RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 C15orf65H3BRN8 121 aa14.12□□□□□ -0.15
HDDC3-201ENST00000330334 CASQ2O14958 399 aaPredicted RBP14.12□□□□□ -0.15
HDDC3-201ENST00000330334 ORC5O43913 435 aa14.12□□□□□ -0.15
HDDC3-201ENST00000330334 MT-ND4P03905 459 aa14.12□□□□□ -0.15
HDDC3-201ENST00000330334 GNAO1P09471 354 aa14.12□□□□□ -0.15
HDDC3-201ENST00000330334 SERPINA2P20848 420 aa14.12□□□□□ -0.15
HDDC3-201ENST00000330334 Q3ZCU0 254 aa14.12□□□□□ -0.15
HDDC3-201ENST00000330334 SLC22A6Q4U2R8 563 aa14.12□□□□□ -0.15
HDDC3-201ENST00000330334 TCTEX1D4Q5JR98 221 aa14.12□□□□□ -0.15
HDDC3-201ENST00000330334 OGFRL1Q5TC84 451 aaPredicted RBP14.12□□□□□ -0.15
HDDC3-201ENST00000330334 LAIR2Q6ISS4 152 aa14.12□□□□□ -0.15
HDDC3-201ENST00000330334 ZNF497Q6ZNH5 498 aa14.12□□□□□ -0.15
HDDC3-201ENST00000330334 LINC00311Q8N616 119 aa14.12□□□□□ -0.15
HDDC3-201ENST00000330334 THRSPQ92748 146 aa14.12□□□□□ -0.15
HDDC3-201ENST00000330334 LEAP2Q969E1 77 aa14.12□□□□□ -0.15
HDDC3-201ENST00000330334 RCC2Q9P258 522 aaKnown RBP14.12□□□□□ -0.15
HDDC3-201ENST00000330334 MOB4Q9Y3A3 225 aa14.12□□□□□ -0.15
HDDC3-201ENST00000330334 TSSC4Q9Y5U2 329 aaPredicted RBP14.12□□□□□ -0.15
HDDC3-201ENST00000330334 ZNF816Q0VGE8 651 aaPredicted RBP14.11□□□□□ -0.15
HDDC3-201ENST00000330334 DOC2BQ14184 412 aa14.11□□□□□ -0.15
HDDC3-201ENST00000330334 EBI3Q14213 229 aa14.11□□□□□ -0.15
HDDC3-201ENST00000330334 LYPD6Q86Y78 171 aa14.11□□□□□ -0.15
HDDC3-201ENST00000330334 DRAM1Q8N682 238 aa14.11□□□□□ -0.15
HDDC3-201ENST00000330334 ZFP41Q8N8Y5 198 aa14.11□□□□□ -0.15
HDDC3-201ENST00000330334 OR10X1Q8NGY0 326 aa14.11□□□□□ -0.15
HDDC3-201ENST00000330334 OR56B4Q8NH76 319 aa14.11□□□□□ -0.15
HDDC3-201ENST00000330334 OR14A2Q96R54 314 aa14.11□□□□□ -0.15
HDDC3-201ENST00000330334 TRAV39A0A0B4J263 110 aa14.1□□□□□ -0.15
HDDC3-201ENST00000330334 TCRBV4S1A1TA0A5B7 111 aa14.1□□□□□ -0.15
HDDC3-201ENST00000330334 MAGEA13PA6NCF6 341 aa14.1□□□□□ -0.15
HDDC3-201ENST00000330334 FAM90A10PA6NDY2 464 aa14.1□□□□□ -0.15
HDDC3-201ENST00000330334 FAM90A7PA6NKC0 464 aa14.1□□□□□ -0.15
HDDC3-201ENST00000330334 FAM90A23PA8MXZ1 464 aa14.1□□□□□ -0.15
HDDC3-201ENST00000330334 FGF16O43320 207 aa14.1□□□□□ -0.15
HDDC3-201ENST00000330334 IGHV3-7P01780 117 aa14.1□□□□□ -0.15
HDDC3-201ENST00000330334 GLAP06280 429 aa14.1□□□□□ -0.15
HDDC3-201ENST00000330334 SNRNP70P08621 437 aaKnown RBP14.1□□□□□ -0.15
HDDC3-201ENST00000330334 CELP19835 753 aa14.1□□□□□ -0.15
HDDC3-201ENST00000330334 WNT4P56705 351 aa14.1□□□□□ -0.15
HDDC3-201ENST00000330334 LOXL3P58215 753 aa14.1□□□□□ -0.15
HDDC3-201ENST00000330334 TMEM30BQ3MIR4 351 aa14.1□□□□□ -0.15
HDDC3-201ENST00000330334 ATAD3CQ5T2N8 411 aa14.1□□□□□ -0.15
HDDC3-201ENST00000330334 RNLSQ5VYX0 342 aa14.1□□□□□ -0.15
HDDC3-201ENST00000330334 GAPTQ8N292 157 aa14.1□□□□□ -0.15
HDDC3-201ENST00000330334 STX19Q8N4C7 294 aa14.1□□□□□ -0.15
HDDC3-201ENST00000330334 NANOGP1Q8N7R0 232 aa14.1□□□□□ -0.15
HDDC3-201ENST00000330334 OR4X2Q8NGF9 303 aa14.1□□□□□ -0.15
HDDC3-201ENST00000330334 ARL11Q969Q4 196 aa14.1□□□□□ -0.15
HDDC3-201ENST00000330334 DERL3Q96Q80 235 aa14.1□□□□□ -0.15
HDDC3-201ENST00000330334 RAB9BQ9NP90 201 aa14.1□□□□□ -0.15
HDDC3-201ENST00000330334 FKBP14Q9NWM8 211 aa14.1□□□□□ -0.15
HDDC3-201ENST00000330334 MRPS28Q9Y2Q9 187 aaKnown RBP14.1□□□□□ -0.15
HDDC3-201ENST00000330334 A0A1W2PP11 408 aa14.09□□□□□ -0.15
HDDC3-201ENST00000330334 MCRIP1C9JLW8 97 aa14.09□□□□□ -0.15
HDDC3-201ENST00000330334 CCRL2O00421 344 aa14.09□□□□□ -0.15
HDDC3-201ENST00000330334 CA11O75493 328 aa14.09□□□□□ -0.15
HDDC3-201ENST00000330334 GAPDHP04406 335 aaKnown RBP14.09□□□□□ -0.15
HDDC3-201ENST00000330334 MAPK3P27361 379 aaPredicted RBP14.09□□□□□ -0.15
HDDC3-201ENST00000330334 GNG10P50151 68 aa14.09□□□□□ -0.15
HDDC3-201ENST00000330334 DIAPH2-AS1Q14236 149 aa14.09□□□□□ -0.15
HDDC3-201ENST00000330334 LTC4SQ16873 150 aa14.09□□□□□ -0.15
HDDC3-201ENST00000330334 OXLD1Q5BKU9 147 aa14.09□□□□□ -0.15
HDDC3-201ENST00000330334 GLIPR1L1Q6UWM5 242 aa14.09□□□□□ -0.15
HDDC3-201ENST00000330334 JAGN1Q8N5M9 183 aa14.09□□□□□ -0.15
HDDC3-201ENST00000330334 NKAIN3Q8N8D7 197 aa14.09□□□□□ -0.15
HDDC3-201ENST00000330334 TFAP2CQ92754 450 aa14.09□□□□□ -0.15
HDDC3-201ENST00000330334 MYDGFQ969H8 173 aa14.09□□□□□ -0.15
HDDC3-201ENST00000330334 MUL1Q969V5 352 aa14.09□□□□□ -0.15
HDDC3-201ENST00000330334 UQCC2Q9BRT2 126 aa14.09□□□□□ -0.15
HDDC3-201ENST00000330334 GFOD1Q9NXC2 390 aa14.09□□□□□ -0.15
HDDC3-201ENST00000330334 GHRLQ9UBU3 117 aa14.09□□□□□ -0.15
HDDC3-201ENST00000330334 ERGIC3Q9Y282 383 aa14.09□□□□□ -0.15
HDDC3-201ENST00000330334 A0A1W2PPK0 400 aa14.08□□□□□ -0.16
HDDC3-201ENST00000330334 AIPO00170 330 aa14.08□□□□□ -0.16
HDDC3-201ENST00000330334 SDCBPO00560 298 aaPredicted RBP14.08□□□□□ -0.16
HDDC3-201ENST00000330334 MYL12BO14950 172 aa14.08□□□□□ -0.16
HDDC3-201ENST00000330334 PIN1P1O15428 100 aa14.08□□□□□ -0.16
HDDC3-201ENST00000330334 TMEM11P17152 192 aa14.08□□□□□ -0.16
HDDC3-201ENST00000330334 STEAP3Q658P3 488 aa14.08□□□□□ -0.16
HDDC3-201ENST00000330334 AHSA2Q719I0 299 aa14.08□□□□□ -0.16
HDDC3-201ENST00000330334 C5orf56Q8N8D9 126 aa14.08□□□□□ -0.16
HDDC3-201ENST00000330334 BPIFB6Q8NFQ5 453 aa14.08□□□□□ -0.16
HDDC3-201ENST00000330334 NEK7Q8TDX7 302 aa14.08□□□□□ -0.16
HDDC3-201ENST00000330334 ST6GALNAC6Q969X2 333 aa14.08□□□□□ -0.16
HDDC3-201ENST00000330334 VCXQ9H320 206 aa14.08□□□□□ -0.16
HDDC3-201ENST00000330334 IGHV1-3A0A0C4DH29 117 aa14.07□□□□□ -0.16
HDDC3-201ENST00000330334 HSD17B6O14756 317 aa14.07□□□□□ -0.16
HDDC3-201ENST00000330334 SC5DO75845 299 aa14.07□□□□□ -0.16
HDDC3-201ENST00000330334 MAS1P04201 325 aa14.07□□□□□ -0.16
HDDC3-201ENST00000330334 HES1Q14469 280 aa14.07□□□□□ -0.16
HDDC3-201ENST00000330334 AWAT2Q6E213 333 aa14.07□□□□□ -0.16
HDDC3-201ENST00000330334 RAB12Q6IQ22 244 aa14.07□□□□□ -0.16
HDDC3-201ENST00000330334 TRAT1Q6PIZ9 186 aa14.07□□□□□ -0.16
HDDC3-201ENST00000330334 IZUMO1Q8IYV9 350 aa14.07□□□□□ -0.16
HDDC3-201ENST00000330334 MS4A15Q8N5U1 240 aa14.07□□□□□ -0.16
HDDC3-201ENST00000330334 CCDC107Q8WV48 283 aa14.07□□□□□ -0.16
HDDC3-201ENST00000330334 NECAP2Q9NVZ3 263 aa14.07□□□□□ -0.16
HDDC3-201ENST00000330334 A0A1W2PRX2 142 aa14.06□□□□□ -0.16
HDDC3-201ENST00000330334 SH2D7A6NKC9 451 aaPredicted RBP14.06□□□□□ -0.16
HDDC3-201ENST00000330334 SPINT2O43291 252 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms