RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 TRAPPC2LQ9UL33 140 aa11.59□□□□□ -0.55
NIF3L1-205ENST00000409588 PEX16Q9Y5Y5 336 aa11.59□□□□□ -0.55
NIF3L1-205ENST00000409588 SDCBPO00560 298 aaPredicted RBP11.58□□□□□ -0.56
NIF3L1-205ENST00000409588 PIN1P1O15428 100 aa11.58□□□□□ -0.56
NIF3L1-205ENST00000409588 CRTAPO75718 401 aaPredicted RBP11.58□□□□□ -0.56
NIF3L1-205ENST00000409588 AMY1AP04745 511 aa11.58□□□□□ -0.56
NIF3L1-205ENST00000409588 AMY2AP04746 511 aa11.58□□□□□ -0.56
NIF3L1-205ENST00000409588 MGMTP16455 207 aa11.58□□□□□ -0.56
NIF3L1-205ENST00000409588 LOXL3P58215 753 aa11.58□□□□□ -0.56
NIF3L1-205ENST00000409588 TRAM1Q15629 374 aa11.58□□□□□ -0.56
NIF3L1-205ENST00000409588 NSUN5P1Q3KNT7 163 aa11.58□□□□□ -0.56
NIF3L1-205ENST00000409588 KPRPQ5T749 579 aaPredicted RBP11.58□□□□□ -0.56
NIF3L1-205ENST00000409588 SYT6Q5T7P8 510 aaPredicted RBP11.58□□□□□ -0.56
NIF3L1-205ENST00000409588 DRAM1Q8N682 238 aa11.58□□□□□ -0.56
NIF3L1-205ENST00000409588 WFDC9Q8NEX5 89 aa11.58□□□□□ -0.56
NIF3L1-205ENST00000409588 OR5M11Q96RB7 305 aa11.58□□□□□ -0.56
NIF3L1-205ENST00000409588 ISYNA1Q9NPH2 558 aa11.58□□□□□ -0.56
NIF3L1-205ENST00000409588 GFOD1Q9NXC2 390 aa11.58□□□□□ -0.56
NIF3L1-205ENST00000409588 KCNIP1Q9NZI2 227 aa11.58□□□□□ -0.56
NIF3L1-205ENST00000409588 TSSC4Q9Y5U2 329 aaPredicted RBP11.58□□□□□ -0.56
NIF3L1-205ENST00000409588 CMYA5Q8N3K9 4069 aa11.57□□□□□ -0.56
NIF3L1-205ENST00000409588 PNMA8CA0A1B0GUJ8 204 aa11.57□□□□□ -0.56
NIF3L1-205ENST00000409588 A0A1W2PPI3 338 aa11.57□□□□□ -0.56
NIF3L1-205ENST00000409588 ERICH4A6NGS2 130 aa11.57□□□□□ -0.56
NIF3L1-205ENST00000409588 HSD17B6O14756 317 aa11.57□□□□□ -0.56
NIF3L1-205ENST00000409588 BPNT1O95861 308 aa11.57□□□□□ -0.56
NIF3L1-205ENST00000409588 SNRNP70P08621 437 aaKnown RBP11.57□□□□□ -0.56
NIF3L1-205ENST00000409588 CD37P11049 281 aa11.57□□□□□ -0.56
NIF3L1-205ENST00000409588 TMEM11P17152 192 aa11.57□□□□□ -0.56
NIF3L1-205ENST00000409588 SRMP19623 302 aa11.57□□□□□ -0.56
NIF3L1-205ENST00000409588 PSMA1P25786 263 aaKnown RBP11.57□□□□□ -0.56
NIF3L1-205ENST00000409588 CD1BP29016 333 aa11.57□□□□□ -0.56
NIF3L1-205ENST00000409588 SLC6A1P30531 599 aa11.57□□□□□ -0.56
NIF3L1-205ENST00000409588 HES1Q14469 280 aa11.57□□□□□ -0.56
NIF3L1-205ENST00000409588 LTC4SQ16873 150 aa11.57□□□□□ -0.56
NIF3L1-205ENST00000409588 LY6G6FQ5SQ64 297 aa11.57□□□□□ -0.56
NIF3L1-205ENST00000409588 COMMD1Q8N668 190 aa11.57□□□□□ -0.56
NIF3L1-205ENST00000409588 OR8H1Q8NGG4 311 aa11.57□□□□□ -0.56
NIF3L1-205ENST00000409588 OR56B4Q8NH76 319 aa11.57□□□□□ -0.56
NIF3L1-205ENST00000409588 KCNG3Q8TAE7 436 aa11.57□□□□□ -0.56
NIF3L1-205ENST00000409588 CHPT1Q8WUD6 406 aa11.57□□□□□ -0.56
NIF3L1-205ENST00000409588 CCDC107Q8WV48 283 aa11.57□□□□□ -0.56
NIF3L1-205ENST00000409588 Q96M66 194 aa11.57□□□□□ -0.56
NIF3L1-205ENST00000409588 GON7Q9BXV9 100 aa11.57□□□□□ -0.56
NIF3L1-205ENST00000409588 DUSP21Q9H596 190 aa11.57□□□□□ -0.56
NIF3L1-205ENST00000409588 IGHV1-3A0A0C4DH29 117 aa11.56□□□□□ -0.56
NIF3L1-205ENST00000409588 A0A1W2PP11 408 aa11.56□□□□□ -0.56
NIF3L1-205ENST00000409588 TCRBV4S1A1TA0A5B7 111 aa11.56□□□□□ -0.56
NIF3L1-205ENST00000409588 MAGEA13PA6NCF6 341 aa11.56□□□□□ -0.56
NIF3L1-205ENST00000409588 PDCD6O75340 191 aa11.56□□□□□ -0.56
NIF3L1-205ENST00000409588 GNG10P50151 68 aa11.56□□□□□ -0.56
NIF3L1-205ENST00000409588 ZNF137PP52743 207 aa11.56□□□□□ -0.56
NIF3L1-205ENST00000409588 SLC35A2P78381 396 aa11.56□□□□□ -0.56
NIF3L1-205ENST00000409588 GABPB1Q06547 395 aaPredicted RBP11.56□□□□□ -0.56
NIF3L1-205ENST00000409588 MED22Q15528 200 aa11.56□□□□□ -0.56
NIF3L1-205ENST00000409588 C1orf100Q5SVJ3 147 aa11.56□□□□□ -0.56
NIF3L1-205ENST00000409588 SAMD5Q5TGI4 173 aa11.56□□□□□ -0.56
NIF3L1-205ENST00000409588 OR2T10Q8NGZ9 312 aa11.56□□□□□ -0.56
NIF3L1-205ENST00000409588 LEAP2Q969E1 77 aa11.56□□□□□ -0.56
NIF3L1-205ENST00000409588 ST6GALNAC6Q969X2 333 aa11.56□□□□□ -0.56
NIF3L1-205ENST00000409588 MBNL3Q9NUK0 354 aaKnown RBP11.56□□□□□ -0.56
NIF3L1-205ENST00000409588 TRAV39A0A0B4J263 110 aa11.55□□□□□ -0.56
NIF3L1-205ENST00000409588 ADARB2-AS1A8MUL3 147 aa11.55□□□□□ -0.56
NIF3L1-205ENST00000409588 C12orf77C9JDV5 145 aa11.55□□□□□ -0.56
NIF3L1-205ENST00000409588 RGS11O94810 467 aa11.55□□□□□ -0.56
NIF3L1-205ENST00000409588 DUS4LO95620 317 aaKnown RBP11.55□□□□□ -0.56
NIF3L1-205ENST00000409588 IGHV3-7P01780 117 aa11.55□□□□□ -0.56
NIF3L1-205ENST00000409588 MYF6P23409 242 aa11.55□□□□□ -0.56
NIF3L1-205ENST00000409588 HSPA13P48723 471 aa11.55□□□□□ -0.56
NIF3L1-205ENST00000409588 PSMD7P51665 324 aa11.55□□□□□ -0.56
NIF3L1-205ENST00000409588 SLC35B1P78383 322 aa11.55□□□□□ -0.56
NIF3L1-205ENST00000409588 HTD2P86397 168 aa11.55□□□□□ -0.56
NIF3L1-205ENST00000409588 TPBGQ13641 420 aa11.55□□□□□ -0.56
NIF3L1-205ENST00000409588 BEAN1Q3B7T3 259 aa11.55□□□□□ -0.56
NIF3L1-205ENST00000409588 HSD17B12Q53GQ0 312 aa11.55□□□□□ -0.56
NIF3L1-205ENST00000409588 UTF1Q5T230 341 aa11.55□□□□□ -0.56
NIF3L1-205ENST00000409588 SLC25A48Q6ZT89 311 aaKnown RBP11.55□□□□□ -0.56
NIF3L1-205ENST00000409588 CEACAM19Q7Z692 300 aa11.55□□□□□ -0.56
NIF3L1-205ENST00000409588 MOB3BQ86TA1 216 aa11.55□□□□□ -0.56
NIF3L1-205ENST00000409588 TGIF2LXQ8IUE1 241 aa11.55□□□□□ -0.56
NIF3L1-205ENST00000409588 FOXRED2Q8IWF2 684 aa11.55□□□□□ -0.56
NIF3L1-205ENST00000409588 IZUMO1Q8IYV9 350 aa11.55□□□□□ -0.56
NIF3L1-205ENST00000409588 C5orf56Q8N8D9 126 aa11.55□□□□□ -0.56
NIF3L1-205ENST00000409588 TMEM104Q8NE00 496 aa11.55□□□□□ -0.56
NIF3L1-205ENST00000409588 UFD1Q92890 307 aa11.55□□□□□ -0.56
NIF3L1-205ENST00000409588 NEDD4LQ96PU5 975 aa11.55□□□□□ -0.56
NIF3L1-205ENST00000409588 RIMS4Q9H426 269 aaPredicted RBP11.55□□□□□ -0.56
NIF3L1-205ENST00000409588 BANF2Q9H503 90 aa11.55□□□□□ -0.56
NIF3L1-205ENST00000409588 ZFP57Q9NU63 452 aa11.55□□□□□ -0.56
NIF3L1-205ENST00000409588 ZNF581Q9P0T4 197 aa11.55□□□□□ -0.56
NIF3L1-205ENST00000409588 GNG12Q9UBI6 72 aa11.55□□□□□ -0.56
NIF3L1-205ENST00000409588 LSM2Q9Y333 95 aaKnown RBP11.55□□□□□ -0.56
NIF3L1-205ENST00000409588 ARL6IP5O75915 188 aa11.54□□□□□ -0.56
NIF3L1-205ENST00000409588 IGKV1D-33P01593 117 aa11.54□□□□□ -0.56
NIF3L1-205ENST00000409588 IGKV1-33P01594 117 aa11.54□□□□□ -0.56
NIF3L1-205ENST00000409588 IGHG2P01859 326 aa11.54□□□□□ -0.56
NIF3L1-205ENST00000409588 UCHL1P09936 223 aa11.54□□□□□ -0.56
NIF3L1-205ENST00000409588 IRF3Q14653 427 aa11.54□□□□□ -0.56
NIF3L1-205ENST00000409588 C9orf152Q5JTZ5 239 aa11.54□□□□□ -0.56
NIF3L1-205ENST00000409588 RTN4IP1Q8WWV3 396 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms