RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 TRUB1Q8WWH5 349 aaKnown RBP13.49□□□□□ -0.25
HMGN1-209ENST00000463631 RTN4IP1Q8WWV3 396 aaPredicted RBP13.49□□□□□ -0.25
HMGN1-209ENST00000463631 SLC7A6OSQ96CW6 309 aaPredicted RBP13.49□□□□□ -0.25
HMGN1-209ENST00000463631 RCHY1Q96PM5 261 aa13.49□□□□□ -0.25
HMGN1-209ENST00000463631 NR1H4Q96RI1 486 aaPredicted RBP13.49□□□□□ -0.25
HMGN1-209ENST00000463631 S1PR3Q99500 378 aa13.49□□□□□ -0.25
HMGN1-209ENST00000463631 RIBC2Q9H4K1 309 aa13.49□□□□□ -0.25
HMGN1-209ENST00000463631 TXNL1O43396 289 aa13.48□□□□□ -0.25
HMGN1-209ENST00000463631 MOSP00540 346 aa13.48□□□□□ -0.25
HMGN1-209ENST00000463631 OR5H8P0DN80 308 aa13.48□□□□□ -0.25
HMGN1-209ENST00000463631 GZMHP20718 246 aa13.48□□□□□ -0.25
HMGN1-209ENST00000463631 VDAC1P21796 283 aa13.48□□□□□ -0.25
HMGN1-209ENST00000463631 RUNX1Q01196 453 aa13.48□□□□□ -0.25
HMGN1-209ENST00000463631 PIGYQ3MUY2 71 aa13.48□□□□□ -0.25
HMGN1-209ENST00000463631 NHLRC3Q5JS37 347 aa13.48□□□□□ -0.25
HMGN1-209ENST00000463631 ZNF529Q6P280 563 aa13.48□□□□□ -0.25
HMGN1-209ENST00000463631 ASCL4Q6XD76 172 aa13.48□□□□□ -0.25
HMGN1-209ENST00000463631 ACBD7Q8N6N7 88 aa13.48□□□□□ -0.25
HMGN1-209ENST00000463631 RNFT2Q96EX2 444 aa13.48□□□□□ -0.25
HMGN1-209ENST00000463631 C4orf36Q96KX1 117 aa13.48□□□□□ -0.25
HMGN1-209ENST00000463631 HSPB9Q9BQS6 159 aa13.48□□□□□ -0.25
HMGN1-209ENST00000463631 CHCHD6Q9BRQ6 235 aa13.48□□□□□ -0.25
HMGN1-209ENST00000463631 DPCDQ9BVM2 203 aaPredicted RBP13.48□□□□□ -0.25
HMGN1-209ENST00000463631 FAM118AQ9NWS6 357 aa13.48□□□□□ -0.25
HMGN1-209ENST00000463631 TMEM212A6NML5 194 aa13.47□□□□□ -0.25
HMGN1-209ENST00000463631 C15orf65H3BRN8 121 aa13.47□□□□□ -0.25
HMGN1-209ENST00000463631 GABRPO00591 440 aa13.47□□□□□ -0.25
HMGN1-209ENST00000463631 OR8U8P0C7N1 319 aa13.47□□□□□ -0.25
HMGN1-209ENST00000463631 IL3RAP26951 378 aa13.47□□□□□ -0.25
HMGN1-209ENST00000463631 SOX6P35712 828 aa13.47□□□□□ -0.25
HMGN1-209ENST00000463631 ZNF137PP52743 207 aa13.47□□□□□ -0.25
HMGN1-209ENST00000463631 SYS1Q8N2H4 156 aa13.47□□□□□ -0.25
HMGN1-209ENST00000463631 SUMF2Q8NBJ7 301 aa13.47□□□□□ -0.25
HMGN1-209ENST00000463631 OR11H1Q8NG94 326 aa13.47□□□□□ -0.25
HMGN1-209ENST00000463631 TNFAIP8L1Q8WVP5 186 aa13.47□□□□□ -0.25
HMGN1-209ENST00000463631 UBE2E2Q96LR5 201 aa13.47□□□□□ -0.25
HMGN1-209ENST00000463631 RASL11BQ9BPW5 248 aa13.47□□□□□ -0.25
HMGN1-209ENST00000463631 IMPAD1Q9NX62 359 aa13.47□□□□□ -0.25
HMGN1-209ENST00000463631 DNAH1Q9P2D7 4330 aa13.47□□□□□ -0.25
HMGN1-209ENST00000463631 TRAV39A0A0B4J263 110 aa13.46□□□□□ -0.25
HMGN1-209ENST00000463631 TMEM30CPA0ZSE6 113 aa13.46□□□□□ -0.25
HMGN1-209ENST00000463631 J3QLW9 94 aa13.46□□□□□ -0.25
HMGN1-209ENST00000463631 FCGR1AP12314 374 aa13.46□□□□□ -0.25
HMGN1-209ENST00000463631 ZNF19P17023 458 aa13.46□□□□□ -0.25
HMGN1-209ENST00000463631 RSU1Q15404 277 aa13.46□□□□□ -0.25
HMGN1-209ENST00000463631 ASPHD1Q5U4P2 390 aa13.46□□□□□ -0.25
HMGN1-209ENST00000463631 MEDAGQ5VYS4 303 aa13.46□□□□□ -0.25
HMGN1-209ENST00000463631 LPCAT4Q643R3 524 aa13.46□□□□□ -0.25
HMGN1-209ENST00000463631 SBSPONQ8IVN8 264 aa13.46□□□□□ -0.25
HMGN1-209ENST00000463631 MRPL48Q96GC5 212 aaKnown RBP13.46□□□□□ -0.25
HMGN1-209ENST00000463631 KCTD7Q96MP8 289 aa13.46□□□□□ -0.25
HMGN1-209ENST00000463631 GFOD1Q9NXC2 390 aa13.46□□□□□ -0.25
HMGN1-209ENST00000463631 IL36GQ9NZH8 169 aa13.46□□□□□ -0.25
HMGN1-209ENST00000463631 AP4S1Q9Y587 144 aa13.46□□□□□ -0.25
HMGN1-209ENST00000463631 CSMD3Q7Z407 3707 aa13.46□□□□□ -0.26
HMGN1-209ENST00000463631 LCE6AA0A183 80 aa13.45□□□□□ -0.26
HMGN1-209ENST00000463631 I3L521 148 aa13.45□□□□□ -0.26
HMGN1-209ENST00000463631 SDCBPO00560 298 aaPredicted RBP13.45□□□□□ -0.26
HMGN1-209ENST00000463631 ORC5O43913 435 aa13.45□□□□□ -0.26
HMGN1-209ENST00000463631 RAB3AP20336 220 aa13.45□□□□□ -0.26
HMGN1-209ENST00000463631 RBM11P57052 281 aaKnown RBP13.45□□□□□ -0.26
HMGN1-209ENST00000463631 SNRPGP62308 76 aaKnown RBP13.45□□□□□ -0.26
HMGN1-209ENST00000463631 MRPL28Q13084 256 aaKnown RBP13.45□□□□□ -0.26
HMGN1-209ENST00000463631 AMIGO2Q86SJ2 522 aa13.45□□□□□ -0.26
HMGN1-209ENST00000463631 LINC00596Q86U02 117 aa13.45□□□□□ -0.26
HMGN1-209ENST00000463631 ZNF429Q86V71 674 aa13.45□□□□□ -0.26
HMGN1-209ENST00000463631 OR10K1Q8NGX5 313 aa13.45□□□□□ -0.26
HMGN1-209ENST00000463631 ARL11Q969Q4 196 aa13.45□□□□□ -0.26
HMGN1-209ENST00000463631 MYCBPQ99417 103 aaPredicted RBP13.45□□□□□ -0.26
HMGN1-209ENST00000463631 LYSTQ99698 3801 aa13.45□□□□□ -0.26
HMGN1-209ENST00000463631 CHCHD3Q9NX63 227 aaKnown RBP13.45□□□□□ -0.26
HMGN1-209ENST00000463631 ZNF581Q9P0T4 197 aa13.45□□□□□ -0.26
HMGN1-209ENST00000463631 OAZ3Q9UMX2 235 aa13.45□□□□□ -0.26
HMGN1-209ENST00000463631 DHDHQ9UQ10 334 aa13.45□□□□□ -0.26
HMGN1-209ENST00000463631 EXOGQ9Y2C4 368 aaKnown RBP13.45□□□□□ -0.26
HMGN1-209ENST00000463631 EPPK1P58107 5090 aaKnown RBP13.44□□□□□ -0.26
HMGN1-209ENST00000463631 ZNF736B4DX44 427 aaPredicted RBP13.44□□□□□ -0.26
HMGN1-209ENST00000463631 LY86O95711 162 aa13.44□□□□□ -0.26
HMGN1-209ENST00000463631 ZNF616Q08AN1 781 aa13.44□□□□□ -0.26
HMGN1-209ENST00000463631 KIAA0141Q14154 515 aaPredicted RBP13.44□□□□□ -0.26
HMGN1-209ENST00000463631 TMEM30BQ3MIR4 351 aa13.44□□□□□ -0.26
HMGN1-209ENST00000463631 FAM27D1Q5T7N8 215 aa13.44□□□□□ -0.26
HMGN1-209ENST00000463631 SLC25A48Q6ZT89 311 aaKnown RBP13.44□□□□□ -0.26
HMGN1-209ENST00000463631 ZNF439Q8NDP4 499 aa13.44□□□□□ -0.26
HMGN1-209ENST00000463631 OR51A2Q8NGJ7 313 aa13.44□□□□□ -0.26
HMGN1-209ENST00000463631 TSEN15Q8WW01 171 aaKnown RBP13.44□□□□□ -0.26
HMGN1-209ENST00000463631 GPER1Q99527 375 aa13.44□□□□□ -0.26
HMGN1-209ENST00000463631 ALG8Q9BVK2 526 aa13.44□□□□□ -0.26
HMGN1-209ENST00000463631 ST3GAL6Q9Y274 331 aa13.44□□□□□ -0.26
HMGN1-209ENST00000463631 SNTNA6NMZ2 147 aa13.43□□□□□ -0.26
HMGN1-209ENST00000463631 MAGEB3O15480 346 aa13.43□□□□□ -0.26
HMGN1-209ENST00000463631 OR7C1O76099 320 aaPredicted RBP13.43□□□□□ -0.26
HMGN1-209ENST00000463631 IGLV1-40P01703 118 aa13.43□□□□□ -0.26
HMGN1-209ENST00000463631 LYL1P12980 280 aa13.43□□□□□ -0.26
HMGN1-209ENST00000463631 PPIFP30405 207 aaKnown RBP13.43□□□□□ -0.26
HMGN1-209ENST00000463631 VHLP40337 213 aa13.43□□□□□ -0.26
HMGN1-209ENST00000463631 F2RL1P55085 397 aa13.43□□□□□ -0.26
HMGN1-209ENST00000463631 GALEQ14376 348 aa13.43□□□□□ -0.26
HMGN1-209ENST00000463631 ZNF491Q8N8L2 437 aa13.43□□□□□ -0.26
HMGN1-209ENST00000463631 OR1N2Q8NGR9 330 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 173.7 ms