RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 OR2W1Q9Y3N9 320 aa14.92□□□□□ -0.02
USH1C-205ENST00000527020 TMEM50AO95807 157 aa14.92□□□□□ -0.02
USH1C-205ENST00000527020 ZNF44P15621 663 aa14.92□□□□□ -0.02
USH1C-205ENST00000527020 VDAC1P21796 283 aa14.92□□□□□ -0.02
USH1C-205ENST00000527020 SNCAP37840 140 aa14.92□□□□□ -0.02
USH1C-205ENST00000527020 ERVK11-1P61568 191 aa14.92□□□□□ -0.02
USH1C-205ENST00000527020 ALKBH6Q3KRA9 238 aa14.92□□□□□ -0.02
USH1C-205ENST00000527020 SCCPDHQ8NBX0 429 aa14.92□□□□□ -0.02
USH1C-205ENST00000527020 TRAV39A0A0B4J263 110 aa14.91□□□□□ -0.02
USH1C-205ENST00000527020 J3QW42 95 aa14.91□□□□□ -0.02
USH1C-205ENST00000527020 DEGS1O15121 323 aa14.91□□□□□ -0.02
USH1C-205ENST00000527020 NKX2-8O15522 239 aa14.91□□□□□ -0.02
USH1C-205ENST00000527020 SSSCA1O60232 199 aa14.91□□□□□ -0.02
USH1C-205ENST00000527020 NFYBP25208 207 aa14.91□□□□□ -0.02
USH1C-205ENST00000527020 IDH3GP51553 393 aaPredicted RBP14.91□□□□□ -0.02
USH1C-205ENST00000527020 PPP1CBP62140 327 aa14.91□□□□□ -0.02
USH1C-205ENST00000527020 ID3Q02535 119 aa14.91□□□□□ -0.02
USH1C-205ENST00000527020 CMTM1Q8IZ96 169 aa14.91□□□□□ -0.02
USH1C-205ENST00000527020 GCNT2Q8N0V5 402 aa14.91□□□□□ -0.02
USH1C-205ENST00000527020 OR10J5Q8NHC4 309 aa14.91□□□□□ -0.02
USH1C-205ENST00000527020 ABHD14BQ96IU4 210 aa14.91□□□□□ -0.02
USH1C-205ENST00000527020 RTL8AQ9BWD3 113 aa14.91□□□□□ -0.02
USH1C-205ENST00000527020 LYRM2Q9NU23 88 aaPredicted RBP14.91□□□□□ -0.02
USH1C-205ENST00000527020 OR1A1Q9P1Q5 309 aa14.91□□□□□ -0.02
USH1C-205ENST00000527020 RFNGQ9Y644 331 aa14.91□□□□□ -0.02
USH1C-205ENST00000527020 LRP5LA4QPB2 252 aa14.91□□□□□ -0.02
USH1C-205ENST00000527020 PROB1E7EW31 1015 aa14.91□□□□□ -0.02
USH1C-205ENST00000527020 TSPAN15O95858 294 aa14.91□□□□□ -0.02
USH1C-205ENST00000527020 F2RP25116 425 aa14.91□□□□□ -0.02
USH1C-205ENST00000527020 P4HA3Q7Z4N8 544 aa14.91□□□□□ -0.02
USH1C-205ENST00000527020 TMEM171Q8WVE6 324 aa14.91□□□□□ -0.02
USH1C-205ENST00000527020 IL22RA2Q969J5 263 aa14.91□□□□□ -0.02
USH1C-205ENST00000527020 C19orf12Q9NSK7 152 aa14.91□□□□□ -0.02
USH1C-205ENST00000527020 LUZP4Q9P127 313 aa14.91□□□□□ -0.02
USH1C-205ENST00000527020 ERRFI1Q9UJM3 462 aaPredicted RBP14.91□□□□□ -0.02
USH1C-205ENST00000527020 GTF3C1Q12789 2109 aa14.91□□□□□ -0.02
USH1C-205ENST00000527020 SPENQ96T58 3664 aaKnown RBP14.9□□□□□ -0.02
USH1C-205ENST00000527020 ZFHX4Q86UP3 3567 aa14.9□□□□□ -0.02
USH1C-205ENST00000527020 A0A0G2JRQ6 117 aa14.9□□□□□ -0.02
USH1C-205ENST00000527020 CDRT15L2A8MXV6 281 aa14.9□□□□□ -0.02
USH1C-205ENST00000527020 NPIPB11E5RHQ5 1161 aa14.9□□□□□ -0.02
USH1C-205ENST00000527020 LYZL6O75951 148 aa14.9□□□□□ -0.02
USH1C-205ENST00000527020 IGLV2-14P01704 120 aa14.9□□□□□ -0.02
USH1C-205ENST00000527020 IGHG3P01860 377 aa14.9□□□□□ -0.02
USH1C-205ENST00000527020 ZNF616Q08AN1 781 aa14.9□□□□□ -0.02
USH1C-205ENST00000527020 GUSBP1Q15486 140 aa14.9□□□□□ -0.02
USH1C-205ENST00000527020 PIP4P1Q86T03 277 aa14.9□□□□□ -0.02
USH1C-205ENST00000527020 TMEM252Q8N6L7 170 aa14.9□□□□□ -0.02
USH1C-205ENST00000527020 GLRX2Q9NS18 164 aa14.9□□□□□ -0.02
USH1C-205ENST00000527020 TAAR3PQ9P1P4 343 aa14.9□□□□□ -0.02
USH1C-205ENST00000527020 NDRG3Q9UGV2 375 aa14.9□□□□□ -0.02
USH1C-205ENST00000527020 SLC33A1O00400 549 aaPredicted RBP14.9□□□□□ -0.02
USH1C-205ENST00000527020 PITX3O75364 302 aa14.9□□□□□ -0.02
USH1C-205ENST00000527020 OR2H2O95918 312 aa14.9□□□□□ -0.02
USH1C-205ENST00000527020 CAMLGP49069 296 aa14.9□□□□□ -0.02
USH1C-205ENST00000527020 CLINT1Q14677 625 aa14.9□□□□□ -0.02
USH1C-205ENST00000527020 AKR1E2Q96JD6 320 aa14.9□□□□□ -0.02
USH1C-205ENST00000527020 PLEKHF2Q9H8W4 249 aa14.9□□□□□ -0.02
USH1C-205ENST00000527020 MED19A0JLT2 244 aaPredicted RBP14.89□□□□□ -0.03
USH1C-205ENST00000527020 K7N7A8 449 aa14.89□□□□□ -0.03
USH1C-205ENST00000527020 SIRPB1O00241 398 aa14.89□□□□□ -0.03
USH1C-205ENST00000527020 NXPH3O95157 252 aa14.89□□□□□ -0.03
USH1C-205ENST00000527020 PVALBP20472 110 aaPredicted RBP14.89□□□□□ -0.03
USH1C-205ENST00000527020 RAB5CP51148 216 aa14.89□□□□□ -0.03
USH1C-205ENST00000527020 ZNF154Q13106 437 aa14.89□□□□□ -0.03
USH1C-205ENST00000527020 TESK1Q15569 626 aa14.89□□□□□ -0.03
USH1C-205ENST00000527020 ZNF497Q6ZNH5 498 aa14.89□□□□□ -0.03
USH1C-205ENST00000527020 FDCSPQ8NFU4 85 aa14.89□□□□□ -0.03
USH1C-205ENST00000527020 SLC25A40Q8TBP6 338 aa14.89□□□□□ -0.03
USH1C-205ENST00000527020 CDH20Q9HBT6 801 aa14.89□□□□□ -0.03
USH1C-205ENST00000527020 RNF115Q9Y4L5 304 aa14.89□□□□□ -0.03
USH1C-205ENST00000527020 PRR14LQ5THK1 2151 aa14.89□□□□□ -0.03
USH1C-205ENST00000527020 CFAP47Q6ZTR5 3102 aa14.89□□□□□ -0.03
USH1C-205ENST00000527020 DSPP15924 2871 aaKnown RBP14.89□□□□□ -0.03
USH1C-205ENST00000527020 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.88□□□□□ -0.03
USH1C-205ENST00000527020 PGA5P0DJD9 388 aa14.88□□□□□ -0.03
USH1C-205ENST00000527020 OMGP23515 440 aa14.88□□□□□ -0.03
USH1C-205ENST00000527020 GABRA6Q16445 453 aa14.88□□□□□ -0.03
USH1C-205ENST00000527020 TMEM182Q6ZP80 229 aaPredicted RBP14.88□□□□□ -0.03
USH1C-205ENST00000527020 COMMD1Q8N668 190 aa14.88□□□□□ -0.03
USH1C-205ENST00000527020 IL1F10Q8WWZ1 152 aa14.88□□□□□ -0.03
USH1C-205ENST00000527020 AIFM2Q9BRQ8 373 aa14.88□□□□□ -0.03
USH1C-205ENST00000527020 TREM2Q9NZC2 230 aa14.88□□□□□ -0.03
USH1C-205ENST00000527020 STRAPQ9Y3F4 350 aaKnown RBP14.88□□□□□ -0.03
USH1C-205ENST00000527020 ASPMQ8IZT6 3477 aa14.88□□□□□ -0.03
USH1C-205ENST00000527020 KIAA2026Q5HYC2 2103 aa14.88□□□□□ -0.03
USH1C-205ENST00000527020 IGHV3-64DA0A0J9YX35 117 aa14.88□□□□□ -0.03
USH1C-205ENST00000527020 WT1P19544 449 aaPredicted RBP14.88□□□□□ -0.03
USH1C-205ENST00000527020 MDH2P40926 338 aaKnown RBP14.88□□□□□ -0.03
USH1C-205ENST00000527020 CCL11P51671 97 aa14.88□□□□□ -0.03
USH1C-205ENST00000527020 PAX9P55771 341 aa14.88□□□□□ -0.03
USH1C-205ENST00000527020 UBE2NP61088 152 aaKnown RBP14.88□□□□□ -0.03
USH1C-205ENST00000527020 PSG7Q13046 419 aa14.88□□□□□ -0.03
USH1C-205ENST00000527020 GUK1Q16774 197 aa14.88□□□□□ -0.03
USH1C-205ENST00000527020 OR51H1Q8NH63 302 aa14.88□□□□□ -0.03
USH1C-205ENST00000527020 CACNA1HO95180 2353 aa14.88□□□□□ -0.03
USH1C-205ENST00000527020 IQCF6A8MYZ5 107 aa14.87□□□□□ -0.03
USH1C-205ENST00000527020 H0YL77 283 aa14.87□□□□□ -0.03
USH1C-205ENST00000527020 CDIPTO14735 213 aa14.87□□□□□ -0.03
USH1C-205ENST00000527020 HEXAP06865 529 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms