 666 aa5.14□□□□□ -1.59
USP54-202ENST00000413442 COMMD1Q8N668 190 aa5.14□□□□□ -1.59
USP54-202ENST00000413442 TMEM104Q8NE00 496 aa5.14□□□□□ -1.59
USP54-202ENST00000413442 OR10K1Q8NGX5 313 aa5.14□□□□□ -1.59
USP54-202ENST00000413442 OR2T10Q8NGZ9 312 aa5.14□□□□□ -1.59
USP54-202ENST00000413442 MRGPRDQ8TDS7 321 aa5.14□□□□□ -1.59
USP54-202ENST00000413442 CFHR4Q92496 578 aa5.14□□□□□ -1.59
USP54-202ENST00000413442 TOMM40LQ969M1 308 aa5.14□□□□□ -1.59
USP54-202ENST00000413442 ST6GALNAC6Q969X2 333 aa5.14□□□□□ -1.59
USP54-202ENST00000413442 FAM3DQ96BQ1 224 aa5.14□□□□□ -1.59
USP54-202ENST00000413442 PPIL3Q9H2H8 161 aaKnown RBP5.14□□□□□ -1.59
USP54-202ENST00000413442 MMP27Q9H306 513 aa5.14□□□□□ -1.59
USP54-202ENST00000413442 TAF9BQ9HBM6 251 aa5.14□□□□□ -1.59
USP54-202ENST00000413442 ZNF286AQ9HBT8 521 aa5.14□□□□□ -1.59
USP54-202ENST00000413442 VCX3AQ9NNX9 186 aa5.14□□□□□ -1.59
USP54-202ENST00000413442 OR2S2Q9NQN1 319 aa5.14□□□□□ -1.59
USP54-202ENST00000413442 TNFRSF19Q9NS68 423 aa5.14□□□□□ -1.59
USP54-202ENST00000413442 PIPOXQ9P0Z9 390 aa5.14□□□□□ -1.59
USP54-202ENST00000413442 ZNF580Q9UK33 172 aa5.14□□□□□ -1.59
USP54-202ENST00000413442 GAB2Q9UQC2 676 aa5.14□□□□□ -1.59
USP54-202ENST00000413442 A0A087WXM4 84 aa5.13□□□□□ -1.59
USP54-202ENST00000413442 A0A0A6YYH2 397 aa5.13□□□□□ -1.59
USP54-202ENST00000413442 A6NJ64 397 aa5.13□□□□□ -1.59
USP54-202ENST00000413442 IFITM5A6NNB3 132 aa5.13□□□□□ -1.59
USP54-202ENST00000413442 SERPINE3A8MV23 424 aa5.13□□□□□ -1.59
USP54-202ENST00000413442 RAB29O14966 203 aa5.13□□□□□ -1.59
USP54-202ENST00000413442 KCNAB3O43448 404 aa5.13□□□□□ -1.59
USP54-202ENST00000413442 MMP23AO75900 390 aa5.13□□□□□ -1.59
USP54-202ENST00000413442 NAPSAO96009 420 aa5.13□□□□□ -1.59
USP54-202ENST00000413442 HBZP02008 142 aa5.13□□□□□ -1.59
USP54-202ENST00000413442 CTXN2P0C2S0 81 aa5.13□□□□□ -1.59
USP54-202ENST00000413442 OMGP23515 440 aa5.13□□□□□ -1.59
USP54-202ENST00000413442 ZBTB25P24278 435 aa5.13□□□□□ -1.59
USP54-202ENST00000413442 CALRP27797 417 aaKnown RBP5.13□□□□□ -1.59
USP54-202ENST00000413442 FABP5Q01469 135 aa5.13□□□□□ -1.59
USP54-202ENST00000413442 KIR2DS1Q14954 304 aa5.13□□□□□ -1.59
USP54-202ENST00000413442 PLA1AQ53H76 456 aa5.13□□□□□ -1.59
USP54-202ENST00000413442 PRAMEF5Q5TYX0 476 aa5.13□□□□□ -1.59
USP54-202ENST00000413442 SIGIRRQ6IA17 410 aa5.13□□□□□ -1.59
USP54-202ENST00000413442 ZNF880Q6PDB4 577 aa5.13□□□□□ -1.59
USP54-202ENST00000413442 ZNF773Q6PK81 442 aa5.13□□□□□ -1.59
USP54-202ENST00000413442 TREML4Q6UXN2 200 aa5.13□□□□□ -1.59
USP54-202ENST00000413442 IZUMO1Q8IYV9 350 aa5.13□□□□□ -1.59
USP54-202ENST00000413442 DYNAPQ8N1N2 210 aa5.13□□□□□ -1.59
USP54-202ENST00000413442 CHPT1Q8WUD6 406 aa5.13□□□□□ -1.59
USP54-202ENST00000413442 TMEM203Q969S6 136 aa5.13□□□□□ -1.59
USP54-202ENST00000413442 WNT10AQ9GZT5 417 aa5.13□□□□□ -1.59
USP54-202ENST00000413442 TOLLIPQ9H0E2 274 aa5.13□□□□□ -1.59
USP54-202ENST00000413442 LPAR5Q9H1C0 372 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 152.9 ms