RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 WBP1LQ9NX94 342 aa9.14□□□□□ -0.95
USB1-212ENST00000566082 HOXA5P20719 270 aa9.13□□□□□ -0.95
USB1-212ENST00000566082 CEACAM6P40199 344 aa9.13□□□□□ -0.95
USB1-212ENST00000566082 MDH2P40926 338 aaKnown RBP9.13□□□□□ -0.95
USB1-212ENST00000566082 MST1LQ2TV78 715 aa9.13□□□□□ -0.95
USB1-212ENST00000566082 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.13□□□□□ -0.95
USB1-212ENST00000566082 SLC35E3Q7Z769 313 aa9.13□□□□□ -0.95
USB1-212ENST00000566082 MRGPRGQ86SM5 289 aa9.13□□□□□ -0.95
USB1-212ENST00000566082 OR10V1Q8NGI7 309 aa9.13□□□□□ -0.95
USB1-212ENST00000566082 M1APQ8TC57 530 aa9.13□□□□□ -0.95
USB1-212ENST00000566082 C10orf35Q96D05 121 aa9.13□□□□□ -0.95
USB1-212ENST00000566082 HIPK2Q9H2X6 1198 aa9.13□□□□□ -0.95
USB1-212ENST00000566082 Q9N2K0 584 aa9.13□□□□□ -0.95
USB1-212ENST00000566082 ZDHHC8Q9ULC8 765 aa9.13□□□□□ -0.95
USB1-212ENST00000566082 CYB5R3P00387 301 aaPredicted RBP9.13□□□□□ -0.95
USB1-212ENST00000566082 RBM11P57052 281 aaKnown RBP9.13□□□□□ -0.95
USB1-212ENST00000566082 NXPH1P58417 271 aa9.13□□□□□ -0.95
USB1-212ENST00000566082 HIST1H3AP68431 136 aa9.13□□□□□ -0.95
USB1-212ENST00000566082 C16orf82Q7Z2V1 217 aa9.13□□□□□ -0.95
USB1-212ENST00000566082 OR10D3Q8NH80 312 aa9.13□□□□□ -0.95
USB1-212ENST00000566082 MRPL30Q8TCC3 161 aaKnown RBP9.13□□□□□ -0.95
USB1-212ENST00000566082 ZNF488Q96MN9 340 aa9.13□□□□□ -0.95
USB1-212ENST00000566082 FANCMQ8IYD8 2048 aa9.13□□□□□ -0.95
USB1-212ENST00000566082 ARGFXA6NJG6 315 aa9.13□□□□□ -0.95
USB1-212ENST00000566082 ATXN7O15265 892 aaPredicted RBP9.13□□□□□ -0.95
USB1-212ENST00000566082 CELA2AP08217 269 aa9.13□□□□□ -0.95
USB1-212ENST00000566082 ZNF25P17030 456 aaPredicted RBP9.13□□□□□ -0.95
USB1-212ENST00000566082 CA6P23280 308 aa9.13□□□□□ -0.95
USB1-212ENST00000566082 C21orf62-AS1Q17RA5 79 aa9.13□□□□□ -0.95
USB1-212ENST00000566082 HLA-BQ31612 363 aa9.13□□□□□ -0.95
USB1-212ENST00000566082 ZNF468Q5VIY5 522 aaPredicted RBP9.13□□□□□ -0.95
USB1-212ENST00000566082 H1FOOQ8IZA3 346 aaPredicted RBP9.13□□□□□ -0.95
USB1-212ENST00000566082 FAM58AQ8N1B3 248 aa9.13□□□□□ -0.95
USB1-212ENST00000566082 RFESDQ8TAC1 157 aa9.13□□□□□ -0.95
USB1-212ENST00000566082 HLA-CQ95604 372 aa9.13□□□□□ -0.95
USB1-212ENST00000566082 ZNF501Q96CX3 271 aaPredicted RBP9.13□□□□□ -0.95
USB1-212ENST00000566082 TUBA4BQ9H853 241 aa9.13□□□□□ -0.95
USB1-212ENST00000566082 ZNF391Q9UJN7 358 aa9.13□□□□□ -0.95
USB1-212ENST00000566082 RFNGQ9Y644 331 aa9.13□□□□□ -0.95
USB1-212ENST00000566082 M0R143 59 aa9.12□□□□□ -0.95
USB1-212ENST00000566082 MPZP25189 248 aa9.12□□□□□ -0.95
USB1-212ENST00000566082 SUCLG1P53597 346 aaKnown RBP9.12□□□□□ -0.95
USB1-212ENST00000566082 SRSF4Q08170 494 aaKnown RBP9.12□□□□□ -0.95
USB1-212ENST00000566082 DMWDQ09019 674 aa9.12□□□□□ -0.95
USB1-212ENST00000566082 SPNS3Q6ZMD2 512 aa9.12□□□□□ -0.95
USB1-212ENST00000566082 ZNF439Q8NDP4 499 aa9.12□□□□□ -0.95
USB1-212ENST00000566082 APOBEC3DQ96AK3 386 aaPredicted RBP9.12□□□□□ -0.95
USB1-212ENST00000566082 ZNF524Q96C55 264 aa9.12□□□□□ -0.95
USB1-212ENST00000566082 RTL8AQ9BWD3 113 aa9.12□□□□□ -0.95
USB1-212ENST00000566082 LYRM2Q9NU23 88 aaPredicted RBP9.12□□□□□ -0.95
USB1-212ENST00000566082 A0A0J9YW62 118 aa9.12□□□□□ -0.95
USB1-212ENST00000566082 DBX1A6NMT0 343 aa9.12□□□□□ -0.95
USB1-212ENST00000566082 PAGE4O60829 102 aa9.12□□□□□ -0.95
USB1-212ENST00000566082 CRYAAP02489 173 aa9.12□□□□□ -0.95
USB1-212ENST00000566082 SRP19P09132 144 aaKnown RBP9.12□□□□□ -0.95
USB1-212ENST00000566082 GCH1P30793 250 aa9.12□□□□□ -0.95
USB1-212ENST00000566082 GLIPR1P48060 266 aa9.12□□□□□ -0.95
USB1-212ENST00000566082 HIKESHIQ53FT3 197 aa9.12□□□□□ -0.95
USB1-212ENST00000566082 SIGLECL1Q8N7X8 197 aa9.12□□□□□ -0.95
USB1-212ENST00000566082 BORCS7Q96B45 105 aa9.12□□□□□ -0.95
USB1-212ENST00000566082 NEIL1Q96FI4 390 aaPredicted RBP9.12□□□□□ -0.95
USB1-212ENST00000566082 TECTBQ96PL2 329 aa9.12□□□□□ -0.95
USB1-212ENST00000566082 PCGF1Q9BSM1 259 aa9.12□□□□□ -0.95
USB1-212ENST00000566082 WFDC1Q9HC57 220 aa9.12□□□□□ -0.95
USB1-212ENST00000566082 FKBP11Q9NYL4 201 aa9.12□□□□□ -0.95
USB1-212ENST00000566082 DENND4CQ5VZ89 1909 aa9.12□□□□□ -0.95
USB1-212ENST00000566082 SH2D1BO14796 132 aa9.12□□□□□ -0.95
USB1-212ENST00000566082 WISP1O95388 367 aa9.12□□□□□ -0.95
USB1-212ENST00000566082 ZNF17P17021 662 aa9.12□□□□□ -0.95
USB1-212ENST00000566082 AGAP20933 346 aa9.12□□□□□ -0.95
USB1-212ENST00000566082 NPBWR2P48146 333 aa9.12□□□□□ -0.95
USB1-212ENST00000566082 GNG3P63215 75 aa9.12□□□□□ -0.95
USB1-212ENST00000566082 CXorf67Q86X51 503 aaPredicted RBP9.12□□□□□ -0.95
USB1-212ENST00000566082 TAAR9Q96RI9 348 aa9.12□□□□□ -0.95
USB1-212ENST00000566082 STRADBQ9C0K7 418 aa9.12□□□□□ -0.95
USB1-212ENST00000566082 RPRMQ9NS64 109 aa9.12□□□□□ -0.95
USB1-212ENST00000566082 IL17BQ9UHF5 180 aa9.12□□□□□ -0.95
USB1-212ENST00000566082 POLDIP2Q9Y2S7 368 aa9.12□□□□□ -0.95
USB1-212ENST00000566082 RAC3P60763 192 aa9.11□□□□□ -0.95
USB1-212ENST00000566082 FAM27BQ5VT28 67 aa9.11□□□□□ -0.95
USB1-212ENST00000566082 GFI1BQ5VTD9 330 aa9.11□□□□□ -0.95
USB1-212ENST00000566082 PPP1R35Q8TAP8 253 aa9.11□□□□□ -0.95
USB1-212ENST00000566082 ABHD3Q8WU67 409 aa9.11□□□□□ -0.95
USB1-212ENST00000566082 WBP1Q96G27 269 aa9.11□□□□□ -0.95
USB1-212ENST00000566082 CTDSP1Q9GZU7 261 aa9.11□□□□□ -0.95
USB1-212ENST00000566082 MTCH1Q9NZJ7 389 aa9.11□□□□□ -0.95
USB1-212ENST00000566082 TUBD1Q9UJT1 453 aa9.11□□□□□ -0.95
USB1-212ENST00000566082 ICE1Q9Y2F5 2266 aa9.11□□□□□ -0.95
USB1-212ENST00000566082 ZDBF2Q9HCK1 2354 aa9.11□□□□□ -0.95
USB1-212ENST00000566082 IGKV3D-11A0A0A0MRZ8 115 aa9.11□□□□□ -0.95
USB1-212ENST00000566082 TRAV34A0A0B4J273 112 aa9.11□□□□□ -0.95
USB1-212ENST00000566082 DUXBA0A1W2PPF3 345 aa9.11□□□□□ -0.95
USB1-212ENST00000566082 RPL36A-HNRNPH2H7BZ11 118 aa9.11□□□□□ -0.95
USB1-212ENST00000566082 F2RP25116 425 aa9.11□□□□□ -0.95
USB1-212ENST00000566082 DNM1P46Q6ZS02 220 aa9.11□□□□□ -0.95
USB1-212ENST00000566082 VAMP8Q9BV40 100 aa9.11□□□□□ -0.95
USB1-212ENST00000566082 ANGPTL4Q9BY76 406 aa9.11□□□□□ -0.95
USB1-212ENST00000566082 ZNF586Q9NXT0 402 aa9.11□□□□□ -0.95
USB1-212ENST00000566082 RPH3ALQ9UNE2 315 aa9.11□□□□□ -0.95
USB1-212ENST00000566082 TIMM8AO60220 97 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms