RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 C10orf91Q5T1B1 145 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 AVPI1Q5T686 147 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 MARCH3Q86UD3 253 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 C17orf82Q86X59 251 aaPredicted RBP4.22□□□□□ -1.73
LINC00458-202ENST00000427299 LYPD6Q86Y78 171 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 C15orf54Q8N8G6 183 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 RELL2Q8NC24 303 aaPredicted RBP4.22□□□□□ -1.73
LINC00458-202ENST00000427299 PLPP5Q8NEB5 264 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 OR5AP2Q8NGF4 316 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 OR4D6Q8NGJ1 314 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 OR51A2Q8NGJ7 313 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 OR1S2Q8NGQ3 325 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 OR13A1Q8NGR1 328 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 TERB2Q8NHR7 220 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 FNDC9Q8TBE3 224 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 LMX1AQ8TE12 382 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 C2orf50Q96LR7 162 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 TECTBQ96PL2 329 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 ATG101Q9BSB4 218 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 PBDC1Q9BVG4 233 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 C1QTNF6Q9BXI9 259 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 VN1R1Q9GZP7 353 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 TCEAL2Q9H3H9 227 aaPredicted RBP4.22□□□□□ -1.73
LINC00458-202ENST00000427299 TREM1Q9NP99 234 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 PARP11Q9NR21 331 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 CENPMQ9NSP4 180 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 TMEM100Q9NV29 134 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 KLRF1Q9NZS2 232 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 ZNF391Q9UJN7 358 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 HDGFL3Q9Y3E1 203 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 MRPS18BQ9Y676 258 aaKnown RBP4.22□□□□□ -1.73
LINC00458-202ENST00000427299 UNC13CQ8NB66 2214 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 NCOA6Q14686 2063 aaPredicted RBP4.22□□□□□ -1.73
LINC00458-202ENST00000427299 SEC16AO15027 2179 aa4.21□□□□□ -1.73
LINC00458-202ENST00000427299 LAMA2P24043 3122 aaKnown RBP4.21□□□□□ -1.73
LINC00458-202ENST00000427299 IGKV3D-15A0A087WSY6 115 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 A0A087WZY1 265 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 IGLV3-32A0A0A0MS00 114 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 IGHV5-51A0A0C4DH38 117 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 A0A0U1RQV5 110 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 A0A1W2PPI3 338 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 C16orf97H3BN30 126 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 K7EPK0 472 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 LGALS8O00214 317 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 GPR31O00270 319 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 RRP8O43159 456 aaKnown RBP4.21□□□□□ -1.74
LINC00458-202ENST00000427299 MED6O75586 246 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 CRTAPO75718 401 aaPredicted RBP4.21□□□□□ -1.74
LINC00458-202ENST00000427299 DHRS3O75911 302 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 CST4P01036 141 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 IGHV4-39P01824 125 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 S100A9P06702 114 aaKnown RBP4.21□□□□□ -1.74
LINC00458-202ENST00000427299 PGA4P0DJD7 388 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 PGA3P0DJD8 388 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 FOLR2P14207 255 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 ABOP16442 354 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 GNB3P16520 340 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 MSR1P21757 451 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 DTYMKP23919 212 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 PTGER4P35408 488 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 IER3P46695 156 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 OR1D4P47884 311 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 CDX1P47902 265 aaPredicted RBP4.21□□□□□ -1.74
LINC00458-202ENST00000427299 SULT1A2P50226 295 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 CAV2P51636 162 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 BIDP55957 195 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 FBXW4P57775 412 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 S100A10P60903 97 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 LSM6P62312 80 aaKnown RBP4.21□□□□□ -1.74
LINC00458-202ENST00000427299 QRFPP83859 136 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 PMP22Q01453 160 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 ACY1Q03154 408 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 FMODQ06828 376 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 ECH1Q13011 328 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 MFAP5Q13361 173 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 C1orf61Q13536 156 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 RHEBQ15382 184 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 OR8B8Q15620 311 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 ZNF239Q16600 458 aaKnown RBP4.21□□□□□ -1.74
LINC00458-202ENST00000427299 MICBQ29980 383 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 PLPPR5Q32ZL2 321 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 TMEM30BQ3MIR4 351 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 MOGAT2Q3SYC2 334 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 CHRFAM7AQ494W8 412 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 GLIPR1L1Q6UWM5 242 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 BTNL8Q6UX41 500 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 COX15Q7KZN9 410 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 LHFPL1Q86WI0 220 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 SGPP2Q8IWX5 399 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 LINC00518Q8N0U6 118 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 BATF2Q8N1L9 274 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 FAM71E2Q8N5Q1 922 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 ZNF283Q8N7M2 679 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 CCDC71LQ8N9Z2 235 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 OR8G5Q8NG78 346 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 OR4S1Q8NGB4 309 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 OR6X1Q8NH79 312 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 MARCH1Q8TCQ1 289 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 PAQR8Q8TEZ7 354 aa4.21□□□□□ -1.74
LINC00458-202ENST00000427299 SSMEM1Q8WWF3 244 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms