RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 MGAM2Q2M2H8 2515 aa14.43□□□□□ -0.1
PTPRC-206ENST00000413409 F8VVB4 439 aa14.42□□□□□ -0.1
PTPRC-206ENST00000413409 F8VWA3 439 aa14.42□□□□□ -0.1
PTPRC-206ENST00000413409 CCSO14618 274 aa14.42□□□□□ -0.1
PTPRC-206ENST00000413409 MPC2O95563 127 aa14.42□□□□□ -0.1
PTPRC-206ENST00000413409 ACAA1P09110 424 aaPredicted RBP14.42□□□□□ -0.1
PTPRC-206ENST00000413409 KITLGP21583 273 aa14.42□□□□□ -0.1
PTPRC-206ENST00000413409 S100A11P31949 105 aa14.42□□□□□ -0.1
PTPRC-206ENST00000413409 CYCSP99999 105 aaKnown RBP14.42□□□□□ -0.1
PTPRC-206ENST00000413409 FAM27E3Q08E93 113 aa14.42□□□□□ -0.1
PTPRC-206ENST00000413409 CLEC12BQ2HXU8 276 aa14.42□□□□□ -0.1
PTPRC-206ENST00000413409 GSG1LQ6UXU4 331 aa14.42□□□□□ -0.1
PTPRC-206ENST00000413409 FAM58AQ8N1B3 248 aa14.42□□□□□ -0.1
PTPRC-206ENST00000413409 MOB3AQ96BX8 217 aa14.42□□□□□ -0.1
PTPRC-206ENST00000413409 NMES1Q9C002 83 aa14.42□□□□□ -0.1
PTPRC-206ENST00000413409 CHMP1AQ9HD42 196 aaPredicted RBP14.42□□□□□ -0.1
PTPRC-206ENST00000413409 SLC25A15Q9Y619 301 aa14.42□□□□□ -0.1
PTPRC-206ENST00000413409 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.41□□□□□ -0.1
PTPRC-206ENST00000413409 CRYM-AS1A6NIL9 109 aa14.41□□□□□ -0.1
PTPRC-206ENST00000413409 A8MXE2 369 aa14.41□□□□□ -0.1
PTPRC-206ENST00000413409 ARPC5O15511 151 aa14.41□□□□□ -0.1
PTPRC-206ENST00000413409 ERVS71-1P61550 626 aa14.41□□□□□ -0.1
PTPRC-206ENST00000413409 PSG7Q13046 419 aa14.41□□□□□ -0.1
PTPRC-206ENST00000413409 BAMBIQ13145 260 aa14.41□□□□□ -0.1
PTPRC-206ENST00000413409 ZNF345Q14585 488 aa14.41□□□□□ -0.1
PTPRC-206ENST00000413409 Q6ZPA2 131 aa14.41□□□□□ -0.1
PTPRC-206ENST00000413409 TMUB2Q71RG4 321 aa14.41□□□□□ -0.1
PTPRC-206ENST00000413409 KLF14Q8TD94 323 aaPredicted RBP14.41□□□□□ -0.1
PTPRC-206ENST00000413409 DPCDQ9BVM2 203 aaPredicted RBP14.41□□□□□ -0.1
PTPRC-206ENST00000413409 Q9N2K0 584 aa14.41□□□□□ -0.1
PTPRC-206ENST00000413409 PURGQ9UJV8 347 aaKnown RBP14.41□□□□□ -0.1
PTPRC-206ENST00000413409 IGHV2OR16-5A0A0B4J2B6 119 aa14.41□□□□□ -0.1
PTPRC-206ENST00000413409 IGHV1-18A0A0C4DH31 117 aa14.41□□□□□ -0.1
PTPRC-206ENST00000413409 KIR2DS1A0A191URI9 304 aa14.41□□□□□ -0.1
PTPRC-206ENST00000413409 RP2O75695 350 aa14.41□□□□□ -0.1
PTPRC-206ENST00000413409 ZNF728P0DKX0 622 aa14.41□□□□□ -0.1
PTPRC-206ENST00000413409 GLRA1P23415 457 aa14.41□□□□□ -0.1
PTPRC-206ENST00000413409 MDH2P40926 338 aaKnown RBP14.41□□□□□ -0.1
PTPRC-206ENST00000413409 KIR2DS4P43632 304 aa14.41□□□□□ -0.1
PTPRC-206ENST00000413409 ERVK11-1P61568 191 aa14.41□□□□□ -0.1
PTPRC-206ENST00000413409 RBM39Q14498 530 aaKnown RBP14.41□□□□□ -0.1
PTPRC-206ENST00000413409 KIR2DS1Q14954 304 aa14.41□□□□□ -0.1
PTPRC-206ENST00000413409 OR8G1Q15617 311 aa14.41□□□□□ -0.1
PTPRC-206ENST00000413409 TIMM23BQ5SRD1 257 aa14.41□□□□□ -0.1
PTPRC-206ENST00000413409 MBNL2Q5VZF2 373 aaKnown RBP14.41□□□□□ -0.1
PTPRC-206ENST00000413409 C11orf87Q6NUJ2 197 aa14.41□□□□□ -0.1
PTPRC-206ENST00000413409 BRICD5Q6PL45 260 aa14.41□□□□□ -0.1
PTPRC-206ENST00000413409 C22orf34Q6ZV56 151 aa14.41□□□□□ -0.1
PTPRC-206ENST00000413409 KCTD9Q7L273 389 aa14.41□□□□□ -0.1
PTPRC-206ENST00000413409 WDR86Q86TI4 376 aa14.41□□□□□ -0.1
PTPRC-206ENST00000413409 IL36RNQ9UBH0 155 aa14.41□□□□□ -0.1
PTPRC-206ENST00000413409 UBQLN2Q9UHD9 624 aa14.41□□□□□ -0.1
PTPRC-206ENST00000413409 PKD1L1Q8TDX9 2849 aa14.4□□□□□ -0.1
PTPRC-206ENST00000413409 A0A0D9SG52 128 aa14.4□□□□□ -0.1
PTPRC-206ENST00000413409 A0A1B0GWJ7 208 aa14.4□□□□□ -0.1
PTPRC-206ENST00000413409 OR2F2O95006 317 aa14.4□□□□□ -0.1
PTPRC-206ENST00000413409 PGA5P0DJD9 388 aa14.4□□□□□ -0.1
PTPRC-206ENST00000413409 PI3P19957 117 aa14.4□□□□□ -0.1
PTPRC-206ENST00000413409 SERPINF1P36955 418 aa14.4□□□□□ -0.1
PTPRC-206ENST00000413409 RBMXP38159 391 aaKnown RBP14.4□□□□□ -0.1
PTPRC-206ENST00000413409 MPV17P39210 176 aa14.4□□□□□ -0.1
PTPRC-206ENST00000413409 HERV-K104P61576 105 aa14.4□□□□□ -0.1
PTPRC-206ENST00000413409 OR2F1Q13607 317 aa14.4□□□□□ -0.1
PTPRC-206ENST00000413409 EXOSC2Q13868 293 aaKnown RBP14.4□□□□□ -0.1
PTPRC-206ENST00000413409 PDCD1Q15116 288 aa14.4□□□□□ -0.1
PTPRC-206ENST00000413409 SLC9A3R2Q15599 337 aa14.4□□□□□ -0.1
PTPRC-206ENST00000413409 ANKRD55Q3KP44 614 aa14.4□□□□□ -0.1
PTPRC-206ENST00000413409 ZNF880Q6PDB4 577 aa14.4□□□□□ -0.1
PTPRC-206ENST00000413409 MOB1BQ7L9L4 216 aa14.4□□□□□ -0.1
PTPRC-206ENST00000413409 SGPP2Q8IWX5 399 aa14.4□□□□□ -0.1
PTPRC-206ENST00000413409 SLC38A6Q8IZM9 456 aa14.4□□□□□ -0.1
PTPRC-206ENST00000413409 BATF2Q8N1L9 274 aa14.4□□□□□ -0.1
PTPRC-206ENST00000413409 SPERTQ8NA61 448 aa14.4□□□□□ -0.1
PTPRC-206ENST00000413409 SUMF2Q8NBJ7 301 aa14.4□□□□□ -0.1
PTPRC-206ENST00000413409 SCCPDHQ8NBX0 429 aa14.4□□□□□ -0.1
PTPRC-206ENST00000413409 OR8G5Q8NG78 346 aa14.4□□□□□ -0.1
PTPRC-206ENST00000413409 TMEM171Q8WVE6 324 aa14.4□□□□□ -0.1
PTPRC-206ENST00000413409 PPP1R1CQ8WVI7 109 aa14.4□□□□□ -0.1
PTPRC-206ENST00000413409 NRIP2Q9BQI9 281 aa14.4□□□□□ -0.1
PTPRC-206ENST00000413409 MFFQ9GZY8 342 aa14.4□□□□□ -0.1
PTPRC-206ENST00000413409 C1orf123Q9NWV4 160 aa14.4□□□□□ -0.1
PTPRC-206ENST00000413409 TNFSF18Q9UNG2 199 aa14.4□□□□□ -0.1
PTPRC-206ENST00000413409 MAB21L2Q9Y586 359 aa14.4□□□□□ -0.1
PTPRC-206ENST00000413409 NOS1APO75052 506 aaPredicted RBP14.39□□□□□ -0.11
PTPRC-206ENST00000413409 CTXN2P0C2S0 81 aa14.39□□□□□ -0.11
PTPRC-206ENST00000413409 FCGR2CP31995 323 aa14.39□□□□□ -0.11
PTPRC-206ENST00000413409 ZNF154Q13106 437 aa14.39□□□□□ -0.11
PTPRC-206ENST00000413409 ZNF718Q3SXZ3 478 aa14.39□□□□□ -0.11
PTPRC-206ENST00000413409 GALNT14Q96FL9 552 aa14.39□□□□□ -0.11
PTPRC-206ENST00000413409 ZNF488Q96MN9 340 aa14.39□□□□□ -0.11
PTPRC-206ENST00000413409 ARL6Q9H0F7 186 aa14.39□□□□□ -0.11
PTPRC-206ENST00000413409 TLNRD1Q9H1K6 362 aa14.39□□□□□ -0.11
PTPRC-206ENST00000413409 WDR13Q9H1Z4 485 aa14.39□□□□□ -0.11
PTPRC-206ENST00000413409 NAA60Q9H7X0 242 aa14.39□□□□□ -0.11
PTPRC-206ENST00000413409 TMEM100Q9NV29 134 aa14.39□□□□□ -0.11
PTPRC-206ENST00000413409 TREM2Q9NZC2 230 aa14.39□□□□□ -0.11
PTPRC-206ENST00000413409 TRBV6-7A0A0A0MS04 114 aa14.38□□□□□ -0.11
PTPRC-206ENST00000413409 TRAV24A0A0B4J272 114 aa14.38□□□□□ -0.11
PTPRC-206ENST00000413409 C5orf51A6NDU8 294 aa14.38□□□□□ -0.11
PTPRC-206ENST00000413409 FAM25EA8MYX2 175 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms