RNA–Protein interactions for RNA: ENST00000377499.9

LMO7-204, Transcript of LIM domain 7, human

TSL 2

Gene LMO7, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-204	ENST00000377499	HRASLS	Q9HDD0	168 aa		10.04	□□□□□ -0.8
LMO7-204	ENST00000377499	PUS1	Q9Y606	427 aa	Known RBP eCLIP	10.04	□□□□□ -0.8
LMO7-204	ENST00000377499		V9GYS6	101 aa		10.04	□□□□□ -0.8
LMO7-204	ENST00000377499	OR2C1	O95371	312 aa		10.04	□□□□□ -0.8
LMO7-204	ENST00000377499	CYB5A	P00167	134 aa		10.04	□□□□□ -0.8
LMO7-204	ENST00000377499	TUBG1	P23258	451 aa		10.04	□□□□□ -0.8
LMO7-204	ENST00000377499	ZNF83	P51522	516 aa		10.04	□□□□□ -0.8
LMO7-204	ENST00000377499	C1orf100	Q5SVJ3	147 aa		10.04	□□□□□ -0.8
LMO7-204	ENST00000377499	OR1J1	Q8NGS3	322 aa		10.04	□□□□□ -0.8
LMO7-204	ENST00000377499	FAM57A	Q8TBR7	257 aa		10.04	□□□□□ -0.8
LMO7-204	ENST00000377499	MUCL1	Q96DR8	90 aa		10.04	□□□□□ -0.8
LMO7-204	ENST00000377499	NICN1	Q9BSH3	213 aa		10.04	□□□□□ -0.8
LMO7-204	ENST00000377499	PLSCR2	Q9NRY7	297 aa		10.04	□□□□□ -0.8
LMO7-204	ENST00000377499	DKK4	Q9UBT3	224 aa		10.04	□□□□□ -0.8
LMO7-204	ENST00000377499	FZR1	Q9UM11	496 aa		10.04	□□□□□ -0.8
LMO7-204	ENST00000377499	PYCARD-AS1	I3L0S3	204 aa		10.03	□□□□□ -0.8
LMO7-204	ENST00000377499	HERPUD1	Q15011	391 aa		10.03	□□□□□ -0.8
LMO7-204	ENST00000377499	GABRA6	Q16445	453 aa		10.03	□□□□□ -0.8
LMO7-204	ENST00000377499	BHLHA15	Q7RTS1	189 aa	Predicted RBP	10.03	□□□□□ -0.8
LMO7-204	ENST00000377499	C1QL2	Q7Z5L3	287 aa		10.03	□□□□□ -0.8
LMO7-204	ENST00000377499	STARD4	Q96DR4	205 aa		10.03	□□□□□ -0.8
LMO7-204	ENST00000377499	POM121L2	Q96KW2	1035 aa		10.03	□□□□□ -0.8
LMO7-204	ENST00000377499	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	10.03	□□□□□ -0.8	3e-6	■■□□□ 11.8
LMO7-204	ENST00000377499	ZNF391	Q9UJN7	358 aa		10.03	□□□□□ -0.8
LMO7-204	ENST00000377499	ROS1	P08922	2347 aa		10.03	□□□□□ -0.8
LMO7-204	ENST00000377499	ZNF727	A8MUV8	499 aa		10.03	□□□□□ -0.8
LMO7-204	ENST00000377499		C9JQL5	133 aa		10.03	□□□□□ -0.8
LMO7-204	ENST00000377499	PRAF2	O60831	178 aa		10.03	□□□□□ -0.8
LMO7-204	ENST00000377499	IRF2	P14316	349 aa		10.03	□□□□□ -0.8
LMO7-204	ENST00000377499	BLVRB	P30043	206 aa	Predicted RBP	10.03	□□□□□ -0.8
LMO7-204	ENST00000377499	FAU	P35544	74 aa	Known RBP	10.03	□□□□□ -0.8
LMO7-204	ENST00000377499	CDKN1B	P46527	198 aa		10.03	□□□□□ -0.8
LMO7-204	ENST00000377499	SULT1A1	P50225	295 aa		10.03	□□□□□ -0.8
LMO7-204	ENST00000377499	FABP6	P51161	128 aa		10.03	□□□□□ -0.8
LMO7-204	ENST00000377499	GPM6A	P51674	278 aa		10.03	□□□□□ -0.8
LMO7-204	ENST00000377499	RPUSD3	Q6P087	351 aa	Known RBP	10.03	□□□□□ -0.8
LMO7-204	ENST00000377499	DHRS11	Q6UWP2	260 aa		10.03	□□□□□ -0.8
LMO7-204	ENST00000377499	NUDCD2	Q8WVJ2	157 aa		10.03	□□□□□ -0.8
LMO7-204	ENST00000377499	WFDC12	Q8WWY7	111 aa		10.03	□□□□□ -0.8
LMO7-204	ENST00000377499	SNX22	Q96L94	193 aa		10.03	□□□□□ -0.8
LMO7-204	ENST00000377499	NOL4L	Q96MY1	436 aa	Predicted RBP	10.03	□□□□□ -0.8
LMO7-204	ENST00000377499	C1QTNF5	Q9BXJ0	243 aa		10.03	□□□□□ -0.8
LMO7-204	ENST00000377499	TUBA4B	Q9H853	241 aa		10.03	□□□□□ -0.8
LMO7-204	ENST00000377499	ZNF430	Q9H8G1	570 aa	Predicted RBP	10.03	□□□□□ -0.8
LMO7-204	ENST00000377499	HEATR1	Q9H583	2144 aa	Known RBP	10.03	□□□□□ -0.8
LMO7-204	ENST00000377499		A0A1B0GUH1	482 aa		10.03	□□□□□ -0.8
LMO7-204	ENST00000377499		M0R1B8	84 aa		10.03	□□□□□ -0.8
LMO7-204	ENST00000377499	FGF8	P55075	233 aa	Predicted RBP	10.03	□□□□□ -0.8
LMO7-204	ENST00000377499	SCAND1	P57086	179 aa		10.03	□□□□□ -0.8
LMO7-204	ENST00000377499	PRDX4	Q13162	271 aa		10.03	□□□□□ -0.8
LMO7-204	ENST00000377499	PDCD1	Q15116	288 aa		10.03	□□□□□ -0.8
LMO7-204	ENST00000377499	ZNF343	Q6P1L6	599 aa		10.03	□□□□□ -0.8
LMO7-204	ENST00000377499	ZNF584	Q8IVC4	421 aa		10.03	□□□□□ -0.8
LMO7-204	ENST00000377499	RNF2	Q99496	336 aa		10.03	□□□□□ -0.8
LMO7-204	ENST00000377499	TMPRSS13	Q9BYE2	586 aa		10.03	□□□□□ -0.8
LMO7-204	ENST00000377499	LPAR2	Q9HBW0	351 aa		10.03	□□□□□ -0.8
LMO7-204	ENST00000377499	CAD	P27708	2225 aa		10.02	□□□□□ -0.8
LMO7-204	ENST00000377499	hCG_38984	A0A1B0GV85	526 aa		10.02	□□□□□ -0.8
LMO7-204	ENST00000377499	CD300LB	A8K4G0	201 aa		10.02	□□□□□ -0.8
LMO7-204	ENST00000377499		K7EPK0	472 aa		10.02	□□□□□ -0.8
LMO7-204	ENST00000377499	GEMIN2	O14893	280 aa	Known RBP	10.02	□□□□□ -0.8
LMO7-204	ENST00000377499	CA6	P23280	308 aa		10.02	□□□□□ -0.8
LMO7-204	ENST00000377499	DHODH	Q02127	395 aa		10.02	□□□□□ -0.8
LMO7-204	ENST00000377499	PJVK	Q0ZLH3	352 aa		10.02	□□□□□ -0.8
LMO7-204	ENST00000377499	NKPD1	Q17RQ9	610 aa		10.02	□□□□□ -0.8
LMO7-204	ENST00000377499	SLC25A26	Q70HW3	274 aa		10.02	□□□□□ -0.8
LMO7-204	ENST00000377499	TRAPPC6B	Q86SZ2	158 aa		10.02	□□□□□ -0.8
LMO7-204	ENST00000377499	CMTM1	Q8IZ96	169 aa		10.02	□□□□□ -0.8
LMO7-204	ENST00000377499	FAM71E2	Q8N5Q1	922 aa		10.02	□□□□□ -0.8
LMO7-204	ENST00000377499	OR2AK2	Q8NG84	335 aa		10.02	□□□□□ -0.8
LMO7-204	ENST00000377499	OR51F2	Q8NH61	342 aa		10.02	□□□□□ -0.8
LMO7-204	ENST00000377499	SPSB1	Q96BD6	273 aa		10.02	□□□□□ -0.8
LMO7-204	ENST00000377499	OR2J1	Q9GZK6	312 aa		10.02	□□□□□ -0.8
LMO7-204	ENST00000377499	FAM215A	Q9Y5M1	114 aa		10.02	□□□□□ -0.8
LMO7-204	ENST00000377499	ANKRD20A5P	A0PJZ0	165 aa		10.02	□□□□□ -0.81
LMO7-204	ENST00000377499	TRGC2	P03986	189 aa		10.02	□□□□□ -0.81
LMO7-204	ENST00000377499	PTGER4	P35408	488 aa		10.02	□□□□□ -0.81
LMO7-204	ENST00000377499	UNC119	Q13432	240 aa		10.02	□□□□□ -0.81
LMO7-204	ENST00000377499	TAF9	Q16594	264 aa		10.02	□□□□□ -0.81
LMO7-204	ENST00000377499	MUC20	Q8N307	709 aa	Predicted RBP	10.02	□□□□□ -0.81
LMO7-204	ENST00000377499	DUSP13	Q9UII6	198 aa		10.02	□□□□□ -0.81
LMO7-204	ENST00000377499	SOCS1	O15524	211 aa		10.02	□□□□□ -0.81
LMO7-204	ENST00000377499	CDC14B	O60729	498 aa		10.02	□□□□□ -0.81
LMO7-204	ENST00000377499	SCGB1D1	O95968	90 aa		10.02	□□□□□ -0.81
LMO7-204	ENST00000377499	RIPPLY3	P57055	190 aa		10.02	□□□□□ -0.81
LMO7-204	ENST00000377499	ERVS71-1	P61550	626 aa		10.02	□□□□□ -0.81
LMO7-204	ENST00000377499	PPP1CB	P62140	327 aa		10.02	□□□□□ -0.81
LMO7-204	ENST00000377499	FAM219A	Q8IW50	185 aa		10.02	□□□□□ -0.81
LMO7-204	ENST00000377499	ZDHHC23	Q8IYP9	409 aa		10.02	□□□□□ -0.81
LMO7-204	ENST00000377499	SPIC	Q8N5J4	248 aa		10.02	□□□□□ -0.81
LMO7-204	ENST00000377499	INO80E	Q8NBZ0	244 aa	Predicted RBP	10.02	□□□□□ -0.81
LMO7-204	ENST00000377499	EIF5A2	Q9GZV4	153 aa	Known RBP	10.02	□□□□□ -0.81
LMO7-204	ENST00000377499	PLSCR4	Q9NRQ2	329 aa		10.02	□□□□□ -0.81
LMO7-204	ENST00000377499	PLEKHJ1	Q9NW61	149 aa		10.02	□□□□□ -0.81
LMO7-204	ENST00000377499	ZNF732	B4DXR9	585 aa		10.01	□□□□□ -0.81
LMO7-204	ENST00000377499	TNFSF13	O75888	250 aa		10.01	□□□□□ -0.81
LMO7-204	ENST00000377499	FUT6	P51993	359 aa		10.01	□□□□□ -0.81
LMO7-204	ENST00000377499	FAM166A	Q6J272	317 aa		10.01	□□□□□ -0.81
LMO7-204	ENST00000377499	LHFPL2	Q6ZUX7	228 aa		10.01	□□□□□ -0.81
LMO7-204	ENST00000377499	SEM1	Q6ZVN7	128 aa		10.01	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms