RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 FUT6P51993 359 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 VGLL4Q14135 290 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 KCNAB1Q14722 419 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 IBA57Q5T440 356 aaKnown RBP5.49□□□□□ -1.53
VCAN-203ENST00000343200 OR10V1Q8NGI7 309 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 GRAMD2BQ96HH9 432 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 ZNF257Q9Y2Q1 563 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 MED19A0JLT2 244 aaPredicted RBP5.49□□□□□ -1.53
VCAN-203ENST00000343200 DSCR3O14972 297 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 HPRT1P00492 218 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 CLDN15P56746 228 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 ACER2Q5QJU3 275 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 TPTE2P1Q5T6R2 138 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 CMTM8Q8IZV2 173 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 ZNF511Q8NB15 262 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 HHIPQ96QV1 700 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 PBOV1Q9GZY1 135 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 IGLV3-22A0A075B6J6 115 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 TMEM30CPA0ZSE6 113 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 MEX3AA1L020 520 aaKnown RBP5.48□□□□□ -1.53
VCAN-203ENST00000343200 HIST1H1AQ02539 215 aaPredicted RBP5.48□□□□□ -1.53
VCAN-203ENST00000343200 C19orf54Q5BKX5 351 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 H1FXQ92522 213 aaKnown RBP5.48□□□□□ -1.53
VCAN-203ENST00000343200 TIMD4Q96H15 378 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 ATOH8Q96SQ7 321 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 FOXC2Q99958 501 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 KCNMB2Q9Y691 235 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 PPP1R17O96001 155 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 FAM157CP0CG43 387 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 PCMT1P22061 227 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 TNFSF10P50591 281 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 ZNF121P58317 390 aaPredicted RBP5.48□□□□□ -1.53
VCAN-203ENST00000343200 TMEM99Q8N816 258 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 BHLHE23Q8NDY6 225 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 QTRT1Q9BXR0 403 aaKnown RBP5.48□□□□□ -1.53
VCAN-203ENST00000343200 EPHX3Q9H6B9 360 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 OR51B2Q9Y5P1 312 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 C7orf71A4D174 169 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 PRSS37A4D1T9 235 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 ERVH48-1M5A8F1 160 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 UBE2L6O14933 153 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 ALOX12BO75342 701 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 NMBP08949 121 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 TIMM23BQ5SRD1 257 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 VKORC1L1Q8N0U8 176 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 MRPL30Q8TCC3 161 aaKnown RBP5.48□□□□□ -1.53
VCAN-203ENST00000343200 RHBDD1Q8TEB9 315 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 TMEM45BQ96B21 275 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 S1PR5Q9H228 398 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 DHCR7Q9UBM7 475 aaKnown RBP5.48□□□□□ -1.53
VCAN-203ENST00000343200 HMGN4O00479 90 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 ZFAND5O76080 213 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 CCL23P55773 120 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 TCEAL8Q8IYN2 117 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 OR10AC1Q8NH08 325 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 GTSF1LQ9H1H1 148 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 UBE2ZQ9H832 354 aaPredicted RBP5.48□□□□□ -1.53
VCAN-203ENST00000343200 LAMTOR2Q9Y2Q5 125 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 TMEM189A5PLL7 270 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 OR11H12B2RN74 326 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 GCM2O75603 506 aaPredicted RBP5.48□□□□□ -1.53
VCAN-203ENST00000343200 RAC3P60763 192 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 CLDN10P78369 228 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 PAPPA-AS1Q5QFB9 102 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 WDR25Q64LD2 544 aaPredicted RBP5.48□□□□□ -1.53
VCAN-203ENST00000343200 WDR31Q8NA23 367 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 OR11H1Q8NG94 326 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 OR4X2Q8NGF9 303 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 OR11H2Q8NH07 326 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 OR51E1Q8TCB6 317 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 PDXPQ96GD0 296 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 AQP10Q96PS8 301 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 V9GYH0 126 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 PCSK5Q92824 1860 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 BCAT2O15382 392 aaPredicted RBP5.48□□□□□ -1.53
VCAN-203ENST00000343200 DUSP3P51452 185 aaPredicted RBP5.48□□□□□ -1.53
VCAN-203ENST00000343200 SSR4P51571 173 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 NUTF2P61970 127 aaKnown RBP5.48□□□□□ -1.53
VCAN-203ENST00000343200 IER5LQ5T953 404 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 GPRIN1Q7Z2K8 1008 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 CBARPQ8N350 705 aaPredicted RBP5.48□□□□□ -1.53
VCAN-203ENST00000343200 OR1N1Q8NGS0 311 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.48□□□□□ -1.53
VCAN-203ENST00000343200 FLYWCH2Q96CP2 140 aaKnown RBP5.48□□□□□ -1.53
VCAN-203ENST00000343200 SLC25A2Q9BXI2 301 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 C19orf53Q9UNZ5 99 aaPredicted RBP5.48□□□□□ -1.53
VCAN-203ENST00000343200 FAM72CH0Y354 149 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 GRPP07492 148 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 CD68P34810 354 aaPredicted RBP5.48□□□□□ -1.53
VCAN-203ENST00000343200 HIKESHIQ53FT3 197 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 FAM27D1Q5T7N8 215 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 FAM72AQ5TYM5 149 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 FAM72DQ6L9T8 149 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 FAM72BQ86X60 149 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 RIMKLAQ8IXN7 391 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 OR4D5Q8NGN0 318 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 ABHD3Q8WU67 409 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 A0A087WWC5 75 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 HCRTR1O43613 425 aa5.48□□□□□ -1.53
VCAN-203ENST00000343200 FGF18O76093 207 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms