RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 C16orf97H3BN30 126 aa10.09□□□□□ -0.79
LAMA4-201ENST00000230538 CDK2AP1O14519 115 aa10.09□□□□□ -0.79
LAMA4-201ENST00000230538 SPINT1O43278 529 aa10.09□□□□□ -0.79
LAMA4-201ENST00000230538 CLDN18P56856 261 aa10.09□□□□□ -0.79
LAMA4-201ENST00000230538 ADAT3Q96EY9 351 aaPredicted RBP10.09□□□□□ -0.79
LAMA4-201ENST00000230538 CLN8Q9UBY8 286 aa10.09□□□□□ -0.79
LAMA4-201ENST00000230538 IER3P46695 156 aa10.08□□□□□ -0.8
LAMA4-201ENST00000230538 DLX1P56177 255 aa10.08□□□□□ -0.8
LAMA4-201ENST00000230538 SRSF9Q13242 221 aaKnown RBP eCLIP10.08□□□□□ -0.8
LAMA4-201ENST00000230538 ISXQ2M1V0 245 aa10.08□□□□□ -0.8
LAMA4-201ENST00000230538 STXBP6Q8NFX7 210 aa10.08□□□□□ -0.8
LAMA4-201ENST00000230538 ZPLD1Q8TCW7 415 aa10.08□□□□□ -0.8
LAMA4-201ENST00000230538 WDR54Q9H977 334 aa10.08□□□□□ -0.8
LAMA4-201ENST00000230538 KLK13Q9UKR3 277 aa10.08□□□□□ -0.8
LAMA4-201ENST00000230538 CDS2O95674 445 aa10.08□□□□□ -0.8
LAMA4-201ENST00000230538 GBGT1Q8N5D6 347 aa10.08□□□□□ -0.8
LAMA4-201ENST00000230538 ZNF721Q8TF20 911 aa10.08□□□□□ -0.8
LAMA4-201ENST00000230538 PGLYRP3Q96LB9 341 aa10.08□□□□□ -0.8
LAMA4-201ENST00000230538 SIRT7Q9NRC8 400 aa10.08□□□□□ -0.8
LAMA4-201ENST00000230538 OPN4Q9UHM6 478 aa10.08□□□□□ -0.8
LAMA4-201ENST00000230538 H3BQ15 152 aa10.08□□□□□ -0.8
LAMA4-201ENST00000230538 J3QR06 171 aa10.08□□□□□ -0.8
LAMA4-201ENST00000230538 DPPA3Q6W0C5 159 aa10.08□□□□□ -0.8
LAMA4-201ENST00000230538 STPG2Q8N412 459 aa10.08□□□□□ -0.8
LAMA4-201ENST00000230538 TTTY12Q9BZ98 90 aa10.08□□□□□ -0.8
LAMA4-201ENST00000230538 LPAR2Q9HBW0 351 aa10.08□□□□□ -0.8
LAMA4-201ENST00000230538 CA11O75493 328 aa10.08□□□□□ -0.8
LAMA4-201ENST00000230538 REG1BP48304 166 aa10.08□□□□□ -0.8
LAMA4-201ENST00000230538 MMDQ15546 238 aa10.08□□□□□ -0.8
LAMA4-201ENST00000230538 C1orf53Q5VUE5 145 aa10.08□□□□□ -0.8
LAMA4-201ENST00000230538 PET117Q6UWS5 81 aa10.08□□□□□ -0.8
LAMA4-201ENST00000230538 PRNTQ86SH4 94 aa10.08□□□□□ -0.8
LAMA4-201ENST00000230538 LRRC75AQ8NAA5 344 aa10.08□□□□□ -0.8
LAMA4-201ENST00000230538 HDHD3Q9BSH5 251 aaPredicted RBP10.08□□□□□ -0.8
LAMA4-201ENST00000230538 HIGD1AQ9Y241 93 aa10.08□□□□□ -0.8
LAMA4-201ENST00000230538 KLHDC2Q9Y2U9 406 aa10.08□□□□□ -0.8
LAMA4-201ENST00000230538 A0A1W2PPE3 182 aa10.08□□□□□ -0.8
LAMA4-201ENST00000230538 ZNF79Q15937 498 aa10.08□□□□□ -0.8
LAMA4-201ENST00000230538 DCAF10Q5QP82 559 aa10.08□□□□□ -0.8
LAMA4-201ENST00000230538 LDLRAD3Q86YD5 345 aa10.08□□□□□ -0.8
LAMA4-201ENST00000230538 ZNF519Q8TB69 540 aa10.08□□□□□ -0.8
LAMA4-201ENST00000230538 DUSP15Q9H1R2 295 aaPredicted RBP10.08□□□□□ -0.8
LAMA4-201ENST00000230538 SNURFLB1AK76 121 aa10.07□□□□□ -0.8
LAMA4-201ENST00000230538 H3BVH4 76 aa10.07□□□□□ -0.8
LAMA4-201ENST00000230538 PITX3O75364 302 aa10.07□□□□□ -0.8
LAMA4-201ENST00000230538 RPL24P83731 157 aaKnown RBP10.07□□□□□ -0.8
LAMA4-201ENST00000230538 COTL1Q14019 142 aa10.07□□□□□ -0.8
LAMA4-201ENST00000230538 KCNMB1Q16558 191 aa10.07□□□□□ -0.8
LAMA4-201ENST00000230538 TMEM251Q8N6I4 163 aa10.07□□□□□ -0.8
LAMA4-201ENST00000230538 MS4A7Q9GZW8 240 aaPredicted RBP10.07□□□□□ -0.8
LAMA4-201ENST00000230538 RAB33BQ9H082 229 aa10.07□□□□□ -0.8
LAMA4-201ENST00000230538 CRISPLD2Q9H0B8 497 aa10.07□□□□□ -0.8
LAMA4-201ENST00000230538 ST6GALNAC2Q9UJ37 374 aa10.07□□□□□ -0.8
LAMA4-201ENST00000230538 DTX4Q9Y2E6 619 aa10.07□□□□□ -0.8
LAMA4-201ENST00000230538 TMSB15BA0A087X1C1 80 aa10.07□□□□□ -0.8
LAMA4-201ENST00000230538 C21orf62-AS1Q17RA5 79 aa10.07□□□□□ -0.8
LAMA4-201ENST00000230538 TMEM91Q6ZNR0 172 aa10.07□□□□□ -0.8
LAMA4-201ENST00000230538 RFLNBQ8N5W9 214 aa10.07□□□□□ -0.8
LAMA4-201ENST00000230538 NUDT16L1Q9BRJ7 211 aaKnown RBP10.07□□□□□ -0.8
LAMA4-201ENST00000230538 PCGF1Q9BSM1 259 aa10.07□□□□□ -0.8
LAMA4-201ENST00000230538 WIPI2Q9Y4P8 454 aa10.07□□□□□ -0.8
LAMA4-201ENST00000230538 CTXND1A0A1B0GTU2 59 aa10.07□□□□□ -0.8
LAMA4-201ENST00000230538 C7orf77A4D0Y5 90 aa10.07□□□□□ -0.8
LAMA4-201ENST00000230538 CCL21O00585 134 aa10.07□□□□□ -0.8
LAMA4-201ENST00000230538 PLA2G10O15496 165 aa10.07□□□□□ -0.8
LAMA4-201ENST00000230538 PPP1CCP36873 323 aaKnown RBP10.07□□□□□ -0.8
LAMA4-201ENST00000230538 GZMMP51124 257 aa10.07□□□□□ -0.8
LAMA4-201ENST00000230538 ZNF137PP52743 207 aa10.07□□□□□ -0.8
LAMA4-201ENST00000230538 GABRA6Q16445 453 aa10.07□□□□□ -0.8
LAMA4-201ENST00000230538 TEX30Q5JUR7 227 aa10.07□□□□□ -0.8
LAMA4-201ENST00000230538 HOGA1Q86XE5 327 aa10.07□□□□□ -0.8
LAMA4-201ENST00000230538 STARD4Q96DR4 205 aa10.07□□□□□ -0.8
LAMA4-201ENST00000230538 OR2J1Q9GZK6 312 aa10.07□□□□□ -0.8
LAMA4-201ENST00000230538 PARP11Q9NR21 331 aa10.07□□□□□ -0.8
LAMA4-201ENST00000230538 PPIAL4EA0A075B759 164 aa10.07□□□□□ -0.8
LAMA4-201ENST00000230538 A0A087X0M5 115 aa10.07□□□□□ -0.8
LAMA4-201ENST00000230538 SPAARA0A1B0GVQ0 90 aa10.07□□□□□ -0.8
LAMA4-201ENST00000230538 A0A1B0GX30 115 aa10.07□□□□□ -0.8
LAMA4-201ENST00000230538 PPIAL4DF5H284 164 aa10.07□□□□□ -0.8
LAMA4-201ENST00000230538 PPIAL4FP0DN26 164 aa10.07□□□□□ -0.8
LAMA4-201ENST00000230538 KIR2DL1P43626 348 aaPredicted RBP10.07□□□□□ -0.8
LAMA4-201ENST00000230538 RBM11P57052 281 aaKnown RBP10.07□□□□□ -0.8
LAMA4-201ENST00000230538 ZNF841Q6ZN19 808 aa10.07□□□□□ -0.8
LAMA4-201ENST00000230538 P2RX4Q99571 388 aa10.07□□□□□ -0.8
LAMA4-201ENST00000230538 GPA33Q99795 319 aa10.07□□□□□ -0.8
LAMA4-201ENST00000230538 PPIAL4AQ9Y536 164 aa10.07□□□□□ -0.8
LAMA4-201ENST00000230538 TRBV5-3A0A0A0MS03 114 aa10.07□□□□□ -0.8
LAMA4-201ENST00000230538 CENPVL1A0A0U1RR11 272 aa10.07□□□□□ -0.8
LAMA4-201ENST00000230538 CCDC144NLQ6NUI1 221 aa10.07□□□□□ -0.8
LAMA4-201ENST00000230538 ZNF552Q9H707 407 aaPredicted RBP10.07□□□□□ -0.8
LAMA4-201ENST00000230538 AUP1Q9Y679 476 aa10.07□□□□□ -0.8
LAMA4-201ENST00000230538 PATE3B3GLJ2 98 aa10.07□□□□□ -0.8
LAMA4-201ENST00000230538 OR10J1P30954 320 aa10.07□□□□□ -0.8
LAMA4-201ENST00000230538 C1orf185Q5T7R7 199 aa10.07□□□□□ -0.8
LAMA4-201ENST00000230538 SPANXN1Q5VSR9 72 aa10.07□□□□□ -0.8
LAMA4-201ENST00000230538 TMEM52Q8NDY8 209 aa10.07□□□□□ -0.8
LAMA4-201ENST00000230538 ZNF385AQ96PM9 386 aaKnown RBP10.07□□□□□ -0.8
LAMA4-201ENST00000230538 STAG3L2P0CL84 134 aa10.06□□□□□ -0.8
LAMA4-201ENST00000230538 PRDX2P32119 198 aa10.06□□□□□ -0.8
LAMA4-201ENST00000230538 SIGLEC14Q08ET2 396 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms