RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 H0Y980 276 aa8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 MKRN2OSH3BPM6 223 aa8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 CDIPTO14735 213 aa8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 ST8SIA3O43173 380 aa8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 GPR137BO60478 399 aa8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 JTBO76095 146 aa8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 CRYZL1O95825 349 aa8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 MBPP02686 304 aaPredicted RBP8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 ZNF250P15622 560 aa8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 M6PRP20645 277 aa8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 LMO1P25800 156 aa8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 UCP1P25874 307 aa8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 P2RY1P47900 373 aa8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 ALKBH6Q3KRA9 238 aa8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 TIMM23BQ5SRD1 257 aa8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 TMEM268Q5VZI3 342 aa8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 ZNF324BQ6AW86 544 aaPredicted RBP8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 UQCC3Q6UW78 93 aa8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 ZNF818PQ6ZRF7 136 aa8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 RBMXL3Q8N7X1 1067 aaKnown RBP8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 SLC35G3Q8N808 338 aa8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 OR5D13Q8NGL4 314 aa8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 OR4D5Q8NGN0 318 aa8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 PRR7Q8TB68 274 aa8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 AKR1E2Q96JD6 320 aa8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 TP53RKQ96S44 253 aa8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 DMRTA2Q96SC8 542 aa8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 SFXN3Q9BWM7 321 aa8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 PIGMQ9H3S5 423 aa8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 TAAR3PQ9P1P4 343 aa8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 SPEF1Q9Y4P9 236 aa8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 POMT1Q9Y6A1 747 aa8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 RAB19A4D1S5 217 aa8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 SIRPB1O00241 398 aa8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 MLNRO43193 412 aa8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 SCGB1D2O95969 90 aa8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 HAND1O96004 215 aa8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 GRPP07492 148 aa8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 GNMTQ14749 295 aa8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 HMGN3Q15651 99 aa8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 FAM74A1Q5RGS3 127 aa8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 FAM180AQ6UWF9 173 aa8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 C20orf204Q6ZNR8 217 aa8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 FOXRED2Q8IWF2 684 aa8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 STPG2Q8N412 459 aa8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 OR10V1Q8NGI7 309 aa8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 PLPPR1Q8TBJ4 325 aa8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 FAM57AQ8TBR7 257 aa8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 SAT2Q96F10 170 aaPredicted RBP8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 C1QTNF6Q9BXI9 259 aa8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 MBNL3Q9NUK0 354 aaKnown RBP8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 TINAGQ9UJW2 476 aa8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 TRAPPC2LQ9UL33 140 aa8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 FAM215AQ9Y5M1 114 aa8.86□□□□□ -0.99
POLR2J3-201ENST00000379340 IGKV1D-13A0A0B4J2D9 117 aa8.85□□□□□ -0.99
POLR2J3-201ENST00000379340 TMEM30CPA0ZSE6 113 aa8.85□□□□□ -0.99
POLR2J3-201ENST00000379340 H0YL77 283 aa8.85□□□□□ -0.99
POLR2J3-201ENST00000379340 TEX46H3BTG2 121 aa8.85□□□□□ -0.99
POLR2J3-201ENST00000379340 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.85□□□□□ -0.99
POLR2J3-201ENST00000379340 IFNL4K9M1U5 179 aa8.85□□□□□ -0.99
POLR2J3-201ENST00000379340 KCNAB3O43448 404 aa8.85□□□□□ -0.99
POLR2J3-201ENST00000379340 IGKV1-13P0DP09 117 aa8.85□□□□□ -0.99
POLR2J3-201ENST00000379340 MMP9P14780 707 aa8.85□□□□□ -0.99
POLR2J3-201ENST00000379340 PVALBP20472 110 aaPredicted RBP8.85□□□□□ -0.99
POLR2J3-201ENST00000379340 VDAC1P21796 283 aa8.85□□□□□ -0.99
POLR2J3-201ENST00000379340 CEACAM8P31997 349 aaPredicted RBP8.85□□□□□ -0.99
POLR2J3-201ENST00000379340 SLC35E4Q6ICL7 350 aa8.85□□□□□ -0.99
POLR2J3-201ENST00000379340 MEX3BQ6ZN04 569 aaKnown RBP8.85□□□□□ -0.99
POLR2J3-201ENST00000379340 SELENOHQ8IZQ5 122 aaKnown RBP8.85□□□□□ -0.99
POLR2J3-201ENST00000379340 OR10Z1Q8NGY1 313 aa8.85□□□□□ -0.99
POLR2J3-201ENST00000379340 LHFPL5Q8TAF8 219 aa8.85□□□□□ -0.99
POLR2J3-201ENST00000379340 SEBOXQ9HB31 216 aaPredicted RBP8.85□□□□□ -0.99
POLR2J3-201ENST00000379340 TAF9BQ9HBM6 251 aa8.85□□□□□ -0.99
POLR2J3-201ENST00000379340 CCL28Q9NRJ3 127 aa8.85□□□□□ -0.99
POLR2J3-201ENST00000379340 TAS2R3Q9NYW6 316 aa8.85□□□□□ -0.99
POLR2J3-201ENST00000379340 KCNIP1Q9NZI2 227 aa8.85□□□□□ -0.99
POLR2J3-201ENST00000379340 CACNA1DQ01668 2161 aa8.84□□□□□ -0.99
POLR2J3-201ENST00000379340 BORCS7-ASMTA0A0B4J1R7 106 aa8.84□□□□□ -0.99
POLR2J3-201ENST00000379340 HSD17B6O14756 317 aa8.84□□□□□ -0.99
POLR2J3-201ENST00000379340 PGLYRP1O75594 196 aaPredicted RBP8.84□□□□□ -0.99
POLR2J3-201ENST00000379340 SLC25A6P12236 298 aa8.84□□□□□ -0.99
POLR2J3-201ENST00000379340 RCC1P18754 421 aaPredicted RBP8.84□□□□□ -0.99
POLR2J3-201ENST00000379340 F2RP25116 425 aa8.84□□□□□ -0.99
POLR2J3-201ENST00000379340 CD200P41217 278 aa8.84□□□□□ -0.99
POLR2J3-201ENST00000379340 SMIM21Q3B7S5 101 aa8.84□□□□□ -0.99
POLR2J3-201ENST00000379340 ACP7Q6ZNF0 438 aa8.84□□□□□ -0.99
POLR2J3-201ENST00000379340 C11orf53Q8IXP5 236 aa8.84□□□□□ -0.99
POLR2J3-201ENST00000379340 UBAC2Q8NBM4 344 aa8.84□□□□□ -0.99
POLR2J3-201ENST00000379340 ARL11Q969Q4 196 aa8.84□□□□□ -0.99
POLR2J3-201ENST00000379340 MARC2Q969Z3 335 aa8.84□□□□□ -0.99
POLR2J3-201ENST00000379340 MUCL1Q96DR8 90 aa8.84□□□□□ -0.99
POLR2J3-201ENST00000379340 LINC00052Q96N35 136 aa8.84□□□□□ -0.99
POLR2J3-201ENST00000379340 USB1Q9BQ65 265 aaKnown RBP8.84□□□□□ -0.99
POLR2J3-201ENST00000379340 TOLLIPQ9H0E2 274 aa8.84□□□□□ -0.99
POLR2J3-201ENST00000379340 FBXL17Q9UF56 701 aa8.84□□□□□ -0.99
POLR2J3-201ENST00000379340 SHANK1Q9Y566 2161 aa8.84□□□□□ -0.99
POLR2J3-201ENST00000379340 OOEPA6NGQ2 149 aa8.83□□□□□ -1
POLR2J3-201ENST00000379340 A6NLC8 198 aa8.83□□□□□ -1
POLR2J3-201ENST00000379340 RNF212BA8MTL3 300 aa8.83□□□□□ -1
POLR2J3-201ENST00000379340 PTBP3O95758 552 aaKnown RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms