RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 ZNF134P52741 427 aa10.74□□□□□ -0.69
CXCL12-202ENST00000374426 ZNF137PP52743 207 aa10.74□□□□□ -0.69
CXCL12-202ENST00000374426 GBX2P52951 348 aaPredicted RBP10.74□□□□□ -0.69
CXCL12-202ENST00000374426 KIAA0141Q14154 515 aaPredicted RBP10.74□□□□□ -0.69
CXCL12-202ENST00000374426 Q3ZCU0 254 aa10.74□□□□□ -0.69
CXCL12-202ENST00000374426 KLHL22Q53GT1 634 aa10.74□□□□□ -0.69
CXCL12-202ENST00000374426 ASPHD1Q5U4P2 390 aa10.74□□□□□ -0.69
CXCL12-202ENST00000374426 XAF1Q6GPH4 301 aa10.74□□□□□ -0.69
CXCL12-202ENST00000374426 ZNF497Q6ZNH5 498 aa10.74□□□□□ -0.69
CXCL12-202ENST00000374426 SLC25A48Q6ZT89 311 aaKnown RBP10.74□□□□□ -0.69
CXCL12-202ENST00000374426 ZNF439Q8NDP4 499 aa10.74□□□□□ -0.69
CXCL12-202ENST00000374426 PYDC1Q8WXC3 89 aa10.74□□□□□ -0.69
CXCL12-202ENST00000374426 METTL9Q9H1A3 318 aa10.74□□□□□ -0.69
CXCL12-202ENST00000374426 KLK15Q9H2R5 256 aa10.74□□□□□ -0.69
CXCL12-202ENST00000374426 ING4Q9UNL4 249 aa10.74□□□□□ -0.69
CXCL12-202ENST00000374426 CSMD3Q7Z407 3707 aa10.73□□□□□ -0.69
CXCL12-202ENST00000374426 A0A1W2PP11 408 aa10.73□□□□□ -0.69
CXCL12-202ENST00000374426 C12orf77C9JDV5 145 aa10.73□□□□□ -0.69
CXCL12-202ENST00000374426 I3L521 148 aa10.73□□□□□ -0.69
CXCL12-202ENST00000374426 AIPO00170 330 aa10.73□□□□□ -0.69
CXCL12-202ENST00000374426 TXNL1O43396 289 aa10.73□□□□□ -0.69
CXCL12-202ENST00000374426 CSTBP04080 98 aaKnown RBP10.73□□□□□ -0.69
CXCL12-202ENST00000374426 CD2P06729 351 aa10.73□□□□□ -0.69
CXCL12-202ENST00000374426 SLC2A2P11168 524 aaPredicted RBP10.73□□□□□ -0.69
CXCL12-202ENST00000374426 SERPINA2P20848 420 aa10.73□□□□□ -0.69
CXCL12-202ENST00000374426 ZNF93P35789 620 aaPredicted RBP10.73□□□□□ -0.69
CXCL12-202ENST00000374426 INSL3P51460 131 aa10.73□□□□□ -0.69
CXCL12-202ENST00000374426 ALDH3A2P51648 485 aa10.73□□□□□ -0.69
CXCL12-202ENST00000374426 RAB40BQ12829 278 aa10.73□□□□□ -0.69
CXCL12-202ENST00000374426 MPV17LQ2QL34 196 aa10.73□□□□□ -0.69
CXCL12-202ENST00000374426 CT45A1Q5HYN5 189 aa10.73□□□□□ -0.69
CXCL12-202ENST00000374426 ATAD3CQ5T2N8 411 aa10.73□□□□□ -0.69
CXCL12-202ENST00000374426 CASC10Q5T4H9 136 aa10.73□□□□□ -0.69
CXCL12-202ENST00000374426 DDI2Q5TDH0 399 aa10.73□□□□□ -0.69
CXCL12-202ENST00000374426 LINC00596Q86U02 117 aa10.73□□□□□ -0.69
CXCL12-202ENST00000374426 OR52I1Q8NGK6 324 aa10.73□□□□□ -0.69
CXCL12-202ENST00000374426 CT45A3Q8NHU0 189 aa10.73□□□□□ -0.69
CXCL12-202ENST00000374426 RHOXF1Q8NHV9 184 aa10.73□□□□□ -0.69
CXCL12-202ENST00000374426 MUC7Q8TAX7 377 aa10.73□□□□□ -0.69
CXCL12-202ENST00000374426 GPR148Q8TDV2 347 aa10.73□□□□□ -0.69
CXCL12-202ENST00000374426 TMEM106AQ96A25 262 aa10.73□□□□□ -0.69
CXCL12-202ENST00000374426 LYSTQ99698 3801 aa10.73□□□□□ -0.69
CXCL12-202ENST00000374426 GNB4Q9HAV0 340 aa10.73□□□□□ -0.69
CXCL12-202ENST00000374426 TMEM138Q9NPI0 162 aa10.73□□□□□ -0.69
CXCL12-202ENST00000374426 ZNF107Q9UII5 783 aaPredicted RBP10.73□□□□□ -0.69
CXCL12-202ENST00000374426 GMPPBQ9Y5P6 360 aa10.73□□□□□ -0.69
CXCL12-202ENST00000374426 SMAD5-AS1Q9Y6J3 95 aa10.73□□□□□ -0.69
CXCL12-202ENST00000374426 DNAH1Q9P2D7 4330 aa10.73□□□□□ -0.69
CXCL12-202ENST00000374426 STARD9Q9P2P6 4700 aa10.72□□□□□ -0.69
CXCL12-202ENST00000374426 LY86O95711 162 aa10.72□□□□□ -0.69
CXCL12-202ENST00000374426 LIMS3P0CW19 117 aa10.72□□□□□ -0.69
CXCL12-202ENST00000374426 LIMS4P0CW20 117 aa10.72□□□□□ -0.69
CXCL12-202ENST00000374426 OR5H8P0DN80 308 aa10.72□□□□□ -0.69
CXCL12-202ENST00000374426 PPIFP30405 207 aaKnown RBP10.72□□□□□ -0.69
CXCL12-202ENST00000374426 RASSF2P50749 326 aa10.72□□□□□ -0.69
CXCL12-202ENST00000374426 SBSPONQ8IVN8 264 aa10.72□□□□□ -0.69
CXCL12-202ENST00000374426 OR10V1Q8NGI7 309 aa10.72□□□□□ -0.69
CXCL12-202ENST00000374426 NEK7Q8TDX7 302 aa10.72□□□□□ -0.69
CXCL12-202ENST00000374426 ORAI1Q96D31 301 aa10.72□□□□□ -0.69
CXCL12-202ENST00000374426 UBE2E2Q96LR5 201 aa10.72□□□□□ -0.69
CXCL12-202ENST00000374426 PAK1IP1Q9NWT1 392 aaPredicted RBP10.72□□□□□ -0.69
CXCL12-202ENST00000374426 GNG12Q9UBI6 72 aa10.72□□□□□ -0.69
CXCL12-202ENST00000374426 BIRC6Q9NR09 4857 aa10.72□□□□□ -0.69
CXCL12-202ENST00000374426 G3V318 75 aa10.71□□□□□ -0.69
CXCL12-202ENST00000374426 H3BNX3 289 aa10.71□□□□□ -0.69
CXCL12-202ENST00000374426 OR8U8P0C7N1 319 aa10.71□□□□□ -0.69
CXCL12-202ENST00000374426 GTF2F2P13984 249 aa10.71□□□□□ -0.69
CXCL12-202ENST00000374426 MYF6P23409 242 aa10.71□□□□□ -0.69
CXCL12-202ENST00000374426 GNB1P62873 340 aa10.71□□□□□ -0.69
CXCL12-202ENST00000374426 PPP3R1P63098 170 aa10.71□□□□□ -0.69
CXCL12-202ENST00000374426 RUNX1Q01196 453 aa10.71□□□□□ -0.69
CXCL12-202ENST00000374426 ZNF616Q08AN1 781 aa10.71□□□□□ -0.69
CXCL12-202ENST00000374426 LSAMPQ13449 338 aa10.71□□□□□ -0.69
CXCL12-202ENST00000374426 MMDQ15546 238 aa10.71□□□□□ -0.69
CXCL12-202ENST00000374426 SLC22A6Q4U2R8 563 aa10.71□□□□□ -0.69
CXCL12-202ENST00000374426 SYT6Q5T7P8 510 aaPredicted RBP10.71□□□□□ -0.69
CXCL12-202ENST00000374426 STX19Q8N4C7 294 aa10.71□□□□□ -0.69
CXCL12-202ENST00000374426 CBR4Q8N4T8 237 aa10.71□□□□□ -0.69
CXCL12-202ENST00000374426 ZNF491Q8N8L2 437 aa10.71□□□□□ -0.69
CXCL12-202ENST00000374426 OR1N2Q8NGR9 330 aa10.71□□□□□ -0.69
CXCL12-202ENST00000374426 Q96MT0 163 aa10.71□□□□□ -0.69
CXCL12-202ENST00000374426 RCHY1Q96PM5 261 aa10.71□□□□□ -0.69
CXCL12-202ENST00000374426 OR5B12Q96R08 314 aa10.71□□□□□ -0.69
CXCL12-202ENST00000374426 S100A13Q99584 98 aa10.71□□□□□ -0.69
CXCL12-202ENST00000374426 CHCHD6Q9BRQ6 235 aa10.71□□□□□ -0.69
CXCL12-202ENST00000374426 MRPS18AQ9NVS2 196 aaKnown RBP10.71□□□□□ -0.69
CXCL12-202ENST00000374426 RCC2Q9P258 522 aaKnown RBP10.71□□□□□ -0.69
CXCL12-202ENST00000374426 VSIG4Q9Y279 399 aa10.71□□□□□ -0.69
CXCL12-202ENST00000374426 WSB1Q9Y6I7 421 aa10.71□□□□□ -0.69
CXCL12-202ENST00000374426 MAGEA13PA6NCF6 341 aa10.7□□□□□ -0.7
CXCL12-202ENST00000374426 ATP6V0E1O15342 81 aa10.7□□□□□ -0.7
CXCL12-202ENST00000374426 SPINT2O43291 252 aa10.7□□□□□ -0.7
CXCL12-202ENST00000374426 LANCL1O43813 399 aa10.7□□□□□ -0.7
CXCL12-202ENST00000374426 ZNF780AO75290 641 aaPredicted RBP10.7□□□□□ -0.7
CXCL12-202ENST00000374426 IGLV1-40P01703 118 aa10.7□□□□□ -0.7
CXCL12-202ENST00000374426 HBZP02008 142 aa10.7□□□□□ -0.7
CXCL12-202ENST00000374426 BDKRB2P30411 391 aa10.7□□□□□ -0.7
CXCL12-202ENST00000374426 TMEM30BQ3MIR4 351 aa10.7□□□□□ -0.7
CXCL12-202ENST00000374426 CCDC58Q4VC31 144 aa10.7□□□□□ -0.7
CXCL12-202ENST00000374426 STEAP3Q658P3 488 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms