RNA–Protein interactions for RNA: ENST00000617445.4

CCDC28A-203, Transcript of coiled-coil domain containing 28A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28A, Length 1,240 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-203ENST00000617445 OR10X1Q8NGY0 326 aa15.2■□□□□ 0.02
CCDC28A-203ENST00000617445 PSORS1C1Q9UIG5 152 aa15.2■□□□□ 0.02
CCDC28A-203ENST00000617445 ANKRD65E5RJM6 399 aa15.19■□□□□ 0.02
CCDC28A-203ENST00000617445 CASQ2O14958 399 aaPredicted RBP15.19■□□□□ 0.02
CCDC28A-203ENST00000617445 SSTR5P35346 364 aa15.19■□□□□ 0.02
CCDC28A-203ENST00000617445 WNT4P56705 351 aa15.19■□□□□ 0.02
CCDC28A-203ENST00000617445 Q3ZCU0 254 aa15.19■□□□□ 0.02
CCDC28A-203ENST00000617445 OGFRL1Q5TC84 451 aaPredicted RBP15.19■□□□□ 0.02
CCDC28A-203ENST00000617445 FBLIM1Q8WUP2 373 aa15.19■□□□□ 0.02
CCDC28A-203ENST00000617445 LEAP2Q969E1 77 aa15.19■□□□□ 0.02
CCDC28A-203ENST00000617445 ORAI1Q96D31 301 aa15.19■□□□□ 0.02
CCDC28A-203ENST00000617445 VCXQ9H320 206 aa15.19■□□□□ 0.02
CCDC28A-203ENST00000617445 MRPS28Q9Y2Q9 187 aaKnown RBP15.19■□□□□ 0.02
CCDC28A-203ENST00000617445 TSSC4Q9Y5U2 329 aaPredicted RBP15.19■□□□□ 0.02
CCDC28A-203ENST00000617445 PRKDCP78527 4128 aaKnown RBP15.19■□□□□ 0.02
CCDC28A-203ENST00000617445 TRAV8-7A0A075B6U6 113 aa15.18■□□□□ 0.02
CCDC28A-203ENST00000617445 A0A1W2PPI3 338 aa15.18■□□□□ 0.02
CCDC28A-203ENST00000617445 TCRBV4S1A1TA0A5B7 111 aa15.18■□□□□ 0.02
CCDC28A-203ENST00000617445 FAM90A10PA6NDY2 464 aa15.18■□□□□ 0.02
CCDC28A-203ENST00000617445 FAM90A7PA6NKC0 464 aa15.18■□□□□ 0.02
CCDC28A-203ENST00000617445 FAM90A23PA8MXZ1 464 aa15.18■□□□□ 0.02
CCDC28A-203ENST00000617445 MCRIP1C9JLW8 97 aa15.18■□□□□ 0.02
CCDC28A-203ENST00000617445 MYL12BO14950 172 aa15.18■□□□□ 0.02
CCDC28A-203ENST00000617445 FGF16O43320 207 aa15.18■□□□□ 0.02
CCDC28A-203ENST00000617445 GAPDHP04406 335 aaKnown RBP15.18■□□□□ 0.02
CCDC28A-203ENST00000617445 SNRNP70P08621 437 aaKnown RBP15.18■□□□□ 0.02
CCDC28A-203ENST00000617445 MAPK3P27361 379 aaPredicted RBP15.18■□□□□ 0.02
CCDC28A-203ENST00000617445 DOC2BQ14184 412 aa15.18■□□□□ 0.02
CCDC28A-203ENST00000617445 LTC4SQ16873 150 aa15.18■□□□□ 0.02
CCDC28A-203ENST00000617445 TMEM30BQ3MIR4 351 aa15.18■□□□□ 0.02
CCDC28A-203ENST00000617445 ZNF497Q6ZNH5 498 aa15.18■□□□□ 0.02
CCDC28A-203ENST00000617445 JAGN1Q8N5M9 183 aa15.18■□□□□ 0.02
CCDC28A-203ENST00000617445 LINC00311Q8N616 119 aa15.18■□□□□ 0.02
CCDC28A-203ENST00000617445 DRAM1Q8N682 238 aa15.18■□□□□ 0.02
CCDC28A-203ENST00000617445 ZFP41Q8N8Y5 198 aa15.18■□□□□ 0.02
CCDC28A-203ENST00000617445 WFDC9Q8NEX5 89 aa15.18■□□□□ 0.02
CCDC28A-203ENST00000617445 OR56B4Q8NH76 319 aa15.18■□□□□ 0.02
CCDC28A-203ENST00000617445 NEK7Q8TDX7 302 aa15.18■□□□□ 0.02
CCDC28A-203ENST00000617445 ARL11Q969Q4 196 aa15.18■□□□□ 0.02
CCDC28A-203ENST00000617445 OR14A2Q96R54 314 aa15.18■□□□□ 0.02
CCDC28A-203ENST00000617445 DCLRE1BQ9H816 532 aa15.18■□□□□ 0.02
CCDC28A-203ENST00000617445 ERGIC3Q9Y282 383 aa15.18■□□□□ 0.02
CCDC28A-203ENST00000617445 C15orf65H3BRN8 121 aa15.17■□□□□ 0.02
CCDC28A-203ENST00000617445 CA11O75493 328 aa15.17■□□□□ 0.02
CCDC28A-203ENST00000617445 IGHV3-7P01780 117 aa15.17■□□□□ 0.02
CCDC28A-203ENST00000617445 MT-ND4P03905 459 aa15.17■□□□□ 0.02
CCDC28A-203ENST00000617445 GLAP06280 429 aa15.17■□□□□ 0.02
CCDC28A-203ENST00000617445 GNAO1P09471 354 aa15.17■□□□□ 0.02
CCDC28A-203ENST00000617445 CELP19835 753 aa15.17■□□□□ 0.02
CCDC28A-203ENST00000617445 GNG10P50151 68 aa15.17■□□□□ 0.02
CCDC28A-203ENST00000617445 ZNF816Q0VGE8 651 aaPredicted RBP15.17■□□□□ 0.02
CCDC28A-203ENST00000617445 HES1Q14469 280 aa15.17■□□□□ 0.02
CCDC28A-203ENST00000617445 GLIPR1L1Q6UWM5 242 aa15.17■□□□□ 0.02
CCDC28A-203ENST00000617445 NKAIN3Q8N8D7 197 aa15.17■□□□□ 0.02
CCDC28A-203ENST00000617445 MUL1Q969V5 352 aa15.17■□□□□ 0.02
CCDC28A-203ENST00000617445 DERL3Q96Q80 235 aa15.17■□□□□ 0.02
CCDC28A-203ENST00000617445 UQCC2Q9BRT2 126 aa15.17■□□□□ 0.02
CCDC28A-203ENST00000617445 ZNF581Q9P0T4 197 aa15.17■□□□□ 0.02
CCDC28A-203ENST00000617445 RCC2Q9P258 522 aaKnown RBP15.17■□□□□ 0.02
CCDC28A-203ENST00000617445 TRAV39A0A0B4J263 110 aa15.16■□□□□ 0.02
CCDC28A-203ENST00000617445 MAGEA13PA6NCF6 341 aa15.16■□□□□ 0.02
CCDC28A-203ENST00000617445 AIPO00170 330 aa15.16■□□□□ 0.02
CCDC28A-203ENST00000617445 CCRL2O00421 344 aa15.16■□□□□ 0.02
CCDC28A-203ENST00000617445 SDCBPO00560 298 aaPredicted RBP15.16■□□□□ 0.02
CCDC28A-203ENST00000617445 PF4V1P10720 104 aa15.16■□□□□ 0.02
CCDC28A-203ENST00000617445 TMEM11P17152 192 aa15.16■□□□□ 0.02
CCDC28A-203ENST00000617445 FBLN7Q53RD9 439 aa15.16■□□□□ 0.02
CCDC28A-203ENST00000617445 C9orf152Q5JTZ5 239 aa15.16■□□□□ 0.02
CCDC28A-203ENST00000617445 RNLSQ5VYX0 342 aa15.16■□□□□ 0.02
CCDC28A-203ENST00000617445 AWAT2Q6E213 333 aa15.16■□□□□ 0.02
CCDC28A-203ENST00000617445 LAIR2Q6ISS4 152 aa15.16■□□□□ 0.02
CCDC28A-203ENST00000617445 TRAT1Q6PIZ9 186 aa15.16■□□□□ 0.02
CCDC28A-203ENST00000617445 AHSA2Q719I0 299 aa15.16■□□□□ 0.02
CCDC28A-203ENST00000617445 NANOGP1Q8N7R0 232 aa15.16■□□□□ 0.02
CCDC28A-203ENST00000617445 BPIFB6Q8NFQ5 453 aa15.16■□□□□ 0.02
CCDC28A-203ENST00000617445 GFOD1Q9NXC2 390 aa15.16■□□□□ 0.02
CCDC28A-203ENST00000617445 GHRLQ9UBU3 117 aa15.16■□□□□ 0.02
CCDC28A-203ENST00000617445 A0A1W2PP11 408 aa15.15■□□□□ 0.02
CCDC28A-203ENST00000617445 HSD17B6O14756 317 aa15.15■□□□□ 0.02
CCDC28A-203ENST00000617445 SPINT2O43291 252 aa15.15■□□□□ 0.02
CCDC28A-203ENST00000617445 MAS1P04201 325 aa15.15■□□□□ 0.02
CCDC28A-203ENST00000617445 IL3RAP26951 378 aa15.15■□□□□ 0.02
CCDC28A-203ENST00000617445 LOXL3P58215 753 aa15.15■□□□□ 0.02
CCDC28A-203ENST00000617445 EBI3Q14213 229 aa15.15■□□□□ 0.02
CCDC28A-203ENST00000617445 TCTEX1D4Q5JR98 221 aa15.15■□□□□ 0.02
CCDC28A-203ENST00000617445 C6orf183Q5T699 404 aa15.15■□□□□ 0.02
CCDC28A-203ENST00000617445 GAPTQ8N292 157 aa15.15■□□□□ 0.02
CCDC28A-203ENST00000617445 MS4A15Q8N5U1 240 aa15.15■□□□□ 0.02
CCDC28A-203ENST00000617445 CCDC107Q8WV48 283 aa15.15■□□□□ 0.02
CCDC28A-203ENST00000617445 MYDGFQ969H8 173 aa15.15■□□□□ 0.02
CCDC28A-203ENST00000617445 FKBP14Q9NWM8 211 aa15.15■□□□□ 0.02
CCDC28A-203ENST00000617445 TRAPPC2LQ9UL33 140 aa15.15■□□□□ 0.02
CCDC28A-203ENST00000617445 IGHV1-3A0A0C4DH29 117 aa15.14■□□□□ 0.01
CCDC28A-203ENST00000617445 PNMA8CA0A1B0GUJ8 204 aa15.14■□□□□ 0.01
CCDC28A-203ENST00000617445 A0A1W2PPK0 400 aa15.14■□□□□ 0.01
CCDC28A-203ENST00000617445 A0A1W2PRX2 142 aa15.14■□□□□ 0.01
CCDC28A-203ENST00000617445 CD33P20138 364 aa15.14■□□□□ 0.01
CCDC28A-203ENST00000617445 FUT3P21217 361 aa15.14■□□□□ 0.01
CCDC28A-203ENST00000617445 DIAPH2-AS1Q14236 149 aa15.14■□□□□ 0.01
CCDC28A-203ENST00000617445 OXLD1Q5BKU9 147 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms