RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 RWDD2AQ9UIY3 292 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 VPREB3Q9UKI3 123 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 OR52A1Q9UKL2 312 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 ANGPT4Q9Y264 503 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 ZNF257Q9Y2Q1 563 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 SIGLEC9Q9Y336 463 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 MYH2Q9UKX2 1941 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 A0A0G2JRQ6 117 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 TEX50A0A1B0GTY4 177 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 OTOL1A6NHN0 477 aaPredicted RBP2.28□□□□□ -2.04
HMGN4-202ENST00000477243 J3QT63 122 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 K7EQG2 157 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 UPK2O00526 184 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 CRLF1O75462 422 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 RP2O75695 350 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 OR7C1O76099 320 aaPredicted RBP2.28□□□□□ -2.04
HMGN4-202ENST00000477243 S1PR2O95136 353 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 MOSP00540 346 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 ALPLP05186 524 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 RBMY1A1P0DJD3 496 aaKnown RBP2.28□□□□□ -2.04
HMGN4-202ENST00000477243 SULT1A3P0DMM9 295 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 SULT1A4P0DMN0 295 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 C1GALT1C1LP0DN25 315 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 OR13C7P0DN81 318 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 ERGP11308 486 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 CYBAP13498 195 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 NELFEP18615 380 aaKnown RBP2.28□□□□□ -2.04
HMGN4-202ENST00000477243 VDAC1P21796 283 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 IGHV1-2P23083 117 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 S100GP29377 79 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 FMO3P31513 532 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 PSMB2P49721 201 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 RND2P52198 227 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 TAS2R41P59536 307 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 TAS2R43P59537 309 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 PFN3P60673 137 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 CDC42P60953 191 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 RAB2AP61019 212 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 HBG1P69891 147 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 HBG2P69892 147 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 SLC35A2P78381 396 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 SLC7A9P82251 487 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 APOFQ13790 326 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 ZNF266Q14584 549 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 ZNF146Q15072 292 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 EBPQ15125 230 aaKnown RBP2.28□□□□□ -2.04
HMGN4-202ENST00000477243 LRRC36Q1X8D7 754 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 CEACAM16Q2WEN9 425 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 TFDP3Q5H9I0 405 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 CLEC12AQ5QGZ9 265 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 FAM162BQ5T6X4 162 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 SLC35E4Q6ICL7 350 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 ZNF774Q6NX45 483 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 TEX43Q6ZNM6 134 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 FAM220AQ7Z4H9 259 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 DEFB128Q7Z7B8 93 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 C17orf82Q86X59 251 aaPredicted RBP2.28□□□□□ -2.04
HMGN4-202ENST00000477243 CATSPER3Q86XQ3 398 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 UBL4BQ8N7F7 174 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 ZNF676Q8N7Q3 588 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 OR51S1Q8NGJ8 323 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 OR1L8Q8NGR8 309 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 OR10J6PQ8NGY7 276 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 OR13G1Q8NGZ3 307 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 OR13C6PQ8NH95 151 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 ZNF420Q8TAQ5 688 aaPredicted RBP2.28□□□□□ -2.04
HMGN4-202ENST00000477243 TNFAIP8L1Q8WVP5 186 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 RGP1Q92546 391 aaPredicted RBP2.28□□□□□ -2.04
HMGN4-202ENST00000477243 YIPF5Q969M3 257 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 TMBIM1Q969X1 311 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 MARC2Q969Z3 335 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 BORCS7Q96B45 105 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 SEH1LQ96EE3 360 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 CNRIP1Q96F85 164 aaPredicted RBP2.28□□□□□ -2.04
HMGN4-202ENST00000477243 GALNT14Q96FL9 552 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 CPNE2Q96FN4 548 aaPredicted RBP2.28□□□□□ -2.04
HMGN4-202ENST00000477243 ZNF597Q96LX8 424 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 BIRC8Q96P09 236 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 OR52E6Q96RD3 313 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 METTL26Q96S19 204 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 EMC6Q9BV81 110 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 CLEC7AQ9BXN2 247 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 DCSTAMPQ9H295 470 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 MIXL1Q9H2W2 232 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 OR51I2Q9H344 312 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 VSIRQ9H7M9 311 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 FAM49BQ9NUQ9 324 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 DMAC2Q9NW81 257 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 ZNF446Q9NWS9 450 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 ZNF629Q9UEG4 869 aaPredicted RBP2.28□□□□□ -2.04
HMGN4-202ENST00000477243 ENOPH1Q9UHY7 261 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 VAX2Q9UIW0 290 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 C14orf166Q9Y224 244 aaKnown RBP2.28□□□□□ -2.04
HMGN4-202ENST00000477243 FAM32AQ9Y421 112 aaKnown RBP2.28□□□□□ -2.04
HMGN4-202ENST00000477243 ORC6Q9Y5N6 252 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 LRRK1Q38SD2 2015 aa2.28□□□□□ -2.04
HMGN4-202ENST00000477243 COL5A1P20908 1838 aaPredicted RBP2.28□□□□□ -2.04
HMGN4-202ENST00000477243 MACF1Q9UPN3 7388 aaKnown RBP2.28□□□□□ -2.05
HMGN4-202ENST00000477243 MYO7AQ13402 2215 aa2.27□□□□□ -2.05
HMGN4-202ENST00000477243 MED13Q9UHV7 2174 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms