RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 OPN1MWP04001 364 aa11□□□□□ -0.65
CXCL12-205ENST00000395794 CDK1P06493 297 aa11□□□□□ -0.65
CXCL12-205ENST00000395794 OPN1MW2P0DN77 364 aa11□□□□□ -0.65
CXCL12-205ENST00000395794 OPN1MW3P0DN78 364 aa11□□□□□ -0.65
CXCL12-205ENST00000395794 RAB7AP51149 207 aa11□□□□□ -0.65
CXCL12-205ENST00000395794 HES1Q14469 280 aa11□□□□□ -0.65
CXCL12-205ENST00000395794 ABCA11PQ4W5N1 156 aa11□□□□□ -0.65
CXCL12-205ENST00000395794 PDLIM3Q53GG5 364 aaPredicted RBP11□□□□□ -0.65
CXCL12-205ENST00000395794 NDUFA11Q86Y39 141 aa11□□□□□ -0.65
CXCL12-205ENST00000395794 OR4F17Q8NGA8 305 aa11□□□□□ -0.65
CXCL12-205ENST00000395794 CCDC107Q8WV48 283 aa11□□□□□ -0.65
CXCL12-205ENST00000395794 ARL11Q969Q4 196 aa11□□□□□ -0.65
CXCL12-205ENST00000395794 OR4F4Q96R69 305 aa11□□□□□ -0.65
CXCL12-205ENST00000395794 UQCC2Q9BRT2 126 aa11□□□□□ -0.65
CXCL12-205ENST00000395794 SELENOIQ9C0D9 397 aa11□□□□□ -0.65
CXCL12-205ENST00000395794 WNT10AQ9GZT5 417 aa11□□□□□ -0.65
CXCL12-205ENST00000395794 FKBP14Q9NWM8 211 aa11□□□□□ -0.65
CXCL12-205ENST00000395794 TRAPPC2LQ9UL33 140 aa11□□□□□ -0.65
CXCL12-205ENST00000395794 DSCAML1Q8TD84 2053 aa11□□□□□ -0.65
CXCL12-205ENST00000395794 A0A1W2PP11 408 aa10.99□□□□□ -0.65
CXCL12-205ENST00000395794 SPINT2O43291 252 aa10.99□□□□□ -0.65
CXCL12-205ENST00000395794 ORC5O43913 435 aa10.99□□□□□ -0.65
CXCL12-205ENST00000395794 MT-ND4P03905 459 aa10.99□□□□□ -0.65
CXCL12-205ENST00000395794 IL3RAP26951 378 aa10.99□□□□□ -0.65
CXCL12-205ENST00000395794 GABPB1Q06547 395 aaPredicted RBP10.99□□□□□ -0.65
CXCL12-205ENST00000395794 ACSM3Q53FZ2 586 aa10.99□□□□□ -0.65
CXCL12-205ENST00000395794 C9orf152Q5JTZ5 239 aa10.99□□□□□ -0.65
CXCL12-205ENST00000395794 C6orf141Q5SZD1 244 aa10.99□□□□□ -0.65
CXCL12-205ENST00000395794 RNLSQ5VYX0 342 aa10.99□□□□□ -0.65
CXCL12-205ENST00000395794 RAB12Q6IQ22 244 aa10.99□□□□□ -0.65
CXCL12-205ENST00000395794 ZNF497Q6ZNH5 498 aa10.99□□□□□ -0.65
CXCL12-205ENST00000395794 Q6ZS46 218 aa10.99□□□□□ -0.65
CXCL12-205ENST00000395794 THNSL2Q86YJ6 484 aa10.99□□□□□ -0.65
CXCL12-205ENST00000395794 OR8H3Q8N146 312 aa10.99□□□□□ -0.65
CXCL12-205ENST00000395794 LYG1Q8N1E2 194 aa10.99□□□□□ -0.65
CXCL12-205ENST00000395794 OR5AU1Q8NGC0 362 aa10.99□□□□□ -0.65
CXCL12-205ENST00000395794 OR52M1Q8NGK5 317 aa10.99□□□□□ -0.65
CXCL12-205ENST00000395794 OR56B4Q8NH76 319 aa10.99□□□□□ -0.65
CXCL12-205ENST00000395794 CITED2Q99967 270 aaPredicted RBP10.99□□□□□ -0.65
CXCL12-205ENST00000395794 CST11Q9H112 138 aa10.99□□□□□ -0.65
CXCL12-205ENST00000395794 VCX3BQ9H321 246 aa10.99□□□□□ -0.65
CXCL12-205ENST00000395794 ETAA1Q9NY74 926 aa10.99□□□□□ -0.65
CXCL12-205ENST00000395794 ZNF581Q9P0T4 197 aa10.99□□□□□ -0.65
CXCL12-205ENST00000395794 GHRLQ9UBU3 117 aa10.99□□□□□ -0.65
CXCL12-205ENST00000395794 TPRKBQ9Y3C4 175 aa10.99□□□□□ -0.65
CXCL12-205ENST00000395794 PEX16Q9Y5Y5 336 aa10.99□□□□□ -0.65
CXCL12-205ENST00000395794 TET2Q6N021 2002 aaPredicted RBP10.99□□□□□ -0.65
CXCL12-205ENST00000395794 VWFP04275 2813 aa10.99□□□□□ -0.65
CXCL12-205ENST00000395794 FAM90A10PA6NDY2 464 aa10.98□□□□□ -0.65
CXCL12-205ENST00000395794 FAM90A18PA6NE21 464 aa10.98□□□□□ -0.65
CXCL12-205ENST00000395794 FAM90A16PA6NEW6 464 aa10.98□□□□□ -0.65
CXCL12-205ENST00000395794 FAM90A20PA6NIJ5 464 aa10.98□□□□□ -0.65
CXCL12-205ENST00000395794 FAM90A7PA6NKC0 464 aa10.98□□□□□ -0.65
CXCL12-205ENST00000395794 FAM90A12PA8MX19 464 aa10.98□□□□□ -0.65
CXCL12-205ENST00000395794 FAM90A5PA8MXJ8 464 aa10.98□□□□□ -0.65
CXCL12-205ENST00000395794 FAM90A23PA8MXZ1 464 aa10.98□□□□□ -0.65
CXCL12-205ENST00000395794 CA11O75493 328 aa10.98□□□□□ -0.65
CXCL12-205ENST00000395794 GAPDHP04406 335 aaKnown RBP10.98□□□□□ -0.65
CXCL12-205ENST00000395794 LPLP06858 475 aa10.98□□□□□ -0.65
CXCL12-205ENST00000395794 SNRNP70P08621 437 aaKnown RBP10.98□□□□□ -0.65
CXCL12-205ENST00000395794 FAM90A15PP0C7V4 464 aa10.98□□□□□ -0.65
CXCL12-205ENST00000395794 FAM90A13PP0C7W8 464 aa10.98□□□□□ -0.65
CXCL12-205ENST00000395794 FAM90A14PP0C7W9 464 aa10.98□□□□□ -0.65
CXCL12-205ENST00000395794 FAM90A24PP0C7X0 464 aa10.98□□□□□ -0.65
CXCL12-205ENST00000395794 MGMTP16455 207 aa10.98□□□□□ -0.65
CXCL12-205ENST00000395794 GPR50Q13585 617 aa10.98□□□□□ -0.65
CXCL12-205ENST00000395794 SPHARQ15513 63 aa10.98□□□□□ -0.65
CXCL12-205ENST00000395794 MED22Q15528 200 aa10.98□□□□□ -0.65
CXCL12-205ENST00000395794 TMEM95Q3KNT9 176 aa10.98□□□□□ -0.65
CXCL12-205ENST00000395794 UTF1Q5T230 341 aa10.98□□□□□ -0.65
CXCL12-205ENST00000395794 C6orf183Q5T699 404 aa10.98□□□□□ -0.65
CXCL12-205ENST00000395794 HIST2H2BDQ6DRA6 164 aa10.98□□□□□ -0.65
CXCL12-205ENST00000395794 DRAM1Q8N682 238 aa10.98□□□□□ -0.65
CXCL12-205ENST00000395794 R3HDM4Q96D70 268 aa10.98□□□□□ -0.65
CXCL12-205ENST00000395794 OCSTAMPQ9BR26 566 aa10.98□□□□□ -0.65
CXCL12-205ENST00000395794 TMED9Q9BVK6 235 aa10.98□□□□□ -0.65
CXCL12-205ENST00000395794 BANF2Q9H503 90 aa10.98□□□□□ -0.65
CXCL12-205ENST00000395794 NKX1-2Q9UD57 310 aaPredicted RBP10.98□□□□□ -0.65
CXCL12-205ENST00000395794 MOB4Q9Y3A3 225 aa10.98□□□□□ -0.65
CXCL12-205ENST00000395794 CMYA5Q8N3K9 4069 aa10.97□□□□□ -0.65
CXCL12-205ENST00000395794 A0A1W2PPE3 182 aa10.97□□□□□ -0.65
CXCL12-205ENST00000395794 H0YHG0 523 aa10.97□□□□□ -0.65
CXCL12-205ENST00000395794 CCRL2O00421 344 aa10.97□□□□□ -0.65
CXCL12-205ENST00000395794 PIN1P1O15428 100 aa10.97□□□□□ -0.65
CXCL12-205ENST00000395794 GLAP06280 429 aa10.97□□□□□ -0.65
CXCL12-205ENST00000395794 UBBP0CG47 229 aa10.97□□□□□ -0.65
CXCL12-205ENST00000395794 TMEM11P17152 192 aa10.97□□□□□ -0.65
CXCL12-205ENST00000395794 FUT3P21217 361 aa10.97□□□□□ -0.65
CXCL12-205ENST00000395794 TMEM30BQ3MIR4 351 aa10.97□□□□□ -0.65
CXCL12-205ENST00000395794 GLT8D1Q68CQ7 371 aa10.97□□□□□ -0.65
CXCL12-205ENST00000395794 TRAT1Q6PIZ9 186 aa10.97□□□□□ -0.65
CXCL12-205ENST00000395794 MOB3BQ86TA1 216 aa10.97□□□□□ -0.65
CXCL12-205ENST00000395794 C1QL4Q86Z23 238 aa10.97□□□□□ -0.65
CXCL12-205ENST00000395794 OR4X2Q8NGF9 303 aa10.97□□□□□ -0.65
CXCL12-205ENST00000395794 KCNIP1Q9NZI2 227 aa10.97□□□□□ -0.65
CXCL12-205ENST00000395794 RCC2Q9P258 522 aaKnown RBP10.97□□□□□ -0.65
CXCL12-205ENST00000395794 GNG12Q9UBI6 72 aa10.97□□□□□ -0.65
CXCL12-205ENST00000395794 A0A1W2PPI3 338 aa10.96□□□□□ -0.65
CXCL12-205ENST00000395794 TCRBV4S1A1TA0A5B7 111 aa10.96□□□□□ -0.65
CXCL12-205ENST00000395794 C15orf65H3BRN8 121 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms