RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 MYCNOSP40205 109 aa15.54■□□□□ 0.08
TNFRSF1B-204ENST00000536782 ZNF816Q0VGE8 651 aaPredicted RBP15.54■□□□□ 0.08
TNFRSF1B-204ENST00000536782 C8orf86Q6ZUL3 223 aa15.54■□□□□ 0.08
TNFRSF1B-204ENST00000536782 MOB3BQ86TA1 216 aa15.54■□□□□ 0.08
TNFRSF1B-204ENST00000536782 METTL9Q9H1A3 318 aa15.54■□□□□ 0.08
TNFRSF1B-204ENST00000536782 IFT22Q9H7X7 185 aa15.54■□□□□ 0.08
TNFRSF1B-204ENST00000536782 ZNF581Q9P0T4 197 aa15.54■□□□□ 0.08
TNFRSF1B-204ENST00000536782 ING4Q9UNL4 249 aa15.54■□□□□ 0.08
TNFRSF1B-204ENST00000536782 IGHV1-3A0A0C4DH29 117 aa15.53■□□□□ 0.08
TNFRSF1B-204ENST00000536782 TMEM30CPA0ZSE6 113 aa15.53■□□□□ 0.08
TNFRSF1B-204ENST00000536782 CCRL2O00421 344 aa15.53■□□□□ 0.08
TNFRSF1B-204ENST00000536782 LIMS3P0CW19 117 aa15.53■□□□□ 0.08
TNFRSF1B-204ENST00000536782 LIMS4P0CW20 117 aa15.53■□□□□ 0.08
TNFRSF1B-204ENST00000536782 RBM11P57052 281 aaKnown RBP15.53■□□□□ 0.08
TNFRSF1B-204ENST00000536782 PPP3R1P63098 170 aa15.53■□□□□ 0.08
TNFRSF1B-204ENST00000536782 EBI3Q14213 229 aa15.53■□□□□ 0.08
TNFRSF1B-204ENST00000536782 CCDC58Q4VC31 144 aa15.53■□□□□ 0.08
TNFRSF1B-204ENST00000536782 NHLRC3Q5JS37 347 aa15.53■□□□□ 0.08
TNFRSF1B-204ENST00000536782 C11orf87Q6NUJ2 197 aa15.53■□□□□ 0.08
TNFRSF1B-204ENST00000536782 RPL22L1Q6P5R6 122 aaKnown RBP15.53■□□□□ 0.08
TNFRSF1B-204ENST00000536782 C18orf65Q6ZTR6 163 aa15.53■□□□□ 0.08
TNFRSF1B-204ENST00000536782 STPG2Q8N412 459 aa15.53■□□□□ 0.08
TNFRSF1B-204ENST00000536782 KLHL30-AS1Q8NEE0 82 aa15.53■□□□□ 0.08
TNFRSF1B-204ENST00000536782 OR52N1Q8NH53 320 aa15.53■□□□□ 0.08
TNFRSF1B-204ENST00000536782 TMEM106AQ96A25 262 aa15.53■□□□□ 0.08
TNFRSF1B-204ENST00000536782 S100A13Q99584 98 aa15.53■□□□□ 0.08
TNFRSF1B-204ENST00000536782 TMEM138Q9NPI0 162 aa15.53■□□□□ 0.08
TNFRSF1B-204ENST00000536782 IL36GQ9NZH8 169 aa15.53■□□□□ 0.08
TNFRSF1B-204ENST00000536782 NCBP2LA6PVI3 153 aaKnown RBP15.52■□□□□ 0.08
TNFRSF1B-204ENST00000536782 CASQ2O14958 399 aaPredicted RBP15.52■□□□□ 0.08
TNFRSF1B-204ENST00000536782 ZNF93P35789 620 aaPredicted RBP15.52■□□□□ 0.08
TNFRSF1B-204ENST00000536782 REG1BP48304 166 aa15.52■□□□□ 0.08
TNFRSF1B-204ENST00000536782 LRRC36Q1X8D7 754 aa15.52■□□□□ 0.08
TNFRSF1B-204ENST00000536782 DDI2Q5TDH0 399 aa15.52■□□□□ 0.08
TNFRSF1B-204ENST00000536782 TTC23Q5W5X9 447 aa15.52■□□□□ 0.08
TNFRSF1B-204ENST00000536782 XAF1Q6GPH4 301 aa15.52■□□□□ 0.08
TNFRSF1B-204ENST00000536782 LINC00596Q86U02 117 aa15.52■□□□□ 0.08
TNFRSF1B-204ENST00000536782 OR52M1Q8NGK5 317 aa15.52■□□□□ 0.08
TNFRSF1B-204ENST00000536782 APH1BQ8WW43 257 aa15.52■□□□□ 0.08
TNFRSF1B-204ENST00000536782 ARL11Q969Q4 196 aa15.52■□□□□ 0.08
TNFRSF1B-204ENST00000536782 EAF1Q96JC9 268 aaPredicted RBP15.52■□□□□ 0.08
TNFRSF1B-204ENST00000536782 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.52■□□□□ 0.08
TNFRSF1B-204ENST00000536782 PAK1IP1Q9NWT1 392 aaPredicted RBP15.52■□□□□ 0.08
TNFRSF1B-204ENST00000536782 SDCBPO00560 298 aaPredicted RBP15.51■□□□□ 0.07
TNFRSF1B-204ENST00000536782 GEMIN2O14893 280 aaKnown RBP15.51■□□□□ 0.07
TNFRSF1B-204ENST00000536782 SERPINA2P20848 420 aa15.51■□□□□ 0.07
TNFRSF1B-204ENST00000536782 CD69Q07108 199 aa15.51■□□□□ 0.07
TNFRSF1B-204ENST00000536782 ATAD3CQ5T2N8 411 aa15.51■□□□□ 0.07
TNFRSF1B-204ENST00000536782 UNQ9370/PRO34162Q6UXP9 181 aa15.51■□□□□ 0.07
TNFRSF1B-204ENST00000536782 TGIF2LXQ8IUE1 241 aa15.51■□□□□ 0.07
TNFRSF1B-204ENST00000536782 ZNF695Q8IW36 515 aa15.51■□□□□ 0.07
TNFRSF1B-204ENST00000536782 IZUMO1Q8IYV9 350 aa15.51■□□□□ 0.07
TNFRSF1B-204ENST00000536782 LINC00311Q8N616 119 aa15.51■□□□□ 0.07
TNFRSF1B-204ENST00000536782 P2RX4Q99571 388 aa15.51■□□□□ 0.07
TNFRSF1B-204ENST00000536782 FGF20Q9NP95 211 aaPredicted RBP15.51■□□□□ 0.07
TNFRSF1B-204ENST00000536782 IGHV3-72A0A0B4J1Y9 119 aa15.5■□□□□ 0.07
TNFRSF1B-204ENST00000536782 LINC01548A6NM66 108 aa15.5■□□□□ 0.07
TNFRSF1B-204ENST00000536782 C15orf65H3BRN8 121 aa15.5■□□□□ 0.07
TNFRSF1B-204ENST00000536782 AP4M1O00189 453 aa15.5■□□□□ 0.07
TNFRSF1B-204ENST00000536782 ORC5O43913 435 aa15.5■□□□□ 0.07
TNFRSF1B-204ENST00000536782 ZNF780AO75290 641 aaPredicted RBP15.5■□□□□ 0.07
TNFRSF1B-204ENST00000536782 BDKRB2P30411 391 aa15.5■□□□□ 0.07
TNFRSF1B-204ENST00000536782 DCTN2Q13561 401 aaKnown RBP15.5■□□□□ 0.07
TNFRSF1B-204ENST00000536782 MPV17LQ2QL34 196 aa15.5■□□□□ 0.07
TNFRSF1B-204ENST00000536782 OGFRL1Q5TC84 451 aaPredicted RBP15.5■□□□□ 0.07
TNFRSF1B-204ENST00000536782 TEX38Q6PEX7 206 aa15.5■□□□□ 0.07
TNFRSF1B-204ENST00000536782 TMPRSS11AQ6ZMR5 421 aa15.5■□□□□ 0.07
TNFRSF1B-204ENST00000536782 C8orf31Q8N9H6 132 aa15.5■□□□□ 0.07
TNFRSF1B-204ENST00000536782 SETD9Q8NE22 299 aa15.5■□□□□ 0.07
TNFRSF1B-204ENST00000536782 OR2T10Q8NGZ9 312 aa15.5■□□□□ 0.07
TNFRSF1B-204ENST00000536782 NEK7Q8TDX7 302 aa15.5■□□□□ 0.07
TNFRSF1B-204ENST00000536782 CCDC107Q8WV48 283 aa15.5■□□□□ 0.07
TNFRSF1B-204ENST00000536782 GON7Q9BXV9 100 aa15.5■□□□□ 0.07
TNFRSF1B-204ENST00000536782 LIN7CQ9NUP9 197 aaKnown RBP15.5■□□□□ 0.07
TNFRSF1B-204ENST00000536782 ZMAT5Q9UDW3 170 aaKnown RBP15.5■□□□□ 0.07
TNFRSF1B-204ENST00000536782 ANKRD65E5RJM6 399 aa15.49■□□□□ 0.07
TNFRSF1B-204ENST00000536782 WBP4O75554 376 aaKnown RBP15.49■□□□□ 0.07
TNFRSF1B-204ENST00000536782 IL3RAP26951 378 aa15.49■□□□□ 0.07
TNFRSF1B-204ENST00000536782 DCKP27707 260 aa15.49■□□□□ 0.07
TNFRSF1B-204ENST00000536782 GPR12P47775 334 aa15.49■□□□□ 0.07
TNFRSF1B-204ENST00000536782 ETV1P50549 477 aa15.49■□□□□ 0.07
TNFRSF1B-204ENST00000536782 PNLIPRP3Q17RR3 467 aa15.49■□□□□ 0.07
TNFRSF1B-204ENST00000536782 OR2G6Q5TZ20 316 aa15.49■□□□□ 0.07
TNFRSF1B-204ENST00000536782 DHRSXQ8N5I4 330 aa15.49■□□□□ 0.07
TNFRSF1B-204ENST00000536782 Q8N6K4 173 aa15.49■□□□□ 0.07
TNFRSF1B-204ENST00000536782 UBALD1Q8TB05 177 aa15.49■□□□□ 0.07
TNFRSF1B-204ENST00000536782 CYGBQ8WWM9 190 aa15.49■□□□□ 0.07
TNFRSF1B-204ENST00000536782 B9D2Q9BPU9 175 aa15.49■□□□□ 0.07
TNFRSF1B-204ENST00000536782 ABCG5Q9H222 651 aa15.49■□□□□ 0.07
TNFRSF1B-204ENST00000536782 DCLRE1BQ9H816 532 aa15.49■□□□□ 0.07
TNFRSF1B-204ENST00000536782 GFOD1Q9NXC2 390 aa15.49■□□□□ 0.07
TNFRSF1B-204ENST00000536782 IRGMA1A4Y4 181 aa15.48■□□□□ 0.07
TNFRSF1B-204ENST00000536782 GTF2F2P13984 249 aa15.48■□□□□ 0.07
TNFRSF1B-204ENST00000536782 ADARB1P78563 741 aaKnown RBP15.48■□□□□ 0.07
TNFRSF1B-204ENST00000536782 RIPK1Q13546 671 aa15.48■□□□□ 0.07
TNFRSF1B-204ENST00000536782 SMN1Q16637 294 aaKnown RBP15.48■□□□□ 0.07
TNFRSF1B-204ENST00000536782 SLC22A6Q4U2R8 563 aa15.48■□□□□ 0.07
TNFRSF1B-204ENST00000536782 STX19Q8N4C7 294 aa15.48■□□□□ 0.07
TNFRSF1B-204ENST00000536782 RTN4IP1Q8WWV3 396 aaPredicted RBP15.48■□□□□ 0.07
TNFRSF1B-204ENST00000536782 ORAI1Q96D31 301 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms