RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 TMEM75Q8N9X5 138 aa4.05□□□□□ -1.76
NIPBL-204ENST00000504430 NPRL2Q8WTW4 380 aa4.05□□□□□ -1.76
NIPBL-204ENST00000504430 THEM6Q8WUY1 208 aa4.05□□□□□ -1.76
NIPBL-204ENST00000504430 OR51I2Q9H344 312 aa4.05□□□□□ -1.76
NIPBL-204ENST00000504430 FAIMQ9NVQ4 179 aa4.05□□□□□ -1.76
NIPBL-204ENST00000504430 DNMT1P26358 1616 aaKnown RBP4.05□□□□□ -1.76
NIPBL-204ENST00000504430 WDR7Q9Y4E6 1490 aa4.05□□□□□ -1.76
NIPBL-204ENST00000504430 TMED7-TICAM2A0A0A6YYA0 188 aa4.05□□□□□ -1.76
NIPBL-204ENST00000504430 LOC107984640A0A0U1RRK4 108 aa4.05□□□□□ -1.76
NIPBL-204ENST00000504430 MYBPHLA2RUH7 354 aa4.05□□□□□ -1.76
NIPBL-204ENST00000504430 FAM25AB3EWG3 89 aa4.05□□□□□ -1.76
NIPBL-204ENST00000504430 FAM25CB3EWG5 89 aa4.05□□□□□ -1.76
NIPBL-204ENST00000504430 FAM25GB3EWG6 89 aa4.05□□□□□ -1.76
NIPBL-204ENST00000504430 SRSF10O75494 262 aaKnown RBP4.05□□□□□ -1.76
NIPBL-204ENST00000504430 ATF1P18846 271 aa4.05□□□□□ -1.76
NIPBL-204ENST00000504430 SELENOTP62341 195 aa4.05□□□□□ -1.76
NIPBL-204ENST00000504430 KLF9Q13886 244 aaPredicted RBP4.05□□□□□ -1.76
NIPBL-204ENST00000504430 FAM222AQ5U5X8 452 aa4.05□□□□□ -1.76
NIPBL-204ENST00000504430 CLEC20AQ6ZU45 233 aa4.05□□□□□ -1.76
NIPBL-204ENST00000504430 STPG4Q8N801 248 aa4.05□□□□□ -1.76
NIPBL-204ENST00000504430 OR8B12Q8NGG6 310 aa4.05□□□□□ -1.76
NIPBL-204ENST00000504430 OR13C8Q8NGS7 320 aa4.05□□□□□ -1.76
NIPBL-204ENST00000504430 OR2A12Q8NGT7 310 aa4.05□□□□□ -1.76
NIPBL-204ENST00000504430 DCAKDQ8WVC6 231 aa4.05□□□□□ -1.76
NIPBL-204ENST00000504430 SKA2Q8WVK7 121 aaPredicted RBP4.05□□□□□ -1.76
NIPBL-204ENST00000504430 TRIB3Q96RU7 358 aa4.05□□□□□ -1.76
NIPBL-204ENST00000504430 XCL2Q9UBD3 114 aa4.05□□□□□ -1.76
NIPBL-204ENST00000504430 CYSLTR1Q9Y271 337 aa4.05□□□□□ -1.76
NIPBL-204ENST00000504430 DOCK5Q9H7D0 1870 aa4.05□□□□□ -1.76
NIPBL-204ENST00000504430 ADAMTSL1Q8N6G6 1762 aa4.05□□□□□ -1.76
NIPBL-204ENST00000504430 XIRP1Q702N8 1843 aaKnown RBP4.04□□□□□ -1.76
NIPBL-204ENST00000504430 TP53I11O14683 189 aa4.04□□□□□ -1.76
NIPBL-204ENST00000504430 SIX1Q15475 284 aaPredicted RBP4.04□□□□□ -1.76
NIPBL-204ENST00000504430 CNPY1Q3B7I2 92 aa4.04□□□□□ -1.76
NIPBL-204ENST00000504430 OCIAD2Q56VL3 154 aa4.04□□□□□ -1.76
NIPBL-204ENST00000504430 RNASE10Q5GAN6 216 aaKnown RBP4.04□□□□□ -1.76
NIPBL-204ENST00000504430 ZNF613Q6PF04 617 aa4.04□□□□□ -1.76
NIPBL-204ENST00000504430 FBXW12Q6X9E4 464 aa4.04□□□□□ -1.76
NIPBL-204ENST00000504430 GGNQ86UU5 652 aa4.04□□□□□ -1.76
NIPBL-204ENST00000504430 C4orf33Q8N1A6 199 aa4.04□□□□□ -1.76
NIPBL-204ENST00000504430 LYG1Q8N1E2 194 aa4.04□□□□□ -1.76
NIPBL-204ENST00000504430 FAM71E2Q8N5Q1 922 aa4.04□□□□□ -1.76
NIPBL-204ENST00000504430 LY6G5BQ8NDX9 201 aa4.04□□□□□ -1.76
NIPBL-204ENST00000504430 ZNRF4Q8WWF5 429 aa4.04□□□□□ -1.76
NIPBL-204ENST00000504430 TP53RKQ96S44 253 aa4.04□□□□□ -1.76
NIPBL-204ENST00000504430 LYSMD1Q96S90 227 aa4.04□□□□□ -1.76
NIPBL-204ENST00000504430 SRMSQ9H3Y6 488 aa4.04□□□□□ -1.76
NIPBL-204ENST00000504430 PRSS21Q9Y6M0 314 aa4.04□□□□□ -1.76
NIPBL-204ENST00000504430 KIF13BQ9NQT8 1826 aa4.04□□□□□ -1.76
NIPBL-204ENST00000504430 IGHMP01871 453 aa4.04□□□□□ -1.76
NIPBL-204ENST00000504430 BLVRBP30043 206 aaPredicted RBP4.04□□□□□ -1.76
NIPBL-204ENST00000504430 RAB5CP51148 216 aa4.04□□□□□ -1.76
NIPBL-204ENST00000504430 PRR3P79522 188 aaKnown RBP4.04□□□□□ -1.76
NIPBL-204ENST00000504430 TMEM267Q0VDI3 215 aaPredicted RBP4.04□□□□□ -1.76
NIPBL-204ENST00000504430 N4BP2L1Q5TBK1 243 aaPredicted RBP4.04□□□□□ -1.76
NIPBL-204ENST00000504430 UNQ9165/PRO28630Q6UXU0 137 aa4.04□□□□□ -1.76
NIPBL-204ENST00000504430 ACP7Q6ZNF0 438 aa4.04□□□□□ -1.76
NIPBL-204ENST00000504430 CLCF1Q9UBD9 225 aa4.04□□□□□ -1.76
NIPBL-204ENST00000504430 ROBO3Q96MS0 1386 aa4.04□□□□□ -1.76
NIPBL-204ENST00000504430 MRC2Q9UBG0 1479 aa4.04□□□□□ -1.76
NIPBL-204ENST00000504430 IGHV3OR16-12A0A075B7B8 117 aa4.04□□□□□ -1.76
NIPBL-204ENST00000504430 A0A0J9YXV3 536 aa4.04□□□□□ -1.76
NIPBL-204ENST00000504430 SCO1O75880 301 aa4.04□□□□□ -1.76
NIPBL-204ENST00000504430 AGTR1P30556 359 aa4.04□□□□□ -1.76
NIPBL-204ENST00000504430 LAMTOR4Q0VGL1 99 aa4.04□□□□□ -1.76
NIPBL-204ENST00000504430 BTN1A1Q13410 526 aa4.04□□□□□ -1.76
NIPBL-204ENST00000504430 C6orf99Q4VX62 202 aa4.04□□□□□ -1.76
NIPBL-204ENST00000504430 TNFAIP8L3Q5GJ75 292 aa4.04□□□□□ -1.76
NIPBL-204ENST00000504430 LCNL1Q6ZST4 164 aa4.04□□□□□ -1.76
NIPBL-204ENST00000504430 RFLNAQ6ZTI6 216 aa4.04□□□□□ -1.76
NIPBL-204ENST00000504430 C1orf158Q8N1D5 194 aa4.04□□□□□ -1.76
NIPBL-204ENST00000504430 OR13C4Q8NGS5 318 aa4.04□□□□□ -1.76
NIPBL-204ENST00000504430 MBD3L1Q8WWY6 194 aa4.04□□□□□ -1.76
NIPBL-204ENST00000504430 OR4K3Q96R72 315 aa4.04□□□□□ -1.76
NIPBL-204ENST00000504430 FAM96AQ9H5X1 160 aa4.04□□□□□ -1.76
NIPBL-204ENST00000504430 PYGO1Q9Y3Y4 419 aa4.04□□□□□ -1.76
NIPBL-204ENST00000504430 CITO14578 2027 aa4.03□□□□□ -1.76
NIPBL-204ENST00000504430 NOTCH4Q99466 2003 aa4.03□□□□□ -1.76
NIPBL-204ENST00000504430 IGKV1-27A0A075B6S5 117 aa4.03□□□□□ -1.76
NIPBL-204ENST00000504430 A0A096LPI6 279 aa4.03□□□□□ -1.76
NIPBL-204ENST00000504430 A0A0G2JN53 185 aa4.03□□□□□ -1.76
NIPBL-204ENST00000504430 C4orf51C9J302 202 aa4.03□□□□□ -1.76
NIPBL-204ENST00000504430 MMP7P09237 267 aaPredicted RBP4.03□□□□□ -1.76
NIPBL-204ENST00000504430 CERS1P27544 350 aa4.03□□□□□ -1.76
NIPBL-204ENST00000504430 EIF2B2P49770 351 aaKnown RBP4.03□□□□□ -1.76
NIPBL-204ENST00000504430 HERPUD1Q15011 391 aa4.03□□□□□ -1.76
NIPBL-204ENST00000504430 IBA57Q5T440 356 aaKnown RBP4.03□□□□□ -1.76
NIPBL-204ENST00000504430 OGFOD2Q6N063 350 aa4.03□□□□□ -1.76
NIPBL-204ENST00000504430 CLEC19AQ6UXS0 136 aa4.03□□□□□ -1.76
NIPBL-204ENST00000504430 LRRTM1Q86UE6 522 aa4.03□□□□□ -1.76
NIPBL-204ENST00000504430 CDC20BQ86Y33 519 aa4.03□□□□□ -1.76
NIPBL-204ENST00000504430 TMEM61Q8N0U2 210 aa4.03□□□□□ -1.76
NIPBL-204ENST00000504430 OR5AP2Q8NGF4 316 aa4.03□□□□□ -1.76
NIPBL-204ENST00000504430 PRSS27Q9BQR3 290 aa4.03□□□□□ -1.76
NIPBL-204ENST00000504430 ZNF649Q9BS31 505 aa4.03□□□□□ -1.76
NIPBL-204ENST00000504430 GABARAPL3Q9BY60 117 aa4.03□□□□□ -1.76
NIPBL-204ENST00000504430 ACER3Q9NUN7 267 aa4.03□□□□□ -1.76
NIPBL-204ENST00000504430 CALML5Q9NZT1 146 aa4.03□□□□□ -1.76
NIPBL-204ENST00000504430 SSR3Q9UNL2 185 aa4.03□□□□□ -1.76
NIPBL-204ENST00000504430 TSPOAP1O95153 1857 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms