RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 ZBTB25P24278 435 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 HTR2CP28335 458 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 CRABP1P29762 137 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 CDX1P47902 265 aaPredicted RBP3.47□□□□□ -1.85
LINC00561-201ENST00000565815 EMDP50402 254 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 RAB13P51153 203 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 PRKXP51817 358 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 RIDAP52758 137 aaKnown RBP3.47□□□□□ -1.85
LINC00561-201ENST00000565815 RAP1BP61224 184 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 RAP1AP62834 184 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 FUT7Q11130 342 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 SLC17A1Q14916 467 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 ZNF876PQ49A33 203 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 LY6G6FQ5SQ64 297 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 TMEM244Q5VVB8 128 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 RTL6Q6ICC9 239 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 HAGHLQ6PII5 290 aaPredicted RBP3.47□□□□□ -1.85
LINC00561-201ENST00000565815 OR2W3Q7Z3T1 314 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 ZNF584Q8IVC4 421 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 SERPINA12Q8IW75 414 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 CSNK1A1LQ8N752 337 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 BPIFCQ8NFQ6 507 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 TSEN15Q8WW01 171 aaKnown RBP3.47□□□□□ -1.85
LINC00561-201ENST00000565815 TMEM106AQ96A25 262 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 SEH1LQ96EE3 360 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 TSNAXQ99598 290 aaKnown RBP3.47□□□□□ -1.85
LINC00561-201ENST00000565815 AKIRIN1Q9H9L7 192 aaPredicted RBP3.47□□□□□ -1.85
LINC00561-201ENST00000565815 UBQLN4Q9NRR5 601 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 ZNF629Q9UEG4 869 aaPredicted RBP3.47□□□□□ -1.85
LINC00561-201ENST00000565815 ANAPC10Q9UM13 185 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 WIF1Q9Y5W5 379 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 POLEQ07864 2286 aa3.46□□□□□ -1.85
LINC00561-201ENST00000565815 IGLV3-12A0A075B6K2 115 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 TRAV36DV7A0A075B6V5 113 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 TMEM72A0PK05 275 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 MSGN1A6NI15 193 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 OR2AT4A6NND4 320 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 H0YGG7 62 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 CRLF1O75462 422 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 APOHP02749 345 aaPredicted RBP3.46□□□□□ -1.86
LINC00561-201ENST00000565815 ZNF735P0CB33 412 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 SMIM6P0DI80 62 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 OR8G3PP0DMU2 310 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 PVALBP20472 110 aaPredicted RBP3.46□□□□□ -1.86
LINC00561-201ENST00000565815 HSD11B1P28845 292 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 PMELP40967 661 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 HSD17B7P56937 341 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 ERVK-25P63136 954 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 BTG2P78543 158 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 DEFA5Q01523 94 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 DHRS2Q13268 280 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 PPA1Q15181 289 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 C2orf76Q3KRA6 126 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 RNF212Q495C1 297 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 RNASE10Q5GAN6 216 aaKnown RBP3.46□□□□□ -1.86
LINC00561-201ENST00000565815 H3F3CQ6NXT2 135 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 KDM8Q8N371 416 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 GTPBP8Q8N3Z3 284 aaPredicted RBP3.46□□□□□ -1.86
LINC00561-201ENST00000565815 ARRDC1Q8N5I2 433 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 CCDC54Q8NEL0 328 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 TMEM185AQ8NFB2 350 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 METTL21AQ8WXB1 218 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 AQP3Q92482 292 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 TAAR6Q96RI8 345 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 LITAFQ99732 161 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 ZNF471Q9BX82 626 aaPredicted RBP3.46□□□□□ -1.86
LINC00561-201ENST00000565815 ATG5Q9H1Y0 275 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 TMEM185BQ9H7F4 350 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 MOB1AQ9H8S9 216 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 RNF122Q9H9V4 155 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 RAB18Q9NP72 206 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 IKZF2Q9UKS7 526 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 HHLA2Q9UM44 414 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 NOP16Q9Y3C1 178 aaKnown RBP3.46□□□□□ -1.86
LINC00561-201ENST00000565815 MMACHCQ9Y4U1 282 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 KALRNO60229 2985 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 IGKV1D-42A0A075B6H8 117 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 OR52A4PA6NMU1 304 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 A8MUA0 341 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 F8W036 122 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 SULT2B1O00204 365 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 CA11O75493 328 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 CD3DP04234 171 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 PSMB6P28072 239 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 LUMP51884 338 aaPredicted RBP3.46□□□□□ -1.86
LINC00561-201ENST00000565815 RAB5BP61020 215 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 TFF3Q07654 80 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 PJVKQ0ZLH3 352 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 FAM53BQ14153 422 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 SURF2Q15527 256 aaPredicted RBP3.46□□□□□ -1.86
LINC00561-201ENST00000565815 SGCBQ16585 318 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 FBXL19-AS1Q494R0 122 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 CDNFQ49AH0 187 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 VAX1Q5SQQ9 334 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 AVPI1Q5T686 147 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 RIPPLY2Q5TAB7 128 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 TMEM225Q6GV28 225 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 CATSPERDQ86XM0 798 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 DOLPP1Q86YN1 238 aa3.46□□□□□ -1.86
LINC00561-201ENST00000565815 BAP18Q8IXM2 172 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms