RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 CELA2AP08217 269 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 GNG4P50150 75 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 PMP22Q01453 160 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 TMEM241Q24JQ0 296 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 CD200R1LQ6Q8B3 271 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 PDPNQ86YL7 162 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 SIGLECL1Q8N7X8 197 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 ABHD14AQ9BUJ0 271 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 RNF115Q9Y4L5 304 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 TMEM229AB2RXF0 380 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 GCM2O75603 506 aaPredicted RBP4.22□□□□□ -1.73
SCN3A-202ENST00000360093 ORM1P02763 201 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 KIR3DL2P43630 455 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 SULT1A1P50225 295 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 LGALSLQ3ZCW2 172 aaPredicted RBP4.22□□□□□ -1.73
SCN3A-202ENST00000360093 SLC25A53Q5H9E4 307 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 ZNF429Q86V71 674 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 ZPLD1Q8TCW7 415 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 MIXL1Q9H2W2 232 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 OR1A1Q9P1Q5 309 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 TANC1Q9C0D5 1861 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 H0Y980 276 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 DNASE2O00115 360 aaPredicted RBP4.22□□□□□ -1.73
SCN3A-202ENST00000360093 MPDU1O75352 247 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 ZNF737O75373 536 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 GAPDHP04406 335 aaKnown RBP4.22□□□□□ -1.73
SCN3A-202ENST00000360093 SLC25A5P05141 298 aaKnown RBP4.22□□□□□ -1.73
SCN3A-202ENST00000360093 DYNLT3P51808 116 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 TMEM33P57088 247 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 RPS4XP62701 263 aaKnown RBP4.22□□□□□ -1.73
SCN3A-202ENST00000360093 AANATQ16613 207 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 ZNF645Q8N7E2 425 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 OR10AC1Q8NH08 325 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 DTD1Q8TEA8 209 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 TMEM18Q96B42 140 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 ANAPC16Q96DE5 110 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 WSB1Q9Y6I7 421 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 MAP1LC3B2A6NCE7 125 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 B4DEV8 164 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 B9A039 149 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 FAM106CPP0CH98 169 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 AESQ08117 197 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 CALHM1Q8IU99 346 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 OR2V2Q96R30 315 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 MAP1LC3BQ9GZQ8 125 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 MSL2Q9HCI7 577 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 FAM206AQ9NX38 181 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 ICE1Q9Y2F5 2266 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 C4orf51C9J302 202 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 IL11P20809 199 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 PAFAH1B2P68402 229 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 UNQ9370/PRO34162Q6UXP9 181 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 APCDD1LQ8NCL9 501 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 PCNPQ8WW12 178 aaKnown RBP4.22□□□□□ -1.73
SCN3A-202ENST00000360093 NEURL2Q9BR09 285 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 FBXL17Q9UF56 701 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 LHFPL6Q9Y693 200 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 CHCHD2Q9Y6H1 151 aaPredicted RBP4.22□□□□□ -1.73
SCN3A-202ENST00000360093 MDC1Q14676 2089 aaKnown RBP4.21□□□□□ -1.73
SCN3A-202ENST00000360093 SEC14L6B5MCN3 397 aa4.21□□□□□ -1.73
SCN3A-202ENST00000360093 HYAL3O43820 417 aaPredicted RBP4.21□□□□□ -1.73
SCN3A-202ENST00000360093 DEFA6Q01524 100 aa4.21□□□□□ -1.73
SCN3A-202ENST00000360093 ZNF260Q3ZCT1 412 aa4.21□□□□□ -1.73
SCN3A-202ENST00000360093 KHDC3LQ587J8 217 aa4.21□□□□□ -1.73
SCN3A-202ENST00000360093 DHRS7BQ6IAN0 325 aaPredicted RBP4.21□□□□□ -1.73
SCN3A-202ENST00000360093 WDR73Q6P4I2 378 aa4.21□□□□□ -1.73
SCN3A-202ENST00000360093 TEPPQ6URK8 271 aa4.21□□□□□ -1.73
SCN3A-202ENST00000360093 RELL2Q8NC24 303 aaPredicted RBP4.21□□□□□ -1.73
SCN3A-202ENST00000360093 PIMREGQ9BSJ6 248 aa4.21□□□□□ -1.73
SCN3A-202ENST00000360093 OPN3Q9H1Y3 402 aaPredicted RBP4.21□□□□□ -1.73
SCN3A-202ENST00000360093 CISD1Q9NZ45 108 aaKnown RBP4.21□□□□□ -1.73
SCN3A-202ENST00000360093 KLHDC2Q9Y2U9 406 aa4.21□□□□□ -1.73
SCN3A-202ENST00000360093 CACNA1IQ9P0X4 2223 aa4.21□□□□□ -1.73
SCN3A-202ENST00000360093 APC2O95996 2303 aa4.21□□□□□ -1.73
SCN3A-202ENST00000360093 ZDBF2Q9HCK1 2354 aa4.21□□□□□ -1.73
SCN3A-202ENST00000360093 CHST1O43916 411 aa4.21□□□□□ -1.74
SCN3A-202ENST00000360093 PDE6DO43924 150 aa4.21□□□□□ -1.74
SCN3A-202ENST00000360093 FCGR3AP08637 254 aa4.21□□□□□ -1.74
SCN3A-202ENST00000360093 SFTA3P0C7M3 94 aa4.21□□□□□ -1.74
SCN3A-202ENST00000360093 ATP5IP56385 69 aaPredicted RBP4.21□□□□□ -1.74
SCN3A-202ENST00000360093 ZNF658BQ4V348 819 aaPredicted RBP4.21□□□□□ -1.74
SCN3A-202ENST00000360093 ANGPTL6Q8NI99 470 aa4.21□□□□□ -1.74
SCN3A-202ENST00000360093 PLPPR2Q96GM1 343 aa4.21□□□□□ -1.74
SCN3A-202ENST00000360093 IMMP1LQ96LU5 166 aa4.21□□□□□ -1.74
SCN3A-202ENST00000360093 CCL28Q9NRJ3 127 aa4.21□□□□□ -1.74
SCN3A-202ENST00000360093 PITPNC1Q9UKF7 332 aa4.21□□□□□ -1.74
SCN3A-202ENST00000360093 LOC102723996A0A087X1L8 192 aa4.21□□□□□ -1.74
SCN3A-202ENST00000360093 TRBV5-7A0A0A0MS05 114 aa4.21□□□□□ -1.74
SCN3A-202ENST00000360093 ZNF320A2RRD8 509 aa4.21□□□□□ -1.74
SCN3A-202ENST00000360093 RECKO95980 971 aa4.21□□□□□ -1.74
SCN3A-202ENST00000360093 CFDP00746 253 aaPredicted RBP4.21□□□□□ -1.74
SCN3A-202ENST00000360093 ADRA2AP08913 450 aa4.21□□□□□ -1.74
SCN3A-202ENST00000360093 NPY1RP25929 384 aa4.21□□□□□ -1.74
SCN3A-202ENST00000360093 MPV17P39210 176 aa4.21□□□□□ -1.74
SCN3A-202ENST00000360093 TPRP12270 2363 aaKnown RBP4.21□□□□□ -1.74
SCN3A-202ENST00000360093 GLRXP35754 106 aa4.21□□□□□ -1.74
SCN3A-202ENST00000360093 POLR2GP62487 172 aaKnown RBP eCLIP4.21□□□□□ -1.74
SCN3A-202ENST00000360093 MRPL14Q6P1L8 145 aaKnown RBP4.21□□□□□ -1.74
SCN3A-202ENST00000360093 FDCSPQ8NFU4 85 aa4.21□□□□□ -1.74
SCN3A-202ENST00000360093 ADAMTS17Q8TE56 1095 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms