RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 FAM90A22PA8MWA6 464 aa16.47■□□□□ 0.23
VTI1B-205ENST00000555543 LY6LH3BQJ8 138 aa16.47■□□□□ 0.23
VTI1B-205ENST00000555543 C15orf65H3BRN8 121 aa16.47■□□□□ 0.23
VTI1B-205ENST00000555543 TOR1AO14656 332 aa16.47■□□□□ 0.23
VTI1B-205ENST00000555543 MT-ND4P03905 459 aa16.47■□□□□ 0.23
VTI1B-205ENST00000555543 CD24P25063 80 aa16.47■□□□□ 0.23
VTI1B-205ENST00000555543 KIR2DS4P43632 304 aa16.47■□□□□ 0.23
VTI1B-205ENST00000555543 EFNB2P52799 333 aa16.47■□□□□ 0.23
VTI1B-205ENST00000555543 TPTE2P1Q5T6R2 138 aa16.47■□□□□ 0.23
VTI1B-205ENST00000555543 OR10K2Q6IF99 312 aa16.47■□□□□ 0.23
VTI1B-205ENST00000555543 CCDC107Q8WV48 283 aa16.47■□□□□ 0.23
VTI1B-205ENST00000555543 GFI1Q99684 422 aa16.47■□□□□ 0.23
VTI1B-205ENST00000555543 NPFFR1Q9GZQ6 430 aa16.47■□□□□ 0.23
VTI1B-205ENST00000555543 MMP28Q9H239 520 aa16.47■□□□□ 0.23
VTI1B-205ENST00000555543 ZNF702PQ9H963 129 aa16.47■□□□□ 0.23
VTI1B-205ENST00000555543 BLOC1S6Q9UL45 172 aa16.47■□□□□ 0.23
VTI1B-205ENST00000555543 PSG11Q9UQ72 335 aa16.47■□□□□ 0.23
VTI1B-205ENST00000555543 LRRC42Q9Y546 428 aa16.47■□□□□ 0.23
VTI1B-205ENST00000555543 MEGF8Q7Z7M0 2845 aa16.47■□□□□ 0.23
VTI1B-205ENST00000555543 FAM90A10PA6NDY2 464 aa16.46■□□□□ 0.23
VTI1B-205ENST00000555543 FAM90A18PA6NE21 464 aa16.46■□□□□ 0.23
VTI1B-205ENST00000555543 FAM90A16PA6NEW6 464 aa16.46■□□□□ 0.23
VTI1B-205ENST00000555543 FAM90A20PA6NIJ5 464 aa16.46■□□□□ 0.23
VTI1B-205ENST00000555543 FAM90A7PA6NKC0 464 aa16.46■□□□□ 0.23
VTI1B-205ENST00000555543 FAM90A12PA8MX19 464 aa16.46■□□□□ 0.23
VTI1B-205ENST00000555543 FAM90A5PA8MXJ8 464 aa16.46■□□□□ 0.23
VTI1B-205ENST00000555543 FAM90A23PA8MXZ1 464 aa16.46■□□□□ 0.23
VTI1B-205ENST00000555543 LEUTXA8MZ59 168 aa16.46■□□□□ 0.23
VTI1B-205ENST00000555543 MCRIP1C9JLW8 97 aa16.46■□□□□ 0.23
VTI1B-205ENST00000555543 AIPO00170 330 aa16.46■□□□□ 0.23
VTI1B-205ENST00000555543 FAM90A15PP0C7V4 464 aa16.46■□□□□ 0.23
VTI1B-205ENST00000555543 FAM90A13PP0C7W8 464 aa16.46■□□□□ 0.23
VTI1B-205ENST00000555543 FAM90A14PP0C7W9 464 aa16.46■□□□□ 0.23
VTI1B-205ENST00000555543 FAM90A24PP0C7X0 464 aa16.46■□□□□ 0.23
VTI1B-205ENST00000555543 VSIG8P0DPA2 414 aa16.46■□□□□ 0.23
VTI1B-205ENST00000555543 CD37P11049 281 aa16.46■□□□□ 0.23
VTI1B-205ENST00000555543 PRRX1P54821 245 aa16.46■□□□□ 0.23
VTI1B-205ENST00000555543 HABP2Q14520 560 aaPredicted RBP16.46■□□□□ 0.23
VTI1B-205ENST00000555543 GLT8D1Q68CQ7 371 aa16.46■□□□□ 0.23
VTI1B-205ENST00000555543 FAM53AQ6NSI3 398 aaPredicted RBP16.46■□□□□ 0.23
VTI1B-205ENST00000555543 ETAA1Q9NY74 926 aa16.46■□□□□ 0.23
VTI1B-205ENST00000555543 GHRLQ9UBU3 117 aa16.46■□□□□ 0.23
VTI1B-205ENST00000555543 PITPNC1Q9UKF7 332 aa16.46■□□□□ 0.23
VTI1B-205ENST00000555543 PEX16Q9Y5Y5 336 aa16.46■□□□□ 0.23
VTI1B-205ENST00000555543 J3QR06 171 aa16.45■□□□□ 0.22
VTI1B-205ENST00000555543 MPIG6BO95866 241 aa16.45■□□□□ 0.22
VTI1B-205ENST00000555543 GNG10P50151 68 aa16.45■□□□□ 0.22
VTI1B-205ENST00000555543 FABP5Q01469 135 aa16.45■□□□□ 0.22
VTI1B-205ENST00000555543 GAPTQ8N292 157 aa16.45■□□□□ 0.22
VTI1B-205ENST00000555543 OR10A7Q8NGE5 316 aa16.45■□□□□ 0.22
VTI1B-205ENST00000555543 ARL11Q969Q4 196 aa16.45■□□□□ 0.22
VTI1B-205ENST00000555543 CST11Q9H112 138 aa16.45■□□□□ 0.22
VTI1B-205ENST00000555543 ACOT13Q9NPJ3 140 aa16.45■□□□□ 0.22
VTI1B-205ENST00000555543 A0A1W2PPE3 182 aa16.44■□□□□ 0.22
VTI1B-205ENST00000555543 SLC22A1O15245 554 aa16.44■□□□□ 0.22
VTI1B-205ENST00000555543 UBBP0CG47 229 aa16.44■□□□□ 0.22
VTI1B-205ENST00000555543 GZMHP20718 246 aa16.44■□□□□ 0.22
VTI1B-205ENST00000555543 FUT3P21217 361 aa16.44■□□□□ 0.22
VTI1B-205ENST00000555543 HTR2CP28335 458 aa16.44■□□□□ 0.22
VTI1B-205ENST00000555543 CEACAM3P40198 252 aa16.44■□□□□ 0.22
VTI1B-205ENST00000555543 UNC119Q13432 240 aa16.44■□□□□ 0.22
VTI1B-205ENST00000555543 TRAM1Q15629 374 aa16.44■□□□□ 0.22
VTI1B-205ENST00000555543 SSX1Q16384 188 aa16.44■□□□□ 0.22
VTI1B-205ENST00000555543 ZNF367Q7RTV3 350 aa16.44■□□□□ 0.22
VTI1B-205ENST00000555543 OR4K15Q8NH41 348 aa16.44■□□□□ 0.22
VTI1B-205ENST00000555543 OR2T6Q8NHC8 308 aa16.44■□□□□ 0.22
VTI1B-205ENST00000555543 UBE2QL1A1L167 161 aa16.43■□□□□ 0.22
VTI1B-205ENST00000555543 C12orf77C9JDV5 145 aa16.43■□□□□ 0.22
VTI1B-205ENST00000555543 ORC5O43913 435 aa16.43■□□□□ 0.22
VTI1B-205ENST00000555543 PDCD6O75340 191 aa16.43■□□□□ 0.22
VTI1B-205ENST00000555543 PSMA1P25786 263 aaKnown RBP16.43■□□□□ 0.22
VTI1B-205ENST00000555543 GABARAPL2P60520 117 aa16.43■□□□□ 0.22
VTI1B-205ENST00000555543 QRFPP83859 136 aa16.43■□□□□ 0.22
VTI1B-205ENST00000555543 EMX1Q04741 257 aaPredicted RBP16.43■□□□□ 0.22
VTI1B-205ENST00000555543 DIAPH2-AS1Q14236 149 aa16.43■□□□□ 0.22
VTI1B-205ENST00000555543 SYT6Q5T7P8 510 aaPredicted RBP16.43■□□□□ 0.22
VTI1B-205ENST00000555543 HIST2H2BDQ6DRA6 164 aa16.43■□□□□ 0.22
VTI1B-205ENST00000555543 Q6ZS46 218 aa16.43■□□□□ 0.22
VTI1B-205ENST00000555543 Q8N2B8 174 aa16.43■□□□□ 0.22
VTI1B-205ENST00000555543 KLHDC1Q8N7A1 406 aa16.43■□□□□ 0.22
VTI1B-205ENST00000555543 OR6M1Q8NGM8 313 aa16.43■□□□□ 0.22
VTI1B-205ENST00000555543 CREB3L1Q96BA8 519 aa16.43■□□□□ 0.22
VTI1B-205ENST00000555543 WNK1Q9H4A3 2382 aa16.42■□□□□ 0.22
VTI1B-205ENST00000555543 IGHV3-43A0A0B4J1X8 118 aa16.42■□□□□ 0.22
VTI1B-205ENST00000555543 TMEM14DPA8MWL7 114 aa16.42■□□□□ 0.22
VTI1B-205ENST00000555543 ARL6IP5O75915 188 aa16.42■□□□□ 0.22
VTI1B-205ENST00000555543 IGHV3-43DP0DP04 118 aa16.42■□□□□ 0.22
VTI1B-205ENST00000555543 CALRP27797 417 aaKnown RBP16.42■□□□□ 0.22
VTI1B-205ENST00000555543 LOXL3P58215 753 aa16.42■□□□□ 0.22
VTI1B-205ENST00000555543 BLCAPP62952 87 aa16.42■□□□□ 0.22
VTI1B-205ENST00000555543 RPS27AP62979 156 aaKnown RBP16.42■□□□□ 0.22
VTI1B-205ENST00000555543 TREML4Q6UXN2 200 aa16.42■□□□□ 0.22
VTI1B-205ENST00000555543 TOMM40LQ969M1 308 aa16.42■□□□□ 0.22
VTI1B-205ENST00000555543 NICN1Q9BSH3 213 aa16.42■□□□□ 0.22
VTI1B-205ENST00000555543 TMEM59Q9BXS4 323 aa16.42■□□□□ 0.22
VTI1B-205ENST00000555543 SERTAD4Q9NUC0 356 aa16.42■□□□□ 0.22
VTI1B-205ENST00000555543 TRAPPC2LQ9UL33 140 aa16.42■□□□□ 0.22
VTI1B-205ENST00000555543 AK6Q9Y3D8 172 aaKnown RBP16.42■□□□□ 0.22
VTI1B-205ENST00000555543 AMMECR1Q9Y4X0 333 aaPredicted RBP16.42■□□□□ 0.22
VTI1B-205ENST00000555543 A0A1W2PPI3 338 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms