RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 GUCA1AP43080 201 aaPredicted RBP11.85□□□□□ -0.51
SCARB2-227ENST00000640957 NPBWR2P48146 333 aa11.85□□□□□ -0.51
SCARB2-227ENST00000640957 CARD18P57730 90 aa11.85□□□□□ -0.51
SCARB2-227ENST00000640957 IGLV3-21P80748 117 aaPredicted RBP11.85□□□□□ -0.51
SCARB2-227ENST00000640957 PHYHD1Q5SRE7 291 aa11.85□□□□□ -0.51
SCARB2-227ENST00000640957 ZNF100Q8IYN0 542 aa11.85□□□□□ -0.51
SCARB2-227ENST00000640957 ZDHHC23Q8IYP9 409 aa11.85□□□□□ -0.51
SCARB2-227ENST00000640957 OR13D1Q8NGV5 346 aa11.85□□□□□ -0.51
SCARB2-227ENST00000640957 OR6X1Q8NH79 312 aa11.85□□□□□ -0.51
SCARB2-227ENST00000640957 IMMP2LQ96T52 175 aa11.85□□□□□ -0.51
SCARB2-227ENST00000640957 FAM103A1Q9BTL3 118 aaKnown RBP11.85□□□□□ -0.51
SCARB2-227ENST00000640957 TUBG2Q9NRH3 451 aa11.85□□□□□ -0.51
SCARB2-227ENST00000640957 PRSS50Q9UI38 385 aa11.85□□□□□ -0.51
SCARB2-227ENST00000640957 IGKV1-12A0A0C4DH73 117 aa11.85□□□□□ -0.51
SCARB2-227ENST00000640957 PPYP01298 95 aa11.85□□□□□ -0.51
SCARB2-227ENST00000640957 IGKV1D-12P01611 117 aa11.85□□□□□ -0.51
SCARB2-227ENST00000640957 IGHG1P01857 330 aa11.85□□□□□ -0.51
SCARB2-227ENST00000640957 ARL16Q0P5N6 197 aa11.85□□□□□ -0.51
SCARB2-227ENST00000640957 COL13A1Q5TAT6 717 aaPredicted RBP11.85□□□□□ -0.51
SCARB2-227ENST00000640957 ZNF468Q5VIY5 522 aaPredicted RBP11.85□□□□□ -0.51
SCARB2-227ENST00000640957 SLC16A14Q7RTX9 510 aa11.85□□□□□ -0.51
SCARB2-227ENST00000640957 OR4F5Q8NH21 305 aa11.85□□□□□ -0.51
SCARB2-227ENST00000640957 IL1F10Q8WWZ1 152 aa11.85□□□□□ -0.51
SCARB2-227ENST00000640957 HS3ST6Q96QI5 342 aa11.85□□□□□ -0.51
SCARB2-227ENST00000640957 OR5B12Q96R08 314 aa11.85□□□□□ -0.51
SCARB2-227ENST00000640957 OR4F4Q96R69 305 aa11.85□□□□□ -0.51
SCARB2-227ENST00000640957 Q9N2K0 584 aa11.85□□□□□ -0.51
SCARB2-227ENST00000640957 UBE2G2P60604 165 aa11.84□□□□□ -0.51
SCARB2-227ENST00000640957 TGFBR3Q03167 851 aa11.84□□□□□ -0.51
SCARB2-227ENST00000640957 RELQ04864 619 aaPredicted RBP11.84□□□□□ -0.51
SCARB2-227ENST00000640957 FAM78BQ5VT40 261 aa11.84□□□□□ -0.51
SCARB2-227ENST00000640957 ZNF774Q6NX45 483 aa11.84□□□□□ -0.51
SCARB2-227ENST00000640957 PLPPR1Q8TBJ4 325 aa11.84□□□□□ -0.51
SCARB2-227ENST00000640957 HLA-CQ95604 372 aa11.84□□□□□ -0.51
SCARB2-227ENST00000640957 Q96M66 194 aa11.84□□□□□ -0.51
SCARB2-227ENST00000640957 CCNL2Q96S94 520 aaPredicted RBP11.84□□□□□ -0.51
SCARB2-227ENST00000640957 PNRC2Q9NPJ4 139 aaKnown RBP11.84□□□□□ -0.51
SCARB2-227ENST00000640957 MYOTQ9UBF9 498 aa11.84□□□□□ -0.51
SCARB2-227ENST00000640957 LIPT2A6NK58 231 aa11.84□□□□□ -0.51
SCARB2-227ENST00000640957 IFNA5P01569 189 aa11.84□□□□□ -0.51
SCARB2-227ENST00000640957 CCNOP22674 350 aa11.84□□□□□ -0.51
SCARB2-227ENST00000640957 EXT1Q16394 746 aa11.84□□□□□ -0.51
SCARB2-227ENST00000640957 OR51G1Q8NGK1 321 aa11.84□□□□□ -0.51
SCARB2-227ENST00000640957 SCGB1C1Q8TD33 95 aa11.84□□□□□ -0.51
SCARB2-227ENST00000640957 PIGCQ92535 297 aa11.84□□□□□ -0.51
SCARB2-227ENST00000640957 LHX4Q969G2 390 aa11.84□□□□□ -0.51
SCARB2-227ENST00000640957 ADGRG7Q96K78 797 aa11.84□□□□□ -0.51
SCARB2-227ENST00000640957 MS4A10Q96PG2 267 aa11.84□□□□□ -0.51
SCARB2-227ENST00000640957 PARD6AQ9NPB6 346 aa11.84□□□□□ -0.51
SCARB2-227ENST00000640957 LYRM2Q9NU23 88 aaPredicted RBP11.84□□□□□ -0.51
SCARB2-227ENST00000640957 TRBV11-1A0A0K0K1C0 115 aa11.84□□□□□ -0.51
SCARB2-227ENST00000640957 C1QTNF9BB2RNN3 333 aa11.84□□□□□ -0.51
SCARB2-227ENST00000640957 AQP7O14520 342 aa11.84□□□□□ -0.51
SCARB2-227ENST00000640957 DUX1O43812 170 aa11.84□□□□□ -0.51
SCARB2-227ENST00000640957 SPINK4O60575 86 aa11.84□□□□□ -0.51
SCARB2-227ENST00000640957 PITX3O75364 302 aa11.84□□□□□ -0.51
SCARB2-227ENST00000640957 HPRT1P00492 218 aa11.84□□□□□ -0.51
SCARB2-227ENST00000640957 LCATP04180 440 aa11.84□□□□□ -0.51
SCARB2-227ENST00000640957 GCH1P30793 250 aa11.84□□□□□ -0.51
SCARB2-227ENST00000640957 TNFSF10P50591 281 aa11.84□□□□□ -0.51
SCARB2-227ENST00000640957 RNF151Q2KHN1 245 aa11.84□□□□□ -0.51
SCARB2-227ENST00000640957 SPINK9Q5DT21 86 aa11.84□□□□□ -0.51
SCARB2-227ENST00000640957 SPANXN5Q5MJ07 72 aa11.84□□□□□ -0.51
SCARB2-227ENST00000640957 VN1R17PQ8TDU5 208 aa11.84□□□□□ -0.51
SCARB2-227ENST00000640957 TMEM18Q96B42 140 aa11.84□□□□□ -0.51
SCARB2-227ENST00000640957 RCC1LQ96I51 464 aaKnown RBP11.84□□□□□ -0.51
SCARB2-227ENST00000640957 ZNF320A2RRD8 509 aa11.83□□□□□ -0.52
SCARB2-227ENST00000640957 FOXI3A8MTJ6 420 aaPredicted RBP11.83□□□□□ -0.52
SCARB2-227ENST00000640957 ZNF737O75373 536 aa11.83□□□□□ -0.52
SCARB2-227ENST00000640957 ZNF92Q03936 586 aa11.83□□□□□ -0.52
SCARB2-227ENST00000640957 ARL6IP1Q15041 203 aa11.83□□□□□ -0.52
SCARB2-227ENST00000640957 BSXQ3C1V8 233 aa11.83□□□□□ -0.52
SCARB2-227ENST00000640957 SMRP1Q8NCR6 262 aa11.83□□□□□ -0.52
SCARB2-227ENST00000640957 ZNF845Q96IR2 970 aaPredicted RBP11.83□□□□□ -0.52
SCARB2-227ENST00000640957 CDH20Q9HBT6 801 aa11.83□□□□□ -0.52
SCARB2-227ENST00000640957 FBLN5Q9UBX5 448 aa11.83□□□□□ -0.52
SCARB2-227ENST00000640957 ADAMTS9Q9P2N4 1935 aa11.83□□□□□ -0.52
SCARB2-227ENST00000640957 RIF1Q5UIP0 2472 aaKnown RBP11.83□□□□□ -0.52
SCARB2-227ENST00000640957 DNAJC13O75165 2243 aa11.83□□□□□ -0.52
SCARB2-227ENST00000640957 TRDCB7Z8K6 153 aa11.83□□□□□ -0.52
SCARB2-227ENST00000640957 IGHV3-9P01782 118 aa11.83□□□□□ -0.52
SCARB2-227ENST00000640957 OPN1MWP04001 364 aa11.83□□□□□ -0.52
SCARB2-227ENST00000640957 TK1P04183 234 aa11.83□□□□□ -0.52
SCARB2-227ENST00000640957 OPN1MW2P0DN77 364 aa11.83□□□□□ -0.52
SCARB2-227ENST00000640957 OPN1MW3P0DN78 364 aa11.83□□□□□ -0.52
SCARB2-227ENST00000640957 ERVFC1-1P60608 527 aa11.83□□□□□ -0.52
SCARB2-227ENST00000640957 PRR31Q5SQ13 230 aa11.83□□□□□ -0.52
SCARB2-227ENST00000640957 PLXDC1Q8IUK5 500 aa11.83□□□□□ -0.52
SCARB2-227ENST00000640957 RBMXL1Q96E39 390 aaKnown RBP11.83□□□□□ -0.52
SCARB2-227ENST00000640957 ACTR3CQ9C0K3 210 aaPredicted RBP11.83□□□□□ -0.52
SCARB2-227ENST00000640957 CBY1Q9Y3M2 126 aa11.83□□□□□ -0.52
SCARB2-227ENST00000640957 DSPP15924 2871 aaKnown RBP11.83□□□□□ -0.52
SCARB2-227ENST00000640957 IGHV1OR15-9A0A0B4J2B8 117 aa11.82□□□□□ -0.52
SCARB2-227ENST00000640957 M0R135 149 aa11.82□□□□□ -0.52
SCARB2-227ENST00000640957 SIAH2O43255 324 aa11.82□□□□□ -0.52
SCARB2-227ENST00000640957 NOXO1Q8NFA2 376 aa11.82□□□□□ -0.52
SCARB2-227ENST00000640957 TMEM234Q8WY98 164 aa11.82□□□□□ -0.52
SCARB2-227ENST00000640957 ZNF799Q96GE5 643 aa11.82□□□□□ -0.52
SCARB2-227ENST00000640957 ZNF385AQ96PM9 386 aaKnown RBP11.82□□□□□ -0.52
SCARB2-227ENST00000640957 OR6C1Q96RD1 312 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms