RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 SCGB1D4Q6XE38 83 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 OLIG3Q7RTU3 272 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 SMIM15Q7Z3B0 74 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 ITPRIPQ8IWB1 547 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 SAXO1Q8IYX7 474 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 LINC00337Q8N6G1 96 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 TMEM161BQ8NDZ6 487 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 OR4M1Q8NGD0 313 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 OR2D3Q8NGH3 330 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 OR11L1Q8NGX0 322 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 OR1L1Q8NH94 360 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 JOSD2Q8TAC2 188 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 Q8WTZ3 238 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 FAM172AQ8WUF8 416 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 EEF1AKMT1Q8WVE0 214 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 TWIST2Q8WVJ9 160 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 TNFAIP8L1Q8WVP5 186 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 ASB17Q8WXJ9 295 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 TMBIM1Q969X1 311 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 CLDN23Q96B33 292 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 TAMM41Q96BW9 452 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 NEURL3Q96EH8 262 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 BTF3L4Q96K17 158 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 YPEL4Q96NS1 127 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 RNF157Q96PX1 679 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 NIPSNAP1Q9BPW8 284 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 PRSS27Q9BQR3 290 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 ANAPC13Q9BS18 74 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 RTBDNQ9BSG5 229 aaPredicted RBP1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 CHAC1Q9BUX1 264 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 ZNF717Q9BY31 904 aaPredicted RBP1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 TBL1XR1Q9BZK7 514 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 ZSCAN16Q9H4T2 348 aaPredicted RBP1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 ASB7Q9H672 318 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 NOX3Q9HBY0 568 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 HES4Q9HCC6 221 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 LHX9Q9NQ69 397 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 XPNPEP1Q9NQW7 623 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 PARP11Q9NR21 331 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 GID8Q9NWU2 228 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 GLTPQ9NZD2 209 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 TMEM216Q9P0N5 145 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 OR12D3Q9UGF7 316 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 ADAMTSL3P82987 1691 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 MYO10Q9HD67 2058 aa1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 ROCK1Q13464 1354 aa1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 ANKRD30AQ9BXX3 1397 aa1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 ZBED9Q6R2W3 1325 aa1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 ZNFX1Q9P2E3 1918 aaKnown RBP1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 IGKV2D-24A0A075B6R9 120 aa1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 TGIF2-C20orf24A0A0A6YYL0 155 aa1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 IGHV2-26A0A0B4J1V2 119 aa1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 CCL15-CCL14A0A0B4J2E2 113 aa1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 TMEM72A0PK05 275 aa1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 ARGFXA6NJG6 315 aa1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 EVPLLA8MZ36 301 aa1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 C8orf87E5RJ46 101 aa1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 M0QYV0 167 aa1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 FFAR1O14842 300 aa1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 TCF21O43680 179 aa1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 PLIN3O60664 434 aa1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 EIF1BO60739 113 aaKnown RBP1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 NOS1APO75052 506 aaPredicted RBP1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 MED6O75586 246 aa1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 HAND1O96004 215 aa1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 HBZP02008 142 aa1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 CD5P06127 495 aa1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 OR4A8P0C604 315 aa1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 SCGB1C2P0DMR2 95 aa1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 IGHV1-8P0DP01 117 aa1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 ZNF823P16415 610 aa1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 M6PRP20645 277 aa1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 IL3RAP26951 378 aa1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 TGFBR2P37173 567 aa1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 EIF1P41567 113 aaKnown RBP1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 MP68P56378 58 aa1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 SPCS3P61009 180 aa1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 NAA20P61599 178 aa1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 HIST1H3AP68431 136 aa1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 HPCAP84074 193 aa1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 RPL19P84098 196 aaKnown RBP1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 H3F3AP84243 136 aa1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 EMX1Q04741 257 aaPredicted RBP1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 SKP2Q13309 424 aa1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 IHHQ14623 411 aa1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 RSU1Q15404 277 aa1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 ALX1Q15699 326 aa1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 SSX1Q16384 188 aa1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 MOGQ16653 247 aa1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 CCL15Q16663 113 aa1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 MPV17L2Q567V2 206 aa1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 TMEM97Q5BJF2 176 aa1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 CENPWQ5EE01 88 aa1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 ZNF684Q5T5D7 378 aa1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 NXNL2Q5VZ03 156 aa1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 TRIQKQ629K1 86 aa1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 TMEM42Q69YG0 159 aa1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 OR10K2Q6IF99 312 aa1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 DHRS4L2Q6PKH6 230 aa1.49□□□□□ -2.17
HMGB1P35-201ENST00000503360 HIST2H3AQ71DI3 136 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms