RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 RIMS4Q9H426 269 aaPredicted RBP11.05□□□□□ -0.64
RPAIN-205ENST00000536255 PRDM13Q9H4Q3 707 aa11.05□□□□□ -0.64
RPAIN-205ENST00000536255 CALYQ9NYX4 217 aa11.05□□□□□ -0.64
RPAIN-205ENST00000536255 TRAPPC2LQ9UL33 140 aa11.05□□□□□ -0.64
RPAIN-205ENST00000536255 ETV7Q9Y603 341 aa11.05□□□□□ -0.64
RPAIN-205ENST00000536255 A0A0A6YYD4 124 aa11.04□□□□□ -0.64
RPAIN-205ENST00000536255 CLDN34H7C241 214 aa11.04□□□□□ -0.64
RPAIN-205ENST00000536255 NPFFO15130 113 aa11.04□□□□□ -0.64
RPAIN-205ENST00000536255 SOCS1O15524 211 aa11.04□□□□□ -0.64
RPAIN-205ENST00000536255 ORC5O43913 435 aa11.04□□□□□ -0.64
RPAIN-205ENST00000536255 NOL3O60936 208 aaKnown RBP11.04□□□□□ -0.64
RPAIN-205ENST00000536255 TGFBR1P36897 503 aa11.04□□□□□ -0.64
RPAIN-205ENST00000536255 RPS19P39019 145 aaKnown RBP11.04□□□□□ -0.64
RPAIN-205ENST00000536255 DLX1P56177 255 aa11.04□□□□□ -0.64
RPAIN-205ENST00000536255 LGALS4P56470 323 aa11.04□□□□□ -0.64
RPAIN-205ENST00000536255 MRPS15P82914 257 aaKnown RBP11.04□□□□□ -0.64
RPAIN-205ENST00000536255 ARL6IP1Q15041 203 aa11.04□□□□□ -0.64
RPAIN-205ENST00000536255 MIDNQ504T8 468 aa11.04□□□□□ -0.64
RPAIN-205ENST00000536255 SLC16A12Q6ZSM3 486 aa11.04□□□□□ -0.64
RPAIN-205ENST00000536255 RTN4RL2Q86UN3 420 aa11.04□□□□□ -0.64
RPAIN-205ENST00000536255 GAPTQ8N292 157 aa11.04□□□□□ -0.64
RPAIN-205ENST00000536255 PNKDQ8N490 385 aa11.04□□□□□ -0.64
RPAIN-205ENST00000536255 OR10A7Q8NGE5 316 aa11.04□□□□□ -0.64
RPAIN-205ENST00000536255 LGALS14Q8TCE9 139 aa11.04□□□□□ -0.64
RPAIN-205ENST00000536255 ZDHHC16Q969W1 377 aa11.04□□□□□ -0.64
RPAIN-205ENST00000536255 PHF21AQ96BD5 680 aa11.04□□□□□ -0.64
RPAIN-205ENST00000536255 SULT4A1Q9BR01 284 aa11.04□□□□□ -0.64
RPAIN-205ENST00000536255 FAAP24Q9BTP7 215 aa11.04□□□□□ -0.64
RPAIN-205ENST00000536255 TMEM133Q9H2Q1 129 aa11.04□□□□□ -0.64
RPAIN-205ENST00000536255 LINC00574Q9H8X3 128 aa11.04□□□□□ -0.64
RPAIN-205ENST00000536255 KCNIP1Q9NZI2 227 aa11.04□□□□□ -0.64
RPAIN-205ENST00000536255 ABRACLQ9P1F3 81 aa11.04□□□□□ -0.64
RPAIN-205ENST00000536255 FAM96BQ9Y3D0 163 aa11.04□□□□□ -0.64
RPAIN-205ENST00000536255 DSCAML1Q8TD84 2053 aa11.04□□□□□ -0.64
RPAIN-205ENST00000536255 MEIOCA2RUB1 952 aa11.03□□□□□ -0.64
RPAIN-205ENST00000536255 SPINT2O43291 252 aa11.03□□□□□ -0.64
RPAIN-205ENST00000536255 PAHP00439 452 aa11.03□□□□□ -0.64
RPAIN-205ENST00000536255 RNASE1P07998 156 aaKnown RBP11.03□□□□□ -0.64
RPAIN-205ENST00000536255 CGB3P0DN86 165 aa11.03□□□□□ -0.64
RPAIN-205ENST00000536255 CGB7P0DN87 165 aa11.03□□□□□ -0.64
RPAIN-205ENST00000536255 SNRPBP14678 240 aaKnown RBP11.03□□□□□ -0.64
RPAIN-205ENST00000536255 COX7A1P24310 79 aa11.03□□□□□ -0.64
RPAIN-205ENST00000536255 EFNB2P52799 333 aa11.03□□□□□ -0.64
RPAIN-205ENST00000536255 PRB3Q04118 309 aaPredicted RBP11.03□□□□□ -0.64
RPAIN-205ENST00000536255 SLC9A3R2Q15599 337 aa11.03□□□□□ -0.64
RPAIN-205ENST00000536255 CTF1Q16619 201 aa11.03□□□□□ -0.64
RPAIN-205ENST00000536255 C17orf58Q2M2W7 97 aa11.03□□□□□ -0.64
RPAIN-205ENST00000536255 PRAMEF5Q5TYX0 476 aa11.03□□□□□ -0.64
RPAIN-205ENST00000536255 ZNF554Q86TJ5 538 aa11.03□□□□□ -0.64
RPAIN-205ENST00000536255 OR10R2Q8NGX6 335 aa11.03□□□□□ -0.64
RPAIN-205ENST00000536255 OR4K15Q8NH41 348 aa11.03□□□□□ -0.64
RPAIN-205ENST00000536255 RAB2BQ8WUD1 216 aa11.03□□□□□ -0.64
RPAIN-205ENST00000536255 CCDC107Q8WV48 283 aa11.03□□□□□ -0.64
RPAIN-205ENST00000536255 SLC25A46Q96AG3 418 aa11.03□□□□□ -0.64
RPAIN-205ENST00000536255 KCTD12Q96CX2 325 aaKnown RBP11.03□□□□□ -0.64
RPAIN-205ENST00000536255 RAB3CQ96E17 227 aa11.03□□□□□ -0.64
RPAIN-205ENST00000536255 ARHGAP5-AS1Q96IT6 56 aa11.03□□□□□ -0.64
RPAIN-205ENST00000536255 BCL7BQ9BQE9 202 aa11.03□□□□□ -0.64
RPAIN-205ENST00000536255 CLEC7AQ9BXN2 247 aa11.03□□□□□ -0.64
RPAIN-205ENST00000536255 PECRQ9BY49 303 aa11.03□□□□□ -0.64
RPAIN-205ENST00000536255 ATG5Q9H1Y0 275 aa11.03□□□□□ -0.64
RPAIN-205ENST00000536255 CHMP1AQ9HD42 196 aaPredicted RBP11.03□□□□□ -0.64
RPAIN-205ENST00000536255 IDI2-AS1Q9NZ38 188 aa11.03□□□□□ -0.64
RPAIN-205ENST00000536255 SPATA2Q9UM82 520 aa11.03□□□□□ -0.64
RPAIN-205ENST00000536255 KIAA2026Q5HYC2 2103 aa11.02□□□□□ -0.64
RPAIN-205ENST00000536255 IGHV2-26A0A0B4J1V2 119 aa11.02□□□□□ -0.65
RPAIN-205ENST00000536255 A0A0U1RQK1 487 aa11.02□□□□□ -0.65
RPAIN-205ENST00000536255 POM121CA8CG34 1229 aa11.02□□□□□ -0.65
RPAIN-205ENST00000536255 FOXI3A8MTJ6 420 aaPredicted RBP11.02□□□□□ -0.65
RPAIN-205ENST00000536255 NPIPB11E5RHQ5 1161 aa11.02□□□□□ -0.65
RPAIN-205ENST00000536255 RAB27BO00194 218 aa11.02□□□□□ -0.65
RPAIN-205ENST00000536255 HOXA3O43365 443 aaPredicted RBP11.02□□□□□ -0.65
RPAIN-205ENST00000536255 ARG1P05089 322 aa11.02□□□□□ -0.65
RPAIN-205ENST00000536255 FBP1P09467 338 aa11.02□□□□□ -0.65
RPAIN-205ENST00000536255 OMGP23515 440 aa11.02□□□□□ -0.65
RPAIN-205ENST00000536255 SSTR5P35346 364 aa11.02□□□□□ -0.65
RPAIN-205ENST00000536255 TMBIM6P55061 237 aa11.02□□□□□ -0.65
RPAIN-205ENST00000536255 TMEM50BP56557 158 aa11.02□□□□□ -0.65
RPAIN-205ENST00000536255 PLA2G7Q13093 441 aa11.02□□□□□ -0.65
RPAIN-205ENST00000536255 TMEM30BQ3MIR4 351 aa11.02□□□□□ -0.65
RPAIN-205ENST00000536255 HCP5Q6MZN7 132 aa11.02□□□□□ -0.65
RPAIN-205ENST00000536255 Q6YL49 198 aa11.02□□□□□ -0.65
RPAIN-205ENST00000536255 MOB1BQ7L9L4 216 aa11.02□□□□□ -0.65
RPAIN-205ENST00000536255 CLVS1Q8IUQ0 354 aaPredicted RBP11.02□□□□□ -0.65
RPAIN-205ENST00000536255 OR11H6Q8NGC7 330 aa11.02□□□□□ -0.65
RPAIN-205ENST00000536255 ZNF596Q8TC21 504 aa11.02□□□□□ -0.65
RPAIN-205ENST00000536255 MRPL30Q8TCC3 161 aaKnown RBP11.02□□□□□ -0.65
RPAIN-205ENST00000536255 DYRK2Q92630 601 aa11.02□□□□□ -0.65
RPAIN-205ENST00000536255 GCDHQ92947 438 aaPredicted RBP11.02□□□□□ -0.65
RPAIN-205ENST00000536255 ARL11Q969Q4 196 aa11.02□□□□□ -0.65
RPAIN-205ENST00000536255 KIRREL1Q96J84 757 aa11.02□□□□□ -0.65
RPAIN-205ENST00000536255 NAA50Q9GZZ1 169 aaKnown RBP11.02□□□□□ -0.65
RPAIN-205ENST00000536255 RHBDL2Q9NX52 303 aa11.02□□□□□ -0.65
RPAIN-205ENST00000536255 MGAT4AQ9UM21 535 aa11.02□□□□□ -0.65
RPAIN-205ENST00000536255 A0A0A6YYH2 397 aa11.01□□□□□ -0.65
RPAIN-205ENST00000536255 TRAV39A0A0B4J263 110 aa11.01□□□□□ -0.65
RPAIN-205ENST00000536255 A0A1W2PRD5 423 aa11.01□□□□□ -0.65
RPAIN-205ENST00000536255 A0A1W2PRF3 423 aa11.01□□□□□ -0.65
RPAIN-205ENST00000536255 A0A1W2PRM7 423 aa11.01□□□□□ -0.65
RPAIN-205ENST00000536255 TMEM89A2RUT3 159 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms