RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 RPL24P83731 157 aaKnown RBP4.29□□□□□ -1.72
PCDH9-201ENST00000377861 PRR22Q8IZ63 422 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 JSRP1Q96MG2 331 aaPredicted RBP4.29□□□□□ -1.72
PCDH9-201ENST00000377861 C5orf66Q9H5L9 145 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 ARAP2Q8WZ64 1704 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 MLF1P58340 268 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 SEC11AP67812 179 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 MRPL30Q8TCC3 161 aaKnown RBP4.29□□□□□ -1.72
PCDH9-201ENST00000377861 SNX22Q96L94 193 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 RAMP1O60894 148 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 TMEM50BP56557 158 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 MIEN1Q9BRT3 115 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 OR2H1Q9GZK4 316 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 ANKRD10Q9NXR5 420 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 ANKRD36CQ5JPF3 1778 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 SPNP16150 400 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 NME2P22392 152 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 TMEM42Q69YG0 159 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 HIF1ANQ9NWT6 349 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 G3V3Y1 287 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 PRRG2O14669 202 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 WDR77Q9BQA1 342 aaPredicted RBP4.29□□□□□ -1.72
PCDH9-201ENST00000377861 FAAP24Q9BTP7 215 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 LRRC3CA6NJW4 275 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 LINC00587B1AMM8 73 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 C11orf94C9JXX5 98 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 RNF151Q2KHN1 245 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 RP1L1Q8IWN7 2480 aaPredicted RBP4.29□□□□□ -1.72
PCDH9-201ENST00000377861 GOSR1O95249 250 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 CT83Q5H943 113 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 C9orf135Q5VTT2 229 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 OR4F17Q8NGA8 305 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 OR4F5Q8NH21 305 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 OR4F4Q96R69 305 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 SIRT4Q9Y6E7 314 aaPredicted RBP4.29□□□□□ -1.72
PCDH9-201ENST00000377861 GDF1P27539 372 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 LRRC10Q5BKY1 277 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 R3HDMLQ9H3Y0 253 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 SIPA1L3O60292 1781 aaPredicted RBP4.29□□□□□ -1.72
PCDH9-201ENST00000377861 OR2T8A6NH00 312 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 ZNF705GA8MUZ8 300 aaPredicted RBP4.29□□□□□ -1.72
PCDH9-201ENST00000377861 CCL20P78556 96 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 ZNF468Q5VIY5 522 aaPredicted RBP4.29□□□□□ -1.72
PCDH9-201ENST00000377861 WFDC5Q8TCV5 224 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 SHISA5Q8N114 240 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 KCNE3Q9Y6H6 103 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 OR10J4P0C629 311 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 BCL3P20749 454 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 SPANXN5Q5MJ07 72 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 COLCA1Q6ZS62 124 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 F5P12259 2224 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 ZNF253O75346 499 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 AVPR2P30518 371 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 ACSM6Q6P461 480 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 CHCHD1Q96BP2 118 aaKnown RBP4.29□□□□□ -1.72
PCDH9-201ENST00000377861 AGPAT2O15120 278 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 WDR1O75083 606 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 CA3P07451 260 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 P2RY4P51582 365 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 RND2P52198 227 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 ZNF648Q5T619 568 aaPredicted RBP4.29□□□□□ -1.72
PCDH9-201ENST00000377861 OR51G1Q8NGK1 321 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 KLK6Q92876 244 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 OPN3Q9H1Y3 402 aaPredicted RBP4.29□□□□□ -1.72
PCDH9-201ENST00000377861 MPV17P39210 176 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 SELENOPP49908 381 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 OR10G3Q8NGC4 313 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 LRRC61Q9BV99 259 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 PAPPAQ13219 1627 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 RTN4RL2Q86UN3 420 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 ST20Q9HBF5 79 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 SIX6O95475 246 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 DTD1Q8TEA8 209 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 ARTNQ5T4W7 220 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 SMRP1Q8NCR6 262 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 RNF167Q9H6Y7 350 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 PSMB5P28074 263 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 RAB1BQ9H0U4 201 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 SNRPNP63162 240 aaKnown RBP4.28□□□□□ -1.72
PCDH9-201ENST00000377861 REC114Q7Z4M0 266 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 IL1F10Q8WWZ1 152 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 NDUFAF3Q9BU61 184 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 NHSL1Q5SYE7 1610 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 RGPD5Q99666 1765 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 QRFPP83859 136 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 ZNF705FA8MVS1 300 aaPredicted RBP4.28□□□□□ -1.72
PCDH9-201ENST00000377861 ZNF705DP0CH99 300 aaPredicted RBP4.28□□□□□ -1.72
PCDH9-201ENST00000377861 ID2Q02363 134 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 ZNF441Q8N8Z8 693 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 SUMF1Q8NBK3 374 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 MRGPRDQ8TDS7 321 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 NUP98P52948 1817 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 STAG3L3P0CL85 134 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 TIMM8AO60220 97 aaPredicted RBP4.28□□□□□ -1.72
PCDH9-201ENST00000377861 YRDCQ86U90 279 aaKnown RBP4.28□□□□□ -1.72
PCDH9-201ENST00000377861 ZNF596Q8TC21 504 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 CA5BP1Q8WTZ4 195 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 GSN-AS1Q9NRJ2 163 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 MS4A18H0YCH9 400 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 CFIP05156 583 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms