RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 MYEF2Q9P2K5 600 aaKnown RBP3.86□□□□□ -1.79
RNU4-39P-201ENST00000362455 STK38LQ9Y2H1 464 aa3.86□□□□□ -1.79
RNU4-39P-201ENST00000362455 SOX21Q9Y651 276 aaPredicted RBP3.86□□□□□ -1.79
RNU4-39P-201ENST00000362455 C12orf77C9JDV5 145 aa3.85□□□□□ -1.79
RNU4-39P-201ENST00000362455 AZIN1O14977 448 aa3.85□□□□□ -1.79
RNU4-39P-201ENST00000362455 RNF13O43567 381 aa3.85□□□□□ -1.79
RNU4-39P-201ENST00000362455 EIF1BO60739 113 aaKnown RBP3.85□□□□□ -1.79
RNU4-39P-201ENST00000362455 NPIPB7O75200 414 aa3.85□□□□□ -1.79
RNU4-39P-201ENST00000362455 WBP4O75554 376 aaKnown RBP3.85□□□□□ -1.79
RNU4-39P-201ENST00000362455 MSMBP08118 114 aa3.85□□□□□ -1.79
RNU4-39P-201ENST00000362455 GUSBP08236 651 aa3.85□□□□□ -1.79
RNU4-39P-201ENST00000362455 FGF4P08620 206 aa3.85□□□□□ -1.79
RNU4-39P-201ENST00000362455 KRTAP1-4P0C5Y4 121 aa3.85□□□□□ -1.79
RNU4-39P-201ENST00000362455 TROVE2P10155 538 aaKnown RBP eCLIP3.85□□□□□ -1.79
RNU4-39P-201ENST00000362455 CBR1P16152 277 aa3.85□□□□□ -1.79
RNU4-39P-201ENST00000362455 SLC2A5P22732 501 aa3.85□□□□□ -1.79
RNU4-39P-201ENST00000362455 BTCP35070 178 aa3.85□□□□□ -1.79
RNU4-39P-201ENST00000362455 UBA52P62987 128 aaKnown RBP3.85□□□□□ -1.79
RNU4-39P-201ENST00000362455 ERVK-25P63136 954 aa3.85□□□□□ -1.79
RNU4-39P-201ENST00000362455 BNIP2Q12982 314 aa3.85□□□□□ -1.79
RNU4-39P-201ENST00000362455 MAD2L1BPQ15013 274 aaPredicted RBP3.85□□□□□ -1.79
RNU4-39P-201ENST00000362455 XKR7Q5GH72 579 aa3.85□□□□□ -1.79
RNU4-39P-201ENST00000362455 METAP1DQ6UB28 335 aaPredicted RBP3.85□□□□□ -1.79
RNU4-39P-201ENST00000362455 ZCCHC23Q6ZST2 131 aa3.85□□□□□ -1.79
RNU4-39P-201ENST00000362455 AAED1Q7RTV5 226 aa3.85□□□□□ -1.79
RNU4-39P-201ENST00000362455 MDP1Q86V88 176 aa3.85□□□□□ -1.79
RNU4-39P-201ENST00000362455 C10orf107Q8IVU9 208 aa3.85□□□□□ -1.79
RNU4-39P-201ENST00000362455 OR4F15Q8NGB8 312 aa3.85□□□□□ -1.79
RNU4-39P-201ENST00000362455 SFXN5Q8TD22 340 aa3.85□□□□□ -1.79
RNU4-39P-201ENST00000362455 ZNF418Q8TF45 676 aaPredicted RBP3.85□□□□□ -1.79
RNU4-39P-201ENST00000362455 TMEM234Q8WY98 164 aa3.85□□□□□ -1.79
RNU4-39P-201ENST00000362455 SORT1Q99523 831 aa3.85□□□□□ -1.79
RNU4-39P-201ENST00000362455 C1orf50Q9BV19 199 aa3.85□□□□□ -1.79
RNU4-39P-201ENST00000362455 SLC38A1Q9H2H9 487 aa3.85□□□□□ -1.79
RNU4-39P-201ENST00000362455 OR51I1Q9H343 314 aa3.85□□□□□ -1.79
RNU4-39P-201ENST00000362455 SIAEQ9HAT2 523 aa3.85□□□□□ -1.79
RNU4-39P-201ENST00000362455 STARD10Q9Y365 291 aa3.85□□□□□ -1.79
RNU4-39P-201ENST00000362455 FIS1Q9Y3D6 152 aa3.85□□□□□ -1.79
RNU4-39P-201ENST00000362455 CACNG2Q9Y698 323 aa3.85□□□□□ -1.79
RNU4-39P-201ENST00000362455 ARFGEF3Q5TH69 2177 aa3.85□□□□□ -1.79
RNU4-39P-201ENST00000362455 AGRNO00468 2067 aa3.84□□□□□ -1.79
RNU4-39P-201ENST00000362455 EXOC1LA0A1B0GW35 172 aa3.84□□□□□ -1.79
RNU4-39P-201ENST00000362455 KLLNB2CW77 178 aa3.84□□□□□ -1.79
RNU4-39P-201ENST00000362455 FTCDNL1E5RQL4 147 aa3.84□□□□□ -1.79
RNU4-39P-201ENST00000362455 RPL36A-HNRNPH2H7BZ11 118 aa3.84□□□□□ -1.79
RNU4-39P-201ENST00000362455 HMGN4O00479 90 aa3.84□□□□□ -1.79
RNU4-39P-201ENST00000362455 GOSR2O14653 212 aa3.84□□□□□ -1.79
RNU4-39P-201ENST00000362455 IGHV2-5P01817 119 aa3.84□□□□□ -1.79
RNU4-39P-201ENST00000362455 HLA-HP01893 362 aa3.84□□□□□ -1.79
RNU4-39P-201ENST00000362455 GKN3PP0CG01 181 aa3.84□□□□□ -1.79
RNU4-39P-201ENST00000362455 CHTF8P0CG12 524 aa3.84□□□□□ -1.79
RNU4-39P-201ENST00000362455 MYL2P10916 166 aa3.84□□□□□ -1.79
RNU4-39P-201ENST00000362455 ZNF35P13682 527 aa3.84□□□□□ -1.79
RNU4-39P-201ENST00000362455 ZNF14P17017 642 aaPredicted RBP3.84□□□□□ -1.79
RNU4-39P-201ENST00000362455 IFNA8P32881 189 aa3.84□□□□□ -1.79
RNU4-39P-201ENST00000362455 GPR6P46095 362 aaPredicted RBP3.84□□□□□ -1.79
RNU4-39P-201ENST00000362455 TMEM33P57088 247 aa3.84□□□□□ -1.79
RNU4-39P-201ENST00000362455 SLC35A1P78382 337 aa3.84□□□□□ -1.79
RNU4-39P-201ENST00000362455 OR7A5Q15622 319 aa3.84□□□□□ -1.79
RNU4-39P-201ENST00000362455 SPRNQ5BIV9 151 aa3.84□□□□□ -1.79
RNU4-39P-201ENST00000362455 TMEM255AQ5JRV8 349 aa3.84□□□□□ -1.79
RNU4-39P-201ENST00000362455 SAXO2Q658L1 398 aa3.84□□□□□ -1.79
RNU4-39P-201ENST00000362455 CTRB2Q6GPI1 263 aa3.84□□□□□ -1.79
RNU4-39P-201ENST00000362455 TNFAIP8L2Q6P589 184 aaPredicted RBP3.84□□□□□ -1.79
RNU4-39P-201ENST00000362455 RIBC1Q8N443 379 aaPredicted RBP3.84□□□□□ -1.79
RNU4-39P-201ENST00000362455 SIGLECL1Q8N7X8 197 aa3.84□□□□□ -1.79
RNU4-39P-201ENST00000362455 OR51F2Q8NH61 342 aa3.84□□□□□ -1.79
RNU4-39P-201ENST00000362455 ZNF563Q8TA94 476 aa3.84□□□□□ -1.79
RNU4-39P-201ENST00000362455 PLPPR1Q8TBJ4 325 aa3.84□□□□□ -1.79
RNU4-39P-201ENST00000362455 ACMSDQ8TDX5 336 aa3.84□□□□□ -1.79
RNU4-39P-201ENST00000362455 TWIST2Q8WVJ9 160 aa3.84□□□□□ -1.79
RNU4-39P-201ENST00000362455 IFT81Q8WYA0 676 aa3.84□□□□□ -1.79
RNU4-39P-201ENST00000362455 RDH5Q92781 318 aa3.84□□□□□ -1.79
RNU4-39P-201ENST00000362455 ROPN1LQ96C74 230 aa3.84□□□□□ -1.79
RNU4-39P-201ENST00000362455 ZHX1-C8orf76Q96EF9 292 aa3.84□□□□□ -1.79
RNU4-39P-201ENST00000362455 TMEM59Q9BXS4 323 aa3.84□□□□□ -1.79
RNU4-39P-201ENST00000362455 FAM192AQ9GZU8 254 aa3.84□□□□□ -1.79
RNU4-39P-201ENST00000362455 IQCGQ9H095 443 aaKnown RBP3.84□□□□□ -1.79
RNU4-39P-201ENST00000362455 RANBP3Q9H6Z4 567 aaPredicted RBP3.84□□□□□ -1.79
RNU4-39P-201ENST00000362455 INPP5EQ9NRR6 644 aa3.84□□□□□ -1.79
RNU4-39P-201ENST00000362455 CALYQ9NYX4 217 aa3.84□□□□□ -1.79
RNU4-39P-201ENST00000362455 ZNF256Q9Y2P7 627 aaPredicted RBP3.84□□□□□ -1.79
RNU4-39P-201ENST00000362455 TMED5Q9Y3A6 229 aa3.84□□□□□ -1.79
RNU4-39P-201ENST00000362455 DNAH3Q8TD57 4116 aa3.84□□□□□ -1.79
RNU4-39P-201ENST00000362455 KRTAP4-16G5E9R7 235 aaPredicted RBP3.83□□□□□ -1.8
RNU4-39P-201ENST00000362455 H3BQF6 201 aa3.83□□□□□ -1.8
RNU4-39P-201ENST00000362455 FAAHO00519 579 aa3.83□□□□□ -1.8
RNU4-39P-201ENST00000362455 IGLV1-47P01700 117 aa3.83□□□□□ -1.8
RNU4-39P-201ENST00000362455 SHBGP04278 402 aa3.83□□□□□ -1.8
RNU4-39P-201ENST00000362455 KRT16P08779 473 aa3.83□□□□□ -1.8
RNU4-39P-201ENST00000362455 NEFHP12036 1026 aa3.83□□□□□ -1.8
RNU4-39P-201ENST00000362455 RPS4Y1P22090 263 aaKnown RBP3.83□□□□□ -1.8
RNU4-39P-201ENST00000362455 FKBP2P26885 142 aaKnown RBP3.83□□□□□ -1.8
RNU4-39P-201ENST00000362455 EVX1P49640 407 aa3.83□□□□□ -1.8
RNU4-39P-201ENST00000362455 POLR2HP52434 150 aaKnown RBP3.83□□□□□ -1.8
RNU4-39P-201ENST00000362455 AQP5P55064 265 aa3.83□□□□□ -1.8
RNU4-39P-201ENST00000362455 CLDN8P56748 225 aa3.83□□□□□ -1.8
RNU4-39P-201ENST00000362455 KRTAP10-3P60369 221 aa3.83□□□□□ -1.8
RNU4-39P-201ENST00000362455 UBE2NP61088 152 aaKnown RBP3.83□□□□□ -1.8
RNU4-39P-201ENST00000362455 ERVS71-1P61550 626 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms