RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 BLVRBP30043 206 aaPredicted RBP16.13■□□□□ 0.17
PDLIM2-207ENST00000409417 GDNFP39905 211 aa16.13■□□□□ 0.17
PDLIM2-207ENST00000409417 ABHD12Q8N2K0 398 aa16.13■□□□□ 0.17
PDLIM2-207ENST00000409417 TMEM86BQ8N661 226 aa16.13■□□□□ 0.17
PDLIM2-207ENST00000409417 KIRREL1Q96J84 757 aa16.13■□□□□ 0.17
PDLIM2-207ENST00000409417 C19orf24Q9BVV8 132 aa16.13■□□□□ 0.17
PDLIM2-207ENST00000409417 CLEC7AQ9BXN2 247 aa16.13■□□□□ 0.17
PDLIM2-207ENST00000409417 ZNRD1Q9P1U0 126 aa16.13■□□□□ 0.17
PDLIM2-207ENST00000409417 POMT1Q9Y6A1 747 aa16.13■□□□□ 0.17
PDLIM2-207ENST00000409417 A0A087X0M5 115 aa16.12■□□□□ 0.17
PDLIM2-207ENST00000409417 A0A1B0GX30 115 aa16.12■□□□□ 0.17
PDLIM2-207ENST00000409417 SMIM30A4D0T7 59 aa16.12■□□□□ 0.17
PDLIM2-207ENST00000409417 AIREO43918 545 aa16.12■□□□□ 0.17
PDLIM2-207ENST00000409417 RNASE1P07998 156 aaKnown RBP16.12■□□□□ 0.17
PDLIM2-207ENST00000409417 CD34P28906 385 aa16.12■□□□□ 0.17
PDLIM2-207ENST00000409417 SSTR5P35346 364 aa16.12■□□□□ 0.17
PDLIM2-207ENST00000409417 IER3P46695 156 aa16.12■□□□□ 0.17
PDLIM2-207ENST00000409417 DYNC1I2Q13409 638 aaKnown RBP16.12■□□□□ 0.17
PDLIM2-207ENST00000409417 C6orf201Q7Z4U5 140 aa16.12■□□□□ 0.17
PDLIM2-207ENST00000409417 RTN4RL2Q86UN3 420 aa16.12■□□□□ 0.17
PDLIM2-207ENST00000409417 BEND2Q8NDZ0 799 aa16.12■□□□□ 0.17
PDLIM2-207ENST00000409417 RFESDQ8TAC1 157 aa16.12■□□□□ 0.17
PDLIM2-207ENST00000409417 CCDC107Q8WV48 283 aa16.12■□□□□ 0.17
PDLIM2-207ENST00000409417 SULT4A1Q9BR01 284 aa16.12■□□□□ 0.17
PDLIM2-207ENST00000409417 FAAP24Q9BTP7 215 aa16.12■□□□□ 0.17
PDLIM2-207ENST00000409417 TBL2Q9Y4P3 447 aaKnown RBP16.12■□□□□ 0.17
PDLIM2-207ENST00000409417 ORC5O43913 435 aa16.11■□□□□ 0.17
PDLIM2-207ENST00000409417 SLC2A2P11168 524 aaPredicted RBP16.11■□□□□ 0.17
PDLIM2-207ENST00000409417 BAIAP2L2Q6UXY1 529 aa16.11■□□□□ 0.17
PDLIM2-207ENST00000409417 OR10A7Q8NGE5 316 aa16.11■□□□□ 0.17
PDLIM2-207ENST00000409417 OR56B1Q8NGI3 324 aa16.11■□□□□ 0.17
PDLIM2-207ENST00000409417 DPAGT1Q9H3H5 408 aa16.11■□□□□ 0.17
PDLIM2-207ENST00000409417 PLEKHJ1Q9NW61 149 aa16.11■□□□□ 0.17
PDLIM2-207ENST00000409417 IDI2-AS1Q9NZ38 188 aa16.11■□□□□ 0.17
PDLIM2-207ENST00000409417 TRAPPC2LQ9UL33 140 aa16.11■□□□□ 0.17
PDLIM2-207ENST00000409417 A0A0B4J203 849 aa16.1■□□□□ 0.17
PDLIM2-207ENST00000409417 FOXI3A8MTJ6 420 aaPredicted RBP16.1■□□□□ 0.17
PDLIM2-207ENST00000409417 C15orf65H3BRN8 121 aa16.1■□□□□ 0.17
PDLIM2-207ENST00000409417 SOCS1O15524 211 aa16.1■□□□□ 0.17
PDLIM2-207ENST00000409417 IGHV4-59P01825 116 aa16.1■□□□□ 0.17
PDLIM2-207ENST00000409417 RAB6AP20340 208 aa16.1■□□□□ 0.17
PDLIM2-207ENST00000409417 FAM189A2Q15884 450 aa16.1■□□□□ 0.17
PDLIM2-207ENST00000409417 SFXN4Q6P4A7 337 aa16.1■□□□□ 0.17
PDLIM2-207ENST00000409417 LHFPL4Q7Z7J7 247 aa16.1■□□□□ 0.17
PDLIM2-207ENST00000409417 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.1■□□□□ 0.17
PDLIM2-207ENST00000409417 OR13F1Q8NGS4 319 aa16.1■□□□□ 0.17
PDLIM2-207ENST00000409417 OR4K15Q8NH41 348 aa16.1■□□□□ 0.17
PDLIM2-207ENST00000409417 PTX4Q96A99 478 aa16.1■□□□□ 0.17
PDLIM2-207ENST00000409417 CYYR1Q96J86 154 aa16.1■□□□□ 0.17
PDLIM2-207ENST00000409417 MEGF9Q9H1U4 602 aa16.1■□□□□ 0.17
PDLIM2-207ENST00000409417 HSF4Q9ULV5 492 aa16.1■□□□□ 0.17
PDLIM2-207ENST00000409417 NFYBP25208 207 aa16.1■□□□□ 0.17
PDLIM2-207ENST00000409417 VEGFCP49767 419 aa16.1■□□□□ 0.17
PDLIM2-207ENST00000409417 MXD1Q05195 221 aa16.1■□□□□ 0.17
PDLIM2-207ENST00000409417 PLA2G7Q13093 441 aa16.1■□□□□ 0.17
PDLIM2-207ENST00000409417 C6orf183Q5T699 404 aa16.1■□□□□ 0.17
PDLIM2-207ENST00000409417 MINOS1Q5TGZ0 78 aa16.1■□□□□ 0.17
PDLIM2-207ENST00000409417 C16orf87Q6PH81 154 aa16.1■□□□□ 0.17
PDLIM2-207ENST00000409417 ZNF596Q8TC21 504 aa16.1■□□□□ 0.17
PDLIM2-207ENST00000409417 ARL11Q969Q4 196 aa16.1■□□□□ 0.17
PDLIM2-207ENST00000409417 MALSU1Q96EH3 234 aa16.1■□□□□ 0.17
PDLIM2-207ENST00000409417 ZNF286AQ9HBT8 521 aa16.1■□□□□ 0.17
PDLIM2-207ENST00000409417 DAPK2Q9UIK4 370 aa16.1■□□□□ 0.17
PDLIM2-207ENST00000409417 MINOS1-NBL1R4GNA1 71 aa16.1■□□□□ 0.17
PDLIM2-207ENST00000409417 FAM172BPA6NC97 362 aa16.09■□□□□ 0.17
PDLIM2-207ENST00000409417 IGLV1-47P01700 117 aa16.09■□□□□ 0.17
PDLIM2-207ENST00000409417 CLEC2LP0C7M8 214 aa16.09■□□□□ 0.17
PDLIM2-207ENST00000409417 RCC1P18754 421 aaPredicted RBP16.09■□□□□ 0.17
PDLIM2-207ENST00000409417 EFNB2P52799 333 aa16.09■□□□□ 0.17
PDLIM2-207ENST00000409417 TMEM50BP56557 158 aa16.09■□□□□ 0.17
PDLIM2-207ENST00000409417 AANATQ16613 207 aa16.09■□□□□ 0.17
PDLIM2-207ENST00000409417 LDLRAD2Q5SZI1 272 aa16.09■□□□□ 0.17
PDLIM2-207ENST00000409417 TRAT1Q6PIZ9 186 aa16.09■□□□□ 0.17
PDLIM2-207ENST00000409417 SLC16A12Q6ZSM3 486 aa16.09■□□□□ 0.17
PDLIM2-207ENST00000409417 OR4P4Q8NGL7 312 aa16.09■□□□□ 0.17
PDLIM2-207ENST00000409417 MRPL30Q8TCC3 161 aaKnown RBP16.09■□□□□ 0.17
PDLIM2-207ENST00000409417 FUNDC2Q9BWH2 189 aa16.09■□□□□ 0.17
PDLIM2-207ENST00000409417 MRPS26Q9BYN8 205 aaKnown RBP16.09■□□□□ 0.17
PDLIM2-207ENST00000409417 CHIAQ9BZP6 476 aa16.09■□□□□ 0.17
PDLIM2-207ENST00000409417 RAB9BQ9NP90 201 aa16.09■□□□□ 0.17
PDLIM2-207ENST00000409417 MBNL3Q9NUK0 354 aaKnown RBP16.09■□□□□ 0.17
PDLIM2-207ENST00000409417 BTBD17A6NE02 478 aa16.08■□□□□ 0.16
PDLIM2-207ENST00000409417 C12orf77C9JDV5 145 aa16.08■□□□□ 0.16
PDLIM2-207ENST00000409417 TOR1AO14656 332 aa16.08■□□□□ 0.16
PDLIM2-207ENST00000409417 SPINT2O43291 252 aa16.08■□□□□ 0.16
PDLIM2-207ENST00000409417 HTR1DP28221 377 aa16.08■□□□□ 0.16
PDLIM2-207ENST00000409417 PRRX1P54821 245 aa16.08■□□□□ 0.16
PDLIM2-207ENST00000409417 UTF1Q5T230 341 aa16.08■□□□□ 0.16
PDLIM2-207ENST00000409417 Q6ZTK2 550 aa16.08■□□□□ 0.16
PDLIM2-207ENST00000409417 ZNF554Q86TJ5 538 aa16.08■□□□□ 0.16
PDLIM2-207ENST00000409417 OR52M1Q8NGK5 317 aa16.08■□□□□ 0.16
PDLIM2-207ENST00000409417 OR5R1Q8NH85 324 aa16.08■□□□□ 0.16
PDLIM2-207ENST00000409417 ARHGAP5-AS1Q96IT6 56 aa16.08■□□□□ 0.16
PDLIM2-207ENST00000409417 RIMS4Q9H426 269 aaPredicted RBP16.08■□□□□ 0.16
PDLIM2-207ENST00000409417 TNFRSF19Q9NS68 423 aa16.08■□□□□ 0.16
PDLIM2-207ENST00000409417 METTL21EPA6NDL7 271 aa16.07■□□□□ 0.16
PDLIM2-207ENST00000409417 F2RL2O00254 374 aa16.07■□□□□ 0.16
PDLIM2-207ENST00000409417 NAPSAO96009 420 aa16.07■□□□□ 0.16
PDLIM2-207ENST00000409417 SSX2Q16385 188 aa16.07■□□□□ 0.16
PDLIM2-207ENST00000409417 LTC4SQ16873 150 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms