RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 HYAL3O43820 417 aaPredicted RBP12.29□□□□□ -0.44
COL4A3-202ENST00000396578 WNT5AP41221 380 aa12.29□□□□□ -0.44
COL4A3-202ENST00000396578 NFAM1Q8NET5 270 aaPredicted RBP12.29□□□□□ -0.44
COL4A3-202ENST00000396578 MYEOVQ96EZ4 313 aa12.29□□□□□ -0.44
COL4A3-202ENST00000396578 DIDO1Q9BTC0 2240 aaKnown RBP12.29□□□□□ -0.44
COL4A3-202ENST00000396578 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.29□□□□□ -0.44
COL4A3-202ENST00000396578 PAXXQ9BUH6 204 aa12.29□□□□□ -0.44
COL4A3-202ENST00000396578 RNF122Q9H9V4 155 aa12.29□□□□□ -0.44
COL4A3-202ENST00000396578 CACNA1DQ01668 2161 aa12.29□□□□□ -0.44
COL4A3-202ENST00000396578 STRCQ7RTU9 1775 aa12.28□□□□□ -0.44
COL4A3-202ENST00000396578 CDC42EP2O14613 210 aa12.28□□□□□ -0.44
COL4A3-202ENST00000396578 SRD5A2P31213 254 aa12.28□□□□□ -0.44
COL4A3-202ENST00000396578 PPP1CCP36873 323 aaKnown RBP12.28□□□□□ -0.44
COL4A3-202ENST00000396578 OR1K1Q8NGR3 316 aa12.28□□□□□ -0.44
COL4A3-202ENST00000396578 FAM131CQ96AQ9 280 aa12.28□□□□□ -0.44
COL4A3-202ENST00000396578 PTPRZ1P23471 2315 aaPredicted RBP12.28□□□□□ -0.44
COL4A3-202ENST00000396578 EDIL3O43854 480 aa12.28□□□□□ -0.44
COL4A3-202ENST00000396578 CYB5R3P00387 301 aaPredicted RBP12.28□□□□□ -0.44
COL4A3-202ENST00000396578 KLF9Q13886 244 aaPredicted RBP12.28□□□□□ -0.44
COL4A3-202ENST00000396578 BHLHA15Q7RTS1 189 aaPredicted RBP12.28□□□□□ -0.44
COL4A3-202ENST00000396578 GLRX2Q9NS18 164 aa12.28□□□□□ -0.44
COL4A3-202ENST00000396578 UQCR10Q9UDW1 63 aa12.28□□□□□ -0.44
COL4A3-202ENST00000396578 TMEM265A0A087WTH1 108 aa12.28□□□□□ -0.44
COL4A3-202ENST00000396578 EMP1P54849 157 aa12.28□□□□□ -0.44
COL4A3-202ENST00000396578 BCL7CQ8WUZ0 217 aaPredicted RBP12.28□□□□□ -0.44
COL4A3-202ENST00000396578 CHRNA10Q9GZZ6 450 aa12.28□□□□□ -0.44
COL4A3-202ENST00000396578 TNFRSF19Q9NS68 423 aa12.28□□□□□ -0.44
COL4A3-202ENST00000396578 AURKAIP1Q9NWT8 199 aaPredicted RBP12.28□□□□□ -0.44
COL4A3-202ENST00000396578 COL22A1Q8NFW1 1626 aaPredicted RBP12.28□□□□□ -0.44
COL4A3-202ENST00000396578 FAM90A27PA6NNH2 459 aa12.28□□□□□ -0.44
COL4A3-202ENST00000396578 ZNF735P0CB33 412 aa12.28□□□□□ -0.44
COL4A3-202ENST00000396578 LYZL2Q7Z4W2 148 aa12.28□□□□□ -0.44
COL4A3-202ENST00000396578 LINC01465Q8N7H1 131 aa12.28□□□□□ -0.44
COL4A3-202ENST00000396578 OR1L8Q8NGR8 309 aa12.28□□□□□ -0.44
COL4A3-202ENST00000396578 A8MWL6 223 aa12.28□□□□□ -0.44
COL4A3-202ENST00000396578 NAT2P11245 290 aa12.28□□□□□ -0.44
COL4A3-202ENST00000396578 GZMHP20718 246 aa12.28□□□□□ -0.44
COL4A3-202ENST00000396578 OR4B1Q8NGF8 309 aa12.28□□□□□ -0.44
COL4A3-202ENST00000396578 HIGD1AQ9Y241 93 aa12.28□□□□□ -0.44
COL4A3-202ENST00000396578 CDX4O14627 284 aaPredicted RBP12.28□□□□□ -0.44
COL4A3-202ENST00000396578 TMIGD3P0DMS9 266 aaPredicted RBP12.28□□□□□ -0.44
COL4A3-202ENST00000396578 ZNF250P15622 560 aa12.28□□□□□ -0.44
COL4A3-202ENST00000396578 RAC3P60763 192 aa12.28□□□□□ -0.44
COL4A3-202ENST00000396578 PLPPR5Q32ZL2 321 aa12.28□□□□□ -0.44
COL4A3-202ENST00000396578 CYB561D1Q8N8Q1 229 aa12.28□□□□□ -0.44
COL4A3-202ENST00000396578 PTP4A1Q93096 173 aa12.28□□□□□ -0.44
COL4A3-202ENST00000396578 AUP1Q9Y679 476 aa12.28□□□□□ -0.44
COL4A3-202ENST00000396578 ZNF519Q8TB69 540 aa12.27□□□□□ -0.44
COL4A3-202ENST00000396578 ZFP64Q9NPA5 681 aa12.27□□□□□ -0.44
COL4A3-202ENST00000396578 ACER2Q5QJU3 275 aa12.27□□□□□ -0.44
COL4A3-202ENST00000396578 SYNGR1O43759 233 aa12.27□□□□□ -0.44
COL4A3-202ENST00000396578 MT-ND6P03923 174 aa12.27□□□□□ -0.44
COL4A3-202ENST00000396578 BCL2P10415 239 aa12.27□□□□□ -0.44
COL4A3-202ENST00000396578 MYF5P13349 255 aa12.27□□□□□ -0.44
COL4A3-202ENST00000396578 ZNF764Q96H86 408 aaPredicted RBP12.27□□□□□ -0.44
COL4A3-202ENST00000396578 TCFL5Q9UL49 500 aa12.27□□□□□ -0.44
COL4A3-202ENST00000396578 RAXQ9Y2V3 346 aa12.27□□□□□ -0.44
COL4A3-202ENST00000396578 OR51B2Q9Y5P1 312 aa12.27□□□□□ -0.44
COL4A3-202ENST00000396578 PLXNB2O15031 1838 aa12.27□□□□□ -0.45
COL4A3-202ENST00000396578 TMSB15BA0A087X1C1 80 aa12.27□□□□□ -0.45
COL4A3-202ENST00000396578 MT-CO3P00414 261 aa12.27□□□□□ -0.45
COL4A3-202ENST00000396578 CD74P04233 296 aa12.27□□□□□ -0.45
COL4A3-202ENST00000396578 HINT1P49773 126 aaPredicted RBP12.27□□□□□ -0.45
COL4A3-202ENST00000396578 SERF2P84101 59 aa12.27□□□□□ -0.45
COL4A3-202ENST00000396578 CALHM1Q8IU99 346 aa12.27□□□□□ -0.45
COL4A3-202ENST00000396578 SLC25A40Q8TBP6 338 aa12.27□□□□□ -0.45
COL4A3-202ENST00000396578 GHITMQ9H3K2 345 aa12.27□□□□□ -0.45
COL4A3-202ENST00000396578 SYT8Q8NBV8 401 aa12.27□□□□□ -0.45
COL4A3-202ENST00000396578 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.27□□□□□ -0.45
COL4A3-202ENST00000396578 FFAR1O14842 300 aa12.27□□□□□ -0.45
COL4A3-202ENST00000396578 NUDT3O95989 172 aa12.27□□□□□ -0.45
COL4A3-202ENST00000396578 APELAP0DMC3 54 aa12.27□□□□□ -0.45
COL4A3-202ENST00000396578 CKS2P33552 79 aa12.27□□□□□ -0.45
COL4A3-202ENST00000396578 TMEM136Q6ZRR5 245 aa12.27□□□□□ -0.45
COL4A3-202ENST00000396578 ANKRD33Q7Z3H0 272 aa12.27□□□□□ -0.45
COL4A3-202ENST00000396578 MSRB3Q8IXL7 192 aa12.27□□□□□ -0.45
COL4A3-202ENST00000396578 MRPL24Q96A35 216 aaKnown RBP12.27□□□□□ -0.45
COL4A3-202ENST00000396578 CCL28Q9NRJ3 127 aa12.27□□□□□ -0.45
COL4A3-202ENST00000396578 KCNMB2Q9Y691 235 aa12.27□□□□□ -0.45
COL4A3-202ENST00000396578 USP54Q70EL1 1684 aa12.27□□□□□ -0.45
COL4A3-202ENST00000396578 IGLV3-16A0A075B6K0 115 aa12.27□□□□□ -0.45
COL4A3-202ENST00000396578 IGHV5-51A0A0C4DH38 117 aa12.27□□□□□ -0.45
COL4A3-202ENST00000396578 GALNSP34059 522 aa12.27□□□□□ -0.45
COL4A3-202ENST00000396578 LNP1A1A4G5 178 aa12.26□□□□□ -0.45
COL4A3-202ENST00000396578 PSG2P11465 335 aa12.26□□□□□ -0.45
COL4A3-202ENST00000396578 CIRBPQ14011 172 aaKnown RBP12.26□□□□□ -0.45
COL4A3-202ENST00000396578 SPEM1Q8N4L4 309 aa12.26□□□□□ -0.45
COL4A3-202ENST00000396578 ZNF385CQ66K41 422 aaPredicted RBP12.26□□□□□ -0.45
COL4A3-202ENST00000396578 OR4D9Q8NGE8 314 aa12.26□□□□□ -0.45
COL4A3-202ENST00000396578 PPM1DO15297 605 aa12.26□□□□□ -0.45
COL4A3-202ENST00000396578 HERPUD1Q15011 391 aa12.26□□□□□ -0.45
COL4A3-202ENST00000396578 PIGYQ3MUY2 71 aa12.26□□□□□ -0.45
COL4A3-202ENST00000396578 ARL6IP6Q8N6S5 226 aa12.26□□□□□ -0.45
COL4A3-202ENST00000396578 ATP6V0CP27449 155 aa12.26□□□□□ -0.45
COL4A3-202ENST00000396578 KIAA0040Q15053 153 aa12.26□□□□□ -0.45
COL4A3-202ENST00000396578 MRPS16Q9Y3D3 137 aaKnown RBP12.26□□□□□ -0.45
COL4A3-202ENST00000396578 MAS1LP35410 378 aa12.26□□□□□ -0.45
COL4A3-202ENST00000396578 ADAMTS17Q8TE56 1095 aa12.26□□□□□ -0.45
COL4A3-202ENST00000396578 TREM2Q9NZC2 230 aa12.26□□□□□ -0.45
COL4A3-202ENST00000396578 J3QR06 171 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms