RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 TVP23CQ96ET8 276 aa7.41□□□□□ -1.22
CLK1-201ENST00000321356 MIOXQ9UGB7 285 aa7.41□□□□□ -1.22
CLK1-201ENST00000321356 MMP24Q9Y5R2 645 aa7.41□□□□□ -1.22
CLK1-201ENST00000321356 FREM2Q5SZK8 3169 aa7.41□□□□□ -1.22
CLK1-201ENST00000321356 LRP5LA4QPB2 252 aa7.41□□□□□ -1.22
CLK1-201ENST00000321356 OR5B21A6NL26 309 aa7.41□□□□□ -1.22
CLK1-201ENST00000321356 IFITM10A6NMD0 228 aa7.41□□□□□ -1.22
CLK1-201ENST00000321356 B4DEV8 164 aa7.41□□□□□ -1.22
CLK1-201ENST00000321356 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.41□□□□□ -1.22
CLK1-201ENST00000321356 SLC33A1O00400 549 aaPredicted RBP7.41□□□□□ -1.22
CLK1-201ENST00000321356 DEGS1O15121 323 aa7.41□□□□□ -1.22
CLK1-201ENST00000321356 ZNHIT1O43257 154 aa7.41□□□□□ -1.22
CLK1-201ENST00000321356 TNFSF12O43508 249 aa7.41□□□□□ -1.22
CLK1-201ENST00000321356 NEURL1O76050 574 aa7.41□□□□□ -1.22
CLK1-201ENST00000321356 NXPH3O95157 252 aa7.41□□□□□ -1.22
CLK1-201ENST00000321356 CER1O95813 267 aa7.41□□□□□ -1.22
CLK1-201ENST00000321356 IGKV1-39P01597 117 aa7.41□□□□□ -1.22
CLK1-201ENST00000321356 IGLV2-14P01704 120 aa7.41□□□□□ -1.22
CLK1-201ENST00000321356 IGHV2-70P01814 119 aa7.41□□□□□ -1.22
CLK1-201ENST00000321356 IGKV1D-39P04432 117 aa7.41□□□□□ -1.22
CLK1-201ENST00000321356 PSG2P11465 335 aa7.41□□□□□ -1.22
CLK1-201ENST00000321356 ARR3P36575 388 aa7.41□□□□□ -1.22
CLK1-201ENST00000321356 RPS10P46783 165 aaKnown RBP7.41□□□□□ -1.22
CLK1-201ENST00000321356 GLIPR1P48060 266 aa7.41□□□□□ -1.22
CLK1-201ENST00000321356 ERVFRD-1P60508 538 aa7.41□□□□□ -1.22
CLK1-201ENST00000321356 RAB2AP61019 212 aa7.41□□□□□ -1.22
CLK1-201ENST00000321356 RPL23AP62750 156 aaKnown RBP7.41□□□□□ -1.22
CLK1-201ENST00000321356 ACSF3Q4G176 576 aaPredicted RBP7.41□□□□□ -1.22
CLK1-201ENST00000321356 NCMAPQ5T1S8 102 aa7.41□□□□□ -1.22
CLK1-201ENST00000321356 DCAF12Q5T6F0 453 aa7.41□□□□□ -1.22
CLK1-201ENST00000321356 C9orf135Q5VTT2 229 aa7.41□□□□□ -1.22
CLK1-201ENST00000321356 Q6ZRM9 215 aa7.41□□□□□ -1.22
CLK1-201ENST00000321356 ZNF573Q86YE8 665 aa7.41□□□□□ -1.22
CLK1-201ENST00000321356 TUSC5Q8IXB3 177 aa7.41□□□□□ -1.22
CLK1-201ENST00000321356 OR10J5Q8NHC4 309 aa7.41□□□□□ -1.22
CLK1-201ENST00000321356 HIST1H2AAQ96QV6 131 aa7.41□□□□□ -1.22
CLK1-201ENST00000321356 FAM173AQ9BQD7 235 aa7.41□□□□□ -1.22
CLK1-201ENST00000321356 NIPSNAP3BQ9BS92 247 aa7.41□□□□□ -1.22
CLK1-201ENST00000321356 LRFN1Q9P244 771 aa7.41□□□□□ -1.22
CLK1-201ENST00000321356 MPC1Q9Y5U8 109 aa7.41□□□□□ -1.22
CLK1-201ENST00000321356 TNRC18O15417 2968 aaPredicted RBP7.4□□□□□ -1.22
CLK1-201ENST00000321356 LILRA1O75019 489 aa7.4□□□□□ -1.23
CLK1-201ENST00000321356 IFNA5P01569 189 aa7.4□□□□□ -1.23
CLK1-201ENST00000321356 SERPINE2P07093 398 aa7.4□□□□□ -1.23
CLK1-201ENST00000321356 CELA3AP09093 270 aa7.4□□□□□ -1.23
CLK1-201ENST00000321356 CXCL1P09341 107 aa7.4□□□□□ -1.23
CLK1-201ENST00000321356 CDX1P47902 265 aaPredicted RBP7.4□□□□□ -1.23
CLK1-201ENST00000321356 GNG3P63215 75 aa7.4□□□□□ -1.23
CLK1-201ENST00000321356 FAM90A2PQ658T7 463 aa7.4□□□□□ -1.23
CLK1-201ENST00000321356 SPINK14Q6IE38 97 aa7.4□□□□□ -1.23
CLK1-201ENST00000321356 ZNF343Q6P1L6 599 aa7.4□□□□□ -1.23
CLK1-201ENST00000321356 C6orf15Q6UXA7 325 aaPredicted RBP7.4□□□□□ -1.23
CLK1-201ENST00000321356 THNSL2Q86YJ6 484 aa7.4□□□□□ -1.23
CLK1-201ENST00000321356 FAM58AQ8N1B3 248 aa7.4□□□□□ -1.23
CLK1-201ENST00000321356 MBD3L1Q8WWY6 194 aa7.4□□□□□ -1.23
CLK1-201ENST00000321356 EDARADDQ8WWZ3 215 aa7.4□□□□□ -1.23
CLK1-201ENST00000321356 ZNF488Q96MN9 340 aa7.4□□□□□ -1.23
CLK1-201ENST00000321356 PSMG3Q9BT73 122 aaPredicted RBP7.4□□□□□ -1.23
CLK1-201ENST00000321356 PKIBQ9C010 78 aa7.4□□□□□ -1.23
CLK1-201ENST00000321356 RPRMQ9NS64 109 aa7.4□□□□□ -1.23
CLK1-201ENST00000321356 DLL3Q9NYJ7 618 aa7.4□□□□□ -1.23
CLK1-201ENST00000321356 ERRFI1Q9UJM3 462 aaPredicted RBP7.4□□□□□ -1.23
CLK1-201ENST00000321356 ESPL1Q14674 2120 aa7.39□□□□□ -1.23
CLK1-201ENST00000321356 ARHGAP21Q5T5U3 1957 aa7.39□□□□□ -1.23
CLK1-201ENST00000321356 H3BP45 60 aa7.39□□□□□ -1.23
CLK1-201ENST00000321356 CNOT4O95628 575 aaKnown RBP7.39□□□□□ -1.23
CLK1-201ENST00000321356 F10P00742 488 aa7.39□□□□□ -1.23
CLK1-201ENST00000321356 IGKV1-5P01602 117 aa7.39□□□□□ -1.23
CLK1-201ENST00000321356 WNT5AP41221 380 aa7.39□□□□□ -1.23
CLK1-201ENST00000321356 TMEM267Q0VDI3 215 aaPredicted RBP7.39□□□□□ -1.23
CLK1-201ENST00000321356 TESK1Q15569 626 aa7.39□□□□□ -1.23
CLK1-201ENST00000321356 ZNF726P1Q15940 193 aa7.39□□□□□ -1.23
CLK1-201ENST00000321356 Q6P435 159 aa7.39□□□□□ -1.23
CLK1-201ENST00000321356 MOB1BQ7L9L4 216 aa7.39□□□□□ -1.23
CLK1-201ENST00000321356 HAPLN4Q86UW8 402 aa7.39□□□□□ -1.23
CLK1-201ENST00000321356 UBALD2Q8IYN6 164 aa7.39□□□□□ -1.23
CLK1-201ENST00000321356 ZNF525Q8N782 197 aa7.39□□□□□ -1.23
CLK1-201ENST00000321356 ZNF610Q8N9Z0 462 aa7.39□□□□□ -1.23
CLK1-201ENST00000321356 OR10V1Q8NGI7 309 aa7.39□□□□□ -1.23
CLK1-201ENST00000321356 OR13D1Q8NGV5 346 aa7.39□□□□□ -1.23
CLK1-201ENST00000321356 OR51H1Q8NH63 302 aa7.39□□□□□ -1.23
CLK1-201ENST00000321356 RDH5Q92781 318 aa7.39□□□□□ -1.23
CLK1-201ENST00000321356 GGACTQ9BVM4 153 aa7.39□□□□□ -1.23
CLK1-201ENST00000321356 SPRY4Q9C004 299 aa7.39□□□□□ -1.23
CLK1-201ENST00000321356 TOLLIPQ9H0E2 274 aa7.39□□□□□ -1.23
CLK1-201ENST00000321356 OR51I2Q9H344 312 aa7.39□□□□□ -1.23
CLK1-201ENST00000321356 PRO3102Q9H379 93 aa7.39□□□□□ -1.23
CLK1-201ENST00000321356 TMEM242Q9NWH2 141 aa7.39□□□□□ -1.23
CLK1-201ENST00000321356 CISD1Q9NZ45 108 aaKnown RBP7.39□□□□□ -1.23
CLK1-201ENST00000321356 TREM2Q9NZC2 230 aa7.39□□□□□ -1.23
CLK1-201ENST00000321356 DOK5Q9P104 306 aa7.39□□□□□ -1.23
CLK1-201ENST00000321356 RNF150Q9ULK6 438 aa7.39□□□□□ -1.23
CLK1-201ENST00000321356 DMDP11532 3685 aa7.39□□□□□ -1.23
CLK1-201ENST00000321356 ANKRD30BLA7E2S9 258 aa7.38□□□□□ -1.23
CLK1-201ENST00000321356 J3QT63 122 aa7.38□□□□□ -1.23
CLK1-201ENST00000321356 HS3ST1O14792 307 aa7.38□□□□□ -1.23
CLK1-201ENST00000321356 SYNGR2O43760 224 aa7.38□□□□□ -1.23
CLK1-201ENST00000321356 YIF1AO95070 293 aa7.38□□□□□ -1.23
CLK1-201ENST00000321356 SYNGR4O95473 234 aa7.38□□□□□ -1.23
CLK1-201ENST00000321356 BCL2P10415 239 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms