RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

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Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 S100GP29377 79 aa15.04■□□□□ -0
SYNE3-202ENST00000553340 RND2P52198 227 aa15.04■□□□□ -0
SYNE3-202ENST00000553340 FGF12P61328 243 aa15.04■□□□□ -0
SYNE3-202ENST00000553340 ZNF468Q5VIY5 522 aaPredicted RBP15.04■□□□□ -0
SYNE3-202ENST00000553340 M1APQ8TC57 530 aa15.04■□□□□ -0
SYNE3-202ENST00000553340 OCIAD1Q9NX40 245 aa15.04■□□□□ -0
SYNE3-202ENST00000553340 H3BP45 60 aa15.03■□□□□ -0
SYNE3-202ENST00000553340 PGLYRP1O75594 196 aaPredicted RBP15.03■□□□□ -0
SYNE3-202ENST00000553340 CYB5R3P00387 301 aaPredicted RBP15.03■□□□□ -0
SYNE3-202ENST00000553340 BCL2P10415 239 aa15.03■□□□□ -0
SYNE3-202ENST00000553340 MPV17LQ2QL34 196 aa15.03■□□□□ -0
SYNE3-202ENST00000553340 RIPPLY2Q5TAB7 128 aa15.03■□□□□ -0
SYNE3-202ENST00000553340 SCGB1C1Q8TD33 95 aa15.03■□□□□ -0
SYNE3-202ENST00000553340 C1QTNF5Q9BXJ0 243 aa15.03■□□□□ -0
SYNE3-202ENST00000553340 ATP23Q9Y6H3 246 aa15.03■□□□□ -0
SYNE3-202ENST00000553340 PIGBOS1A0A0B4J2F0 54 aa15.03■□□□□ -0
SYNE3-202ENST00000553340 A0A1B0GU03 582 aa15.03■□□□□ -0
SYNE3-202ENST00000553340 COX6A1P12074 109 aa15.03■□□□□ -0
SYNE3-202ENST00000553340 FABP4P15090 132 aa15.03■□□□□ -0
SYNE3-202ENST00000553340 SDK2Q58EX2 2172 aa15.03■□□□□ -0
SYNE3-202ENST00000553340 ZNF787Q6DD87 383 aa15.03■□□□□ -0
SYNE3-202ENST00000553340 YRDCQ86U90 279 aaKnown RBP15.03■□□□□ -0
SYNE3-202ENST00000553340 RPS19BP1Q86WX3 136 aaKnown RBP15.03■□□□□ -0
SYNE3-202ENST00000553340 OR2V1Q8NHB1 315 aa15.03■□□□□ -0
SYNE3-202ENST00000553340 KCNE4Q8WWG9 221 aa15.03■□□□□ -0
SYNE3-202ENST00000553340 RAB40CQ96S21 281 aa15.03■□□□□ -0
SYNE3-202ENST00000553340 DUSP23Q9BVJ7 150 aa15.03■□□□□ -0
SYNE3-202ENST00000553340 PRDM14Q9GZV8 571 aa15.03■□□□□ -0
SYNE3-202ENST00000553340 RPRMQ9NS64 109 aa15.03■□□□□ -0
SYNE3-202ENST00000553340 HSPB6O14558 160 aa15.02■□□□□ -0
SYNE3-202ENST00000553340 F2RP25116 425 aa15.02■□□□□ -0
SYNE3-202ENST00000553340 B3GALT5-AS1P59052 145 aa15.02■□□□□ -0
SYNE3-202ENST00000553340 GPR35Q9HC97 309 aa15.02■□□□□ -0
SYNE3-202ENST00000553340 IGKV1-6A0A0C4DH72 117 aa15.02□□□□□ -0.01
SYNE3-202ENST00000553340 CXCL13O43927 109 aa15.02□□□□□ -0.01
SYNE3-202ENST00000553340 CNOT4O95628 575 aaKnown RBP15.02□□□□□ -0.01
SYNE3-202ENST00000553340 HLA-HP01893 362 aa15.02□□□□□ -0.01
SYNE3-202ENST00000553340 TMEM267Q0VDI3 215 aaPredicted RBP15.02□□□□□ -0.01
SYNE3-202ENST00000553340 RNPS1Q15287 305 aaKnown RBP15.02□□□□□ -0.01
SYNE3-202ENST00000553340 SAXO1Q8IYX7 474 aa15.02□□□□□ -0.01
SYNE3-202ENST00000553340 GPR146Q96CH1 333 aa15.02□□□□□ -0.01
SYNE3-202ENST00000553340 ZNF665Q9H7R5 613 aa15.02□□□□□ -0.01
SYNE3-202ENST00000553340 MRPS17Q9Y2R5 130 aaKnown RBP15.02□□□□□ -0.01
SYNE3-202ENST00000553340 SERPINE2P07093 398 aa15.01□□□□□ -0.01
SYNE3-202ENST00000553340 UMODP07911 640 aa15.01□□□□□ -0.01
SYNE3-202ENST00000553340 SLC25A6P12236 298 aa15.01□□□□□ -0.01
SYNE3-202ENST00000553340 SRD5A2P31213 254 aa15.01□□□□□ -0.01
SYNE3-202ENST00000553340 GGNQ86UU5 652 aa15.01□□□□□ -0.01
SYNE3-202ENST00000553340 OR56B2PQ8NGI1 322 aa15.01□□□□□ -0.01
SYNE3-202ENST00000553340 RSG1Q9BU20 258 aa15.01□□□□□ -0.01
SYNE3-202ENST00000553340 LRFN1Q9P244 771 aa15.01□□□□□ -0.01
SYNE3-202ENST00000553340 WNT16Q9UBV4 365 aa15.01□□□□□ -0.01
SYNE3-202ENST00000553340 RNF150Q9ULK6 438 aa15.01□□□□□ -0.01
SYNE3-202ENST00000553340 A0A0G2JRQ6 117 aa15.01□□□□□ -0.01
SYNE3-202ENST00000553340 MMP7P09237 267 aaPredicted RBP15.01□□□□□ -0.01
SYNE3-202ENST00000553340 LBX1P52954 281 aa15.01□□□□□ -0.01
SYNE3-202ENST00000553340 PRDX4Q13162 271 aa15.01□□□□□ -0.01
SYNE3-202ENST00000553340 GAMTQ14353 236 aa15.01□□□□□ -0.01
SYNE3-202ENST00000553340 LCN15Q6UWW0 184 aa15.01□□□□□ -0.01
SYNE3-202ENST00000553340 RNASE11Q8TAA1 199 aaKnown RBP15.01□□□□□ -0.01
SYNE3-202ENST00000553340 C14orf144Q96I85 54 aa15.01□□□□□ -0.01
SYNE3-202ENST00000553340 UFSP2Q9NUQ7 469 aa15.01□□□□□ -0.01
SYNE3-202ENST00000553340 LY6G6EA0A0G2JKS1 128 aa15□□□□□ -0.01
SYNE3-202ENST00000553340 GPM6AP51674 278 aa15□□□□□ -0.01
SYNE3-202ENST00000553340 C4orf17Q53FE4 359 aa15□□□□□ -0.01
SYNE3-202ENST00000553340 CPEB3Q8NE35 698 aaKnown RBP15□□□□□ -0.01
SYNE3-202ENST00000553340 MBD3L1Q8WWY6 194 aa15□□□□□ -0.01
SYNE3-202ENST00000553340 RCC1LQ96I51 464 aaKnown RBP15□□□□□ -0.01
SYNE3-202ENST00000553340 RHOVQ96L33 236 aa15□□□□□ -0.01
SYNE3-202ENST00000553340 HS3ST6Q96QI5 342 aa15□□□□□ -0.01
SYNE3-202ENST00000553340 P2RX4Q99571 388 aa15□□□□□ -0.01
SYNE3-202ENST00000553340 CABLES2Q9BTV7 478 aa15□□□□□ -0.01
SYNE3-202ENST00000553340 SDF2L1Q9HCN8 221 aa15□□□□□ -0.01
SYNE3-202ENST00000553340 U3KQA8 63 aa15□□□□□ -0.01
SYNE3-202ENST00000553340 TRBV24-1A0A075B6N3 115 aa15□□□□□ -0.01
SYNE3-202ENST00000553340 OPN1MWP04001 364 aa15□□□□□ -0.01
SYNE3-202ENST00000553340 OPN1MW2P0DN77 364 aa15□□□□□ -0.01
SYNE3-202ENST00000553340 OPN1MW3P0DN78 364 aa15□□□□□ -0.01
SYNE3-202ENST00000553340 FGF5P12034 268 aa15□□□□□ -0.01
SYNE3-202ENST00000553340 PKIAP61925 76 aa15□□□□□ -0.01
SYNE3-202ENST00000553340 ABLIM2Q6H8Q1 611 aa15□□□□□ -0.01
SYNE3-202ENST00000553340 ZNF295-AS1Q8N0V1 137 aa15□□□□□ -0.01
SYNE3-202ENST00000553340 RIMS4Q9H426 269 aaPredicted RBP15□□□□□ -0.01
SYNE3-202ENST00000553340 TRAPPC2LH3BP13 241 aa14.99□□□□□ -0.01
SYNE3-202ENST00000553340 GDF9O60383 454 aa14.99□□□□□ -0.01
SYNE3-202ENST00000553340 EPHA8P29322 1005 aaPredicted RBP14.99□□□□□ -0.01
SYNE3-202ENST00000553340 MLF1P58340 268 aa14.99□□□□□ -0.01
SYNE3-202ENST00000553340 COL19A1Q14993 1142 aa14.99□□□□□ -0.01
SYNE3-202ENST00000553340 COLCA1Q6ZS62 124 aa14.99□□□□□ -0.01
SYNE3-202ENST00000553340 OR51H1Q8NH63 302 aa14.99□□□□□ -0.01
SYNE3-202ENST00000553340 CA5BP1Q8WTZ4 195 aa14.99□□□□□ -0.01
SYNE3-202ENST00000553340 PACRGQ96M98 296 aaPredicted RBP14.99□□□□□ -0.01
SYNE3-202ENST00000553340 PSMG3Q9BT73 122 aaPredicted RBP14.99□□□□□ -0.01
SYNE3-202ENST00000553340 IL36RNQ9UBH0 155 aa14.99□□□□□ -0.01
SYNE3-202ENST00000553340 KIAA1324LA8MWY0 1029 aaPredicted RBP14.99□□□□□ -0.01
SYNE3-202ENST00000553340 TSTD3H0UI37 97 aa14.99□□□□□ -0.01
SYNE3-202ENST00000553340 PCSK4Q6UW60 755 aa14.99□□□□□ -0.01
SYNE3-202ENST00000553340 OR10D3Q8NH80 312 aa14.99□□□□□ -0.01
SYNE3-202ENST00000553340 CTDSP1Q9GZU7 261 aa14.99□□□□□ -0.01
SYNE3-202ENST00000553340 MTCH1Q9NZJ7 389 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms