RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 POLEQ07864 2286 aa13.79□□□□□ -0.2
PRPF40B-201ENST00000261897 BLKP51451 505 aa13.78□□□□□ -0.2
PRPF40B-201ENST00000261897 GRB2P62993 217 aaKnown RBP13.78□□□□□ -0.2
PRPF40B-201ENST00000261897 LBHQ53QV2 105 aaPredicted RBP13.78□□□□□ -0.2
PRPF40B-201ENST00000261897 ZNF506Q5JVG8 444 aa13.78□□□□□ -0.2
PRPF40B-201ENST00000261897 DIRC2Q96SL1 478 aa13.78□□□□□ -0.2
PRPF40B-201ENST00000261897 A0A1B0GU03 582 aa13.78□□□□□ -0.2
PRPF40B-201ENST00000261897 PITX3O75364 302 aa13.78□□□□□ -0.2
PRPF40B-201ENST00000261897 SFTPCP11686 197 aa13.78□□□□□ -0.2
PRPF40B-201ENST00000261897 SELEP16581 610 aa13.78□□□□□ -0.2
PRPF40B-201ENST00000261897 CNN1P51911 297 aaKnown RBP13.78□□□□□ -0.2
PRPF40B-201ENST00000261897 TAS2R30P59541 319 aa13.78□□□□□ -0.2
PRPF40B-201ENST00000261897 LTC4SQ16873 150 aa13.78□□□□□ -0.2
PRPF40B-201ENST00000261897 OR10V1Q8NGI7 309 aa13.78□□□□□ -0.2
PRPF40B-201ENST00000261897 C1orf147Q96MC9 270 aaPredicted RBP13.78□□□□□ -0.2
PRPF40B-201ENST00000261897 DNAJC4Q9NNZ3 241 aa13.78□□□□□ -0.2
PRPF40B-201ENST00000261897 USF3Q68DE3 2245 aa13.78□□□□□ -0.2
PRPF40B-201ENST00000261897 LOC102723971A0A1B0GUV8 181 aa13.78□□□□□ -0.2
PRPF40B-201ENST00000261897 ZNF814B7Z6K7 855 aa13.78□□□□□ -0.2
PRPF40B-201ENST00000261897 TRDCB7Z8K6 153 aa13.78□□□□□ -0.2
PRPF40B-201ENST00000261897 NUBP1P53384 320 aa13.78□□□□□ -0.2
PRPF40B-201ENST00000261897 SUCLG1P53597 346 aaKnown RBP13.78□□□□□ -0.2
PRPF40B-201ENST00000261897 FNDC7Q5VTL7 733 aa13.78□□□□□ -0.2
PRPF40B-201ENST00000261897 VASH2Q86V25 355 aa13.78□□□□□ -0.2
PRPF40B-201ENST00000261897 ZNF808Q8N4W9 903 aaPredicted RBP13.78□□□□□ -0.2
PRPF40B-201ENST00000261897 CMTM2Q8TAZ6 248 aa13.78□□□□□ -0.2
PRPF40B-201ENST00000261897 ZNF721Q8TF20 911 aa13.78□□□□□ -0.2
PRPF40B-201ENST00000261897 RCC1LQ96I51 464 aaKnown RBP13.78□□□□□ -0.2
PRPF40B-201ENST00000261897 UCN2Q96RP3 112 aa13.78□□□□□ -0.2
PRPF40B-201ENST00000261897 MOB1AQ9H8S9 216 aa13.78□□□□□ -0.2
PRPF40B-201ENST00000261897 NUP210Q8TEM1 1887 aaPredicted RBP13.77□□□□□ -0.2
PRPF40B-201ENST00000261897 KRASP01116 189 aa13.77□□□□□ -0.2
PRPF40B-201ENST00000261897 OR56B2PQ8NGI1 322 aa13.77□□□□□ -0.2
PRPF40B-201ENST00000261897 DEFB126Q9BYW3 111 aa13.77□□□□□ -0.2
PRPF40B-201ENST00000261897 ALKBH4Q9NXW9 302 aa13.77□□□□□ -0.2
PRPF40B-201ENST00000261897 NAT8Q9UHE5 227 aa13.77□□□□□ -0.2
PRPF40B-201ENST00000261897 VAX2Q9UIW0 290 aa13.77□□□□□ -0.2
PRPF40B-201ENST00000261897 LIPT2A6NK58 231 aa13.77□□□□□ -0.21
PRPF40B-201ENST00000261897 KIAA1324LA8MWY0 1029 aaPredicted RBP13.77□□□□□ -0.21
PRPF40B-201ENST00000261897 PNRC1Q12796 327 aaPredicted RBP13.77□□□□□ -0.21
PRPF40B-201ENST00000261897 D2HGDHQ8N465 521 aa13.77□□□□□ -0.21
PRPF40B-201ENST00000261897 OR51G1Q8NGK1 321 aa13.77□□□□□ -0.21
PRPF40B-201ENST00000261897 ADGRG7Q96K78 797 aa13.77□□□□□ -0.21
PRPF40B-201ENST00000261897 NEU1Q99519 415 aa13.77□□□□□ -0.21
PRPF40B-201ENST00000261897 FAM234AQ9H0X4 552 aa13.77□□□□□ -0.21
PRPF40B-201ENST00000261897 SERTAD4Q9NUC0 356 aa13.77□□□□□ -0.21
PRPF40B-201ENST00000261897 TMEM50AO95807 157 aa13.77□□□□□ -0.21
PRPF40B-201ENST00000261897 NPBWR2P48146 333 aa13.77□□□□□ -0.21
PRPF40B-201ENST00000261897 ERVFC1-1P60608 527 aa13.77□□□□□ -0.21
PRPF40B-201ENST00000261897 HNRNPKP61978 463 aaKnown RBP eCLIP13.77□□□□□ -0.21
PRPF40B-201ENST00000261897 HBG1P69891 147 aa13.77□□□□□ -0.21
PRPF40B-201ENST00000261897 HBG2P69892 147 aa13.77□□□□□ -0.21
PRPF40B-201ENST00000261897 ZNF90Q03938 601 aa13.77□□□□□ -0.21
PRPF40B-201ENST00000261897 CNN3Q15417 329 aaKnown RBP13.77□□□□□ -0.21
PRPF40B-201ENST00000261897 Q6ZVH6 145 aa13.77□□□□□ -0.21
PRPF40B-201ENST00000261897 ARV1Q9H2C2 271 aa13.77□□□□□ -0.21
PRPF40B-201ENST00000261897 C20orf202A1L168 122 aa13.76□□□□□ -0.21
PRPF40B-201ENST00000261897 H0Y8G0 127 aa13.76□□□□□ -0.21
PRPF40B-201ENST00000261897 MDH2P40926 338 aaKnown RBP13.76□□□□□ -0.21
PRPF40B-201ENST00000261897 RABIFP47224 123 aa13.76□□□□□ -0.21
PRPF40B-201ENST00000261897 FASLGP48023 281 aa13.76□□□□□ -0.21
PRPF40B-201ENST00000261897 COTL1Q14019 142 aa13.76□□□□□ -0.21
PRPF40B-201ENST00000261897 KIAA1644Q3SXP7 199 aa13.76□□□□□ -0.21
PRPF40B-201ENST00000261897 ZNF818PQ6ZRF7 136 aa13.76□□□□□ -0.21
PRPF40B-201ENST00000261897 SLC22A18ASQ8N1D0 253 aa13.76□□□□□ -0.21
PRPF40B-201ENST00000261897 OR5R1Q8NH85 324 aa13.76□□□□□ -0.21
PRPF40B-201ENST00000261897 IFI44Q8TCB0 444 aa13.76□□□□□ -0.21
PRPF40B-201ENST00000261897 ADIPOR1Q96A54 375 aa13.76□□□□□ -0.21
PRPF40B-201ENST00000261897 ZNF385AQ96PM9 386 aaKnown RBP13.76□□□□□ -0.21
PRPF40B-201ENST00000261897 RIMS4Q9H426 269 aaPredicted RBP13.76□□□□□ -0.21
PRPF40B-201ENST00000261897 CLEC18AA5D8T8 446 aa13.76□□□□□ -0.21
PRPF40B-201ENST00000261897 OR6C6A6NF89 314 aa13.76□□□□□ -0.21
PRPF40B-201ENST00000261897 DLEU1O43261 78 aa13.76□□□□□ -0.21
PRPF40B-201ENST00000261897 GCGP01275 180 aa13.76□□□□□ -0.21
PRPF40B-201ENST00000261897 PSG2P11465 335 aa13.76□□□□□ -0.21
PRPF40B-201ENST00000261897 ZNF468Q5VIY5 522 aaPredicted RBP13.76□□□□□ -0.21
PRPF40B-201ENST00000261897 ZDHHC23Q8IYP9 409 aa13.76□□□□□ -0.21
PRPF40B-201ENST00000261897 CLEC18CQ8NCF0 446 aa13.76□□□□□ -0.21
PRPF40B-201ENST00000261897 OR5D13Q8NGL4 314 aa13.76□□□□□ -0.21
PRPF40B-201ENST00000261897 MSI2Q96DH6 328 aaKnown RBP13.76□□□□□ -0.21
PRPF40B-201ENST00000261897 CIB3Q96Q77 187 aaPredicted RBP13.76□□□□□ -0.21
PRPF40B-201ENST00000261897 SDF2L1Q9HCN8 221 aa13.76□□□□□ -0.21
PRPF40B-201ENST00000261897 FGF21Q9NSA1 209 aa13.76□□□□□ -0.21
PRPF40B-201ENST00000261897 LYRM2Q9NU23 88 aaPredicted RBP13.76□□□□□ -0.21
PRPF40B-201ENST00000261897 SRSF10O75494 262 aaKnown RBP13.76□□□□□ -0.21
PRPF40B-201ENST00000261897 GYPAP02724 150 aa13.76□□□□□ -0.21
PRPF40B-201ENST00000261897 DTYMKP23919 212 aa13.76□□□□□ -0.21
PRPF40B-201ENST00000261897 DCAF7P61962 342 aa13.76□□□□□ -0.21
PRPF40B-201ENST00000261897 ZNF837Q96EG3 531 aaPredicted RBP13.76□□□□□ -0.21
PRPF40B-201ENST00000261897 SCRT1Q9BWW7 348 aa13.76□□□□□ -0.21
PRPF40B-201ENST00000261897 HINT2Q9BX68 163 aa13.76□□□□□ -0.21
PRPF40B-201ENST00000261897 PARLQ9H300 379 aa13.76□□□□□ -0.21
PRPF40B-201ENST00000261897 SRD5A3Q9H8P0 318 aa13.76□□□□□ -0.21
PRPF40B-201ENST00000261897 GCM1Q9NP62 436 aa13.76□□□□□ -0.21
PRPF40B-201ENST00000261897 A0A087WWC5 75 aa13.75□□□□□ -0.21
PRPF40B-201ENST00000261897 MDFIC2A0A1B0GVS7 189 aa13.75□□□□□ -0.21
PRPF40B-201ENST00000261897 A0A1W2PPV4 95 aa13.75□□□□□ -0.21
PRPF40B-201ENST00000261897 MARCH11A6NNE9 402 aa13.75□□□□□ -0.21
PRPF40B-201ENST00000261897 B4DEV8 164 aa13.75□□□□□ -0.21
PRPF40B-201ENST00000261897 HINT1P49773 126 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms