RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 ELOA3CA0A087WX78 387 aaPredicted RBP4.56□□□□□ -1.68
PROM1-220ENST00000540805 A0A0A6YYD4 124 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 A0A0U1RQK1 487 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 A0A1B0GUS0 222 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 CEBPZOSA8MTT3 80 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 SDCBPO00560 298 aaPredicted RBP4.56□□□□□ -1.68
PROM1-220ENST00000540805 DLEU1O43261 78 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 NXPH3O95157 252 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 MT-ATP6P00846 226 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 TK1P04183 234 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 TRGC1P0CF51 173 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 WNT5AP41221 380 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 TNFSF10P50591 281 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 ZNF117Q03924 483 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 FOXF1Q12946 379 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 CNN3Q15417 329 aaKnown RBP4.56□□□□□ -1.68
PROM1-220ENST00000540805 HAGHQ16775 308 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 CEACAM16Q2WEN9 425 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 ZNF766Q5HY98 468 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 PLAC9Q5JTB6 97 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 KCNG3Q8TAE7 436 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 SPACA9Q96E40 222 aaPredicted RBP4.56□□□□□ -1.68
PROM1-220ENST00000540805 HIST1H2BLQ99880 126 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 FAAP24Q9BTP7 215 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 ARV1Q9H2C2 271 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 NELFAQ9H3P2 528 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 GPR173Q9NS66 373 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 CEP295Q9C0D2 2601 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 USP9XQ93008 2570 aaPredicted RBP4.56□□□□□ -1.68
PROM1-220ENST00000540805 A0A087WZY1 265 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 OR5H15A6NDH6 313 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 OR5H1A6NKK0 313 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 E5RGE8 158 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 H0YIG0 161 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 SPRY3O43610 288 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 MSR1P21757 451 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 P2RY1P47900 373 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 SOX8P57073 446 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 HIST2H3PS2Q5TEC6 136 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 AADACL3Q5VUY0 350 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 SGPP2Q8IWX5 399 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 GJC3Q8NFK1 279 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 OR6X1Q8NH79 312 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 OIT3Q8WWZ8 545 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 ZNF524Q96C55 264 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 KLHDC3Q9BQ90 382 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 GINS3Q9BRX5 216 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 TUBD1Q9UJT1 453 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 RNF24Q9Y225 148 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 NSG2Q9Y328 171 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 PHF3Q92576 2039 aaKnown RBP4.56□□□□□ -1.68
PROM1-220ENST00000540805 A0A1B0GW64 132 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 LILRA5A6NI73 299 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 CD300LBA8K4G0 201 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 H0YL77 283 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 GPR137BO60478 399 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 LYZL6O75951 148 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 CNIH1O95406 144 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 TTRP02766 147 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 CDAP32320 146 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 PPP1CCP36873 323 aaKnown RBP4.56□□□□□ -1.68
PROM1-220ENST00000540805 TAGLN2P37802 199 aaKnown RBP4.56□□□□□ -1.68
PROM1-220ENST00000540805 IGLV3-21P80748 117 aaPredicted RBP4.56□□□□□ -1.68
PROM1-220ENST00000540805 FUT7Q11130 342 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 GGNBP1Q5YKI7 109 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 OR56B2PQ8NGI1 322 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 FAM213BQ8TBF2 198 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 C22orf15Q8WYQ4 148 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 ARHGAP5-AS1Q96IT6 56 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 SMDT1Q9H4I9 107 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 HIVEP2P31629 2446 aa4.56□□□□□ -1.68
PROM1-220ENST00000540805 MASP2O00187 686 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 ADAM10O14672 748 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 ZNF205O95201 554 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 IGHMP01871 453 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 MMP9P14780 707 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 OPRM1P35372 400 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 ECI1P42126 302 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 GABRA4P48169 554 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 MMP16P51512 607 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 UBE2KP61086 200 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 RBX1P62877 108 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 CCL20P78556 96 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 PDCD1Q15116 288 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 RAB35Q15286 201 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 TBC1D28Q2M2D7 210 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 Q5PR19 223 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 TMEM182Q6ZP80 229 aaPredicted RBP4.55□□□□□ -1.68
PROM1-220ENST00000540805 SULF2Q8IWU5 870 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 HSD17B11Q8NBQ5 300 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 SLC26A10Q8NG04 563 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 MRPL24Q96A35 216 aaKnown RBP4.55□□□□□ -1.68
PROM1-220ENST00000540805 TIMD4Q96H15 378 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 NDUFAF3Q9BU61 184 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 ABHD14AQ9BUJ0 271 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 PBOV1Q9GZY1 135 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 ASCL3Q9NQ33 180 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 RPH3ALQ9UNE2 315 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 PIGLQ9Y2B2 252 aa4.55□□□□□ -1.68
PROM1-220ENST00000540805 POLQO75417 2590 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms