RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 ACY3Q96HD9 319 aa11.2□□□□□ -0.62
CCNL1-216ENST00000475298 ULBP2Q9BZM5 246 aa11.2□□□□□ -0.62
CCNL1-216ENST00000475298 OR10A2Q9H208 303 aa11.2□□□□□ -0.62
CCNL1-216ENST00000475298 DNAJC4Q9NNZ3 241 aa11.2□□□□□ -0.62
CCNL1-216ENST00000475298 FKBP11Q9NYL4 201 aa11.2□□□□□ -0.62
CCNL1-216ENST00000475298 M0R135 149 aa11.19□□□□□ -0.62
CCNL1-216ENST00000475298 HPRT1P00492 218 aa11.19□□□□□ -0.62
CCNL1-216ENST00000475298 CYC1P08574 325 aa11.19□□□□□ -0.62
CCNL1-216ENST00000475298 PATE4P0C8F1 98 aa11.19□□□□□ -0.62
CCNL1-216ENST00000475298 MMP9P14780 707 aa11.19□□□□□ -0.62
CCNL1-216ENST00000475298 CTSSP25774 331 aa11.19□□□□□ -0.62
CCNL1-216ENST00000475298 FKBP2P26885 142 aaKnown RBP11.19□□□□□ -0.62
CCNL1-216ENST00000475298 CCKARP32238 428 aa11.19□□□□□ -0.62
CCNL1-216ENST00000475298 MLF1P58340 268 aa11.19□□□□□ -0.62
CCNL1-216ENST00000475298 TLE4Q04727 773 aa11.19□□□□□ -0.62
CCNL1-216ENST00000475298 WDR25Q64LD2 544 aaPredicted RBP11.19□□□□□ -0.62
CCNL1-216ENST00000475298 WDR5BQ86VZ2 330 aa11.19□□□□□ -0.62
CCNL1-216ENST00000475298 OR10G4Q8NGN3 311 aa11.19□□□□□ -0.62
CCNL1-216ENST00000475298 ZNF799Q96GE5 643 aa11.19□□□□□ -0.62
CCNL1-216ENST00000475298 GAL3ST2Q9H3Q3 398 aa11.19□□□□□ -0.62
CCNL1-216ENST00000475298 CALHM2Q9HA72 323 aa11.19□□□□□ -0.62
CCNL1-216ENST00000475298 GAB2Q9UQC2 676 aa11.19□□□□□ -0.62
CCNL1-216ENST00000475298 C14orf166Q9Y224 244 aaKnown RBP11.19□□□□□ -0.62
CCNL1-216ENST00000475298 CCDC163A0A0D9SF12 145 aa11.19□□□□□ -0.62
CCNL1-216ENST00000475298 CRYM-AS1A6NIL9 109 aa11.19□□□□□ -0.62
CCNL1-216ENST00000475298 B4E171 279 aa11.19□□□□□ -0.62
CCNL1-216ENST00000475298 TRDCB7Z8K6 153 aa11.19□□□□□ -0.62
CCNL1-216ENST00000475298 HSPA12AO43301 675 aa11.19□□□□□ -0.62
CCNL1-216ENST00000475298 DHRS3O75911 302 aa11.19□□□□□ -0.62
CCNL1-216ENST00000475298 SCGB1D1O95968 90 aa11.19□□□□□ -0.62
CCNL1-216ENST00000475298 LCATP04180 440 aa11.19□□□□□ -0.62
CCNL1-216ENST00000475298 HPNP05981 417 aa11.19□□□□□ -0.62
CCNL1-216ENST00000475298 PFN1P07737 140 aaKnown RBP11.19□□□□□ -0.62
CCNL1-216ENST00000475298 RFPL3SP0C7P2 107 aa11.19□□□□□ -0.62
CCNL1-216ENST00000475298 GZMHP20718 246 aa11.19□□□□□ -0.62
CCNL1-216ENST00000475298 BLVRBP30043 206 aaPredicted RBP11.19□□□□□ -0.62
CCNL1-216ENST00000475298 OTX2P32243 289 aa11.19□□□□□ -0.62
CCNL1-216ENST00000475298 FOLR3P41439 243 aa11.19□□□□□ -0.62
CCNL1-216ENST00000475298 ALDH3B1P43353 468 aa11.19□□□□□ -0.62
CCNL1-216ENST00000475298 RPL23AP62750 156 aaKnown RBP11.19□□□□□ -0.62
CCNL1-216ENST00000475298 GNB2P62879 340 aa11.19□□□□□ -0.62
CCNL1-216ENST00000475298 PNRC1Q12796 327 aaPredicted RBP11.19□□□□□ -0.62
CCNL1-216ENST00000475298 PRSS8Q16651 343 aa11.19□□□□□ -0.62
CCNL1-216ENST00000475298 ZNF66Q6ZN08 573 aa11.19□□□□□ -0.62
CCNL1-216ENST00000475298 LRP11Q86VZ4 500 aa11.19□□□□□ -0.62
CCNL1-216ENST00000475298 COL25A1Q9BXS0 654 aaPredicted RBP11.19□□□□□ -0.62
CCNL1-216ENST00000475298 LOC102723971A0A1B0GUV8 181 aa11.18□□□□□ -0.62
CCNL1-216ENST00000475298 LNP1A1A4G5 178 aa11.18□□□□□ -0.62
CCNL1-216ENST00000475298 TFPI2P48307 235 aa11.18□□□□□ -0.62
CCNL1-216ENST00000475298 SNU13P55769 128 aaKnown RBP11.18□□□□□ -0.62
CCNL1-216ENST00000475298 CSNK2A1P68400 391 aaPredicted RBP11.18□□□□□ -0.62
CCNL1-216ENST00000475298 Q0VFX4 171 aa11.18□□□□□ -0.62
CCNL1-216ENST00000475298 P4HA3Q7Z4N8 544 aa11.18□□□□□ -0.62
CCNL1-216ENST00000475298 UBALD2Q8IYN6 164 aa11.18□□□□□ -0.62
CCNL1-216ENST00000475298 FBXL14Q8N1E6 418 aa11.18□□□□□ -0.62
CCNL1-216ENST00000475298 CSNK2A3Q8NEV1 391 aa11.18□□□□□ -0.62
CCNL1-216ENST00000475298 OR52M1Q8NGK5 317 aa11.18□□□□□ -0.62
CCNL1-216ENST00000475298 REEP6Q96HR9 211 aa11.18□□□□□ -0.62
CCNL1-216ENST00000475298 WFIKKN1Q96NZ8 548 aa11.18□□□□□ -0.62
CCNL1-216ENST00000475298 ZPBPQ9BS86 351 aa11.18□□□□□ -0.62
CCNL1-216ENST00000475298 OR2J1Q9GZK6 312 aa11.18□□□□□ -0.62
CCNL1-216ENST00000475298 SDF2L1Q9HCN8 221 aa11.18□□□□□ -0.62
CCNL1-216ENST00000475298 P4HTMQ9NXG6 502 aa11.18□□□□□ -0.62
CCNL1-216ENST00000475298 ZNF581Q9P0T4 197 aa11.18□□□□□ -0.62
CCNL1-216ENST00000475298 ZFP30Q9Y2G7 519 aa11.18□□□□□ -0.62
CCNL1-216ENST00000475298 PPP5D1E7EU14 171 aa11.18□□□□□ -0.62
CCNL1-216ENST00000475298 WNT5AP41221 380 aa11.18□□□□□ -0.62
CCNL1-216ENST00000475298 CDKN1BP46527 198 aa11.18□□□□□ -0.62
CCNL1-216ENST00000475298 TNFSF10P50591 281 aa11.18□□□□□ -0.62
CCNL1-216ENST00000475298 B3GALT5-AS1P59052 145 aa11.18□□□□□ -0.62
CCNL1-216ENST00000475298 EWSR1Q01844 656 aaKnown RBP eCLIP11.18□□□□□ -0.62
CCNL1-216ENST00000475298 FOXL2NBQ6ZUU3 175 aa11.18□□□□□ -0.62
CCNL1-216ENST00000475298 TMEM170AQ8WVE7 144 aa11.18□□□□□ -0.62
CCNL1-216ENST00000475298 ALKBH3Q96Q83 286 aaPredicted RBP11.18□□□□□ -0.62
CCNL1-216ENST00000475298 HDHD3Q9BSH5 251 aaPredicted RBP11.18□□□□□ -0.62
CCNL1-216ENST00000475298 NAGKQ9UJ70 344 aa11.18□□□□□ -0.62
CCNL1-216ENST00000475298 IGKV1D-8A0A087WSZ0 117 aa11.17□□□□□ -0.62
CCNL1-216ENST00000475298 A0A0U1RQV5 110 aa11.17□□□□□ -0.62
CCNL1-216ENST00000475298 FOXI3A8MTJ6 420 aaPredicted RBP11.17□□□□□ -0.62
CCNL1-216ENST00000475298 CBR3O75828 277 aa11.17□□□□□ -0.62
CCNL1-216ENST00000475298 VAMP5O95183 116 aa11.17□□□□□ -0.62
CCNL1-216ENST00000475298 OTX1P32242 354 aaPredicted RBP11.17□□□□□ -0.62
CCNL1-216ENST00000475298 ZNF133P52736 654 aaPredicted RBP11.17□□□□□ -0.62
CCNL1-216ENST00000475298 RAB11AP62491 216 aa11.17□□□□□ -0.62
CCNL1-216ENST00000475298 HIST1H3AP68431 136 aa11.17□□□□□ -0.62
CCNL1-216ENST00000475298 IL13RA2Q14627 380 aa11.17□□□□□ -0.62
CCNL1-216ENST00000475298 SP6Q3SY56 376 aa11.17□□□□□ -0.62
CCNL1-216ENST00000475298 C6orf201Q7Z4U5 140 aa11.17□□□□□ -0.62
CCNL1-216ENST00000475298 LYZL2Q7Z4W2 148 aa11.17□□□□□ -0.62
CCNL1-216ENST00000475298 GBGT1Q8N5D6 347 aa11.17□□□□□ -0.62
CCNL1-216ENST00000475298 FAM89BQ8N5H3 189 aa11.17□□□□□ -0.62
CCNL1-216ENST00000475298 OR14L1PQ8NHC6 308 aa11.17□□□□□ -0.62
CCNL1-216ENST00000475298 BOD1Q96IK1 185 aa11.17□□□□□ -0.62
CCNL1-216ENST00000475298 PECRQ9BY49 303 aa11.17□□□□□ -0.62
CCNL1-216ENST00000475298 FAM230AA0A1W2PPH8 454 aa11.17□□□□□ -0.62
CCNL1-216ENST00000475298 LAMTOR5O43504 91 aa11.17□□□□□ -0.62
CCNL1-216ENST00000475298 ANGPTL7O43827 346 aa11.17□□□□□ -0.62
CCNL1-216ENST00000475298 B4GALT1P15291 398 aa11.17□□□□□ -0.62
CCNL1-216ENST00000475298 TAS2R46P59540 309 aa11.17□□□□□ -0.62
CCNL1-216ENST00000475298 SULF2Q8IWU5 870 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms