RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, human

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDHD-209	ENST00000640554	LIAT1	Q6ZQX7	453 aa		11.59	□□□□□ -0.55
SDHD-209	ENST00000640554	LRRTM1	Q86UE6	522 aa		11.59	□□□□□ -0.55
SDHD-209	ENST00000640554	KCNG3	Q8TAE7	436 aa		11.59	□□□□□ -0.55
SDHD-209	ENST00000640554	FCGR1B	Q92637	280 aa		11.59	□□□□□ -0.55
SDHD-209	ENST00000640554	TMEM203	Q969S6	136 aa		11.59	□□□□□ -0.55
SDHD-209	ENST00000640554	SSX3	Q99909	188 aa		11.59	□□□□□ -0.55
SDHD-209	ENST00000640554	RAB18	Q9NP72	206 aa		11.59	□□□□□ -0.55
SDHD-209	ENST00000640554	KIF25	Q9UIL4	384 aa		11.59	□□□□□ -0.55
SDHD-209	ENST00000640554		A0A087X0M5	115 aa		11.58	□□□□□ -0.56
SDHD-209	ENST00000640554	IGHV2-26	A0A0B4J1V2	119 aa		11.58	□□□□□ -0.56
SDHD-209	ENST00000640554		A0A1B0GX30	115 aa		11.58	□□□□□ -0.56
SDHD-209	ENST00000640554	TMEM30CP	A0ZSE6	113 aa		11.58	□□□□□ -0.56
SDHD-209	ENST00000640554	GPR137B	O60478	399 aa		11.58	□□□□□ -0.56
SDHD-209	ENST00000640554	CRTAP	O75718	401 aa	Predicted RBP	11.58	□□□□□ -0.56
SDHD-209	ENST00000640554	BPNT1	O95861	308 aa		11.58	□□□□□ -0.56
SDHD-209	ENST00000640554	MGMT	P16455	207 aa		11.58	□□□□□ -0.56
SDHD-209	ENST00000640554	FUT3	P21217	361 aa		11.58	□□□□□ -0.56
SDHD-209	ENST00000640554	MAP2K4	P45985	399 aa		11.58	□□□□□ -0.56
SDHD-209	ENST00000640554	DYNLT3	P51808	116 aa		11.58	□□□□□ -0.56
SDHD-209	ENST00000640554	PRRX1	P54821	245 aa		11.58	□□□□□ -0.56
SDHD-209	ENST00000640554	GP2	P55259	537 aa	Known RBP	11.58	□□□□□ -0.56
SDHD-209	ENST00000640554	DYNC1I2	Q13409	638 aa	Known RBP	11.58	□□□□□ -0.56
SDHD-209	ENST00000640554	INSL4	Q14641	139 aa		11.58	□□□□□ -0.56
SDHD-209	ENST00000640554	TAF9	Q16594	264 aa		11.58	□□□□□ -0.56
SDHD-209	ENST00000640554	ATAD3C	Q5T2N8	411 aa		11.58	□□□□□ -0.56
SDHD-209	ENST00000640554	RSBN1	Q5VWQ0	802 aa	Predicted RBP	11.58	□□□□□ -0.56
SDHD-209	ENST00000640554	TMEM91	Q6ZNR0	172 aa		11.58	□□□□□ -0.56
SDHD-209	ENST00000640554	ABHD12	Q8N2K0	398 aa		11.58	□□□□□ -0.56
SDHD-209	ENST00000640554	OR6M1	Q8NGM8	313 aa		11.58	□□□□□ -0.56
SDHD-209	ENST00000640554	AJUBA	Q96IF1	538 aa		11.58	□□□□□ -0.56
SDHD-209	ENST00000640554	NKX3-1	Q99801	234 aa	Predicted RBP	11.58	□□□□□ -0.56
SDHD-209	ENST00000640554	SELENOI	Q9C0D9	397 aa		11.58	□□□□□ -0.56
SDHD-209	ENST00000640554	BEX1	Q9HBH7	125 aa		11.58	□□□□□ -0.56
SDHD-209	ENST00000640554	TNFRSF19	Q9NS68	423 aa		11.58	□□□□□ -0.56
SDHD-209	ENST00000640554	RCC2	Q9P258	522 aa	Known RBP	11.58	□□□□□ -0.56
SDHD-209	ENST00000640554	HSPB6	O14558	160 aa		11.57	□□□□□ -0.56
SDHD-209	ENST00000640554	TOR1A	O14656	332 aa		11.57	□□□□□ -0.56
SDHD-209	ENST00000640554	SLC22A1	O15245	554 aa		11.57	□□□□□ -0.56
SDHD-209	ENST00000640554	HTR1D	P28221	377 aa		11.57	□□□□□ -0.56
SDHD-209	ENST00000640554	HTR2C	P28335	458 aa		11.57	□□□□□ -0.56
SDHD-209	ENST00000640554	CEACAM3	P40198	252 aa		11.57	□□□□□ -0.56
SDHD-209	ENST00000640554	ARHGDIB	P52566	201 aa		11.57	□□□□□ -0.56
SDHD-209	ENST00000640554	FAM27D1	Q5T7N8	215 aa		11.57	□□□□□ -0.56
SDHD-209	ENST00000640554	UBE2U	Q5VVX9	321 aa		11.57	□□□□□ -0.56
SDHD-209	ENST00000640554	NEK7	Q8TDX7	302 aa		11.57	□□□□□ -0.56
SDHD-209	ENST00000640554		Q96M66	194 aa		11.57	□□□□□ -0.56
SDHD-209	ENST00000640554	ZNF747	Q9BV97	191 aa		11.57	□□□□□ -0.56
SDHD-209	ENST00000640554	PPIL3	Q9H2H8	161 aa	Known RBP	11.57	□□□□□ -0.56
SDHD-209	ENST00000640554	DPM3	Q9P2X0	92 aa		11.57	□□□□□ -0.56
SDHD-209	ENST00000640554	PITPNC1	Q9UKF7	332 aa		11.57	□□□□□ -0.56
SDHD-209	ENST00000640554	TRAV1-2	A0A0B4J238	106 aa		11.56	□□□□□ -0.56
SDHD-209	ENST00000640554	TRDV1	A0A1B0GX56	115 aa		11.56	□□□□□ -0.56
SDHD-209	ENST00000640554		A0A1W2PP11	408 aa		11.56	□□□□□ -0.56
SDHD-209	ENST00000640554	MEX3A	A1L020	520 aa	Known RBP	11.56	□□□□□ -0.56
SDHD-209	ENST00000640554	LEUTX	A8MZ59	168 aa		11.56	□□□□□ -0.56
SDHD-209	ENST00000640554	NPIPB11	E5RHQ5	1161 aa		11.56	□□□□□ -0.56
SDHD-209	ENST00000640554	PDCD5	O14737	125 aa		11.56	□□□□□ -0.56
SDHD-209	ENST00000640554	ORC5	O43913	435 aa		11.56	□□□□□ -0.56
SDHD-209	ENST00000640554	IL1A	P01583	271 aa		11.56	□□□□□ -0.56
SDHD-209	ENST00000640554	CFP	P27918	469 aa		11.56	□□□□□ -0.56
SDHD-209	ENST00000640554	GLP1R	P43220	463 aa		11.56	□□□□□ -0.56
SDHD-209	ENST00000640554	RAG2	P55895	527 aa		11.56	□□□□□ -0.56
SDHD-209	ENST00000640554	RPS25	P62851	125 aa	Known RBP	11.56	□□□□□ -0.56
SDHD-209	ENST00000640554	FABP5	Q01469	135 aa		11.56	□□□□□ -0.56
SDHD-209	ENST00000640554	C17orf58	Q2M2W7	97 aa		11.56	□□□□□ -0.56
SDHD-209	ENST00000640554	TMEM30B	Q3MIR4	351 aa		11.56	□□□□□ -0.56
SDHD-209	ENST00000640554	RAB12	Q6IQ22	244 aa		11.56	□□□□□ -0.56
SDHD-209	ENST00000640554	TRAT1	Q6PIZ9	186 aa		11.56	□□□□□ -0.56
SDHD-209	ENST00000640554	CD200R1L	Q6Q8B3	271 aa		11.56	□□□□□ -0.56
SDHD-209	ENST00000640554	SHISA2	Q6UWI4	295 aa		11.56	□□□□□ -0.56
SDHD-209	ENST00000640554	ZNF497	Q6ZNH5	498 aa		11.56	□□□□□ -0.56
SDHD-209	ENST00000640554	SPART	Q8N0X7	666 aa		11.56	□□□□□ -0.56
SDHD-209	ENST00000640554	TMEM104	Q8NE00	496 aa		11.56	□□□□□ -0.56
SDHD-209	ENST00000640554	OR52M1	Q8NGK5	317 aa		11.56	□□□□□ -0.56
SDHD-209	ENST00000640554	PLPPR1	Q8TBJ4	325 aa		11.56	□□□□□ -0.56
SDHD-209	ENST00000640554	ABCB10	Q9NRK6	738 aa		11.56	□□□□□ -0.56
SDHD-209	ENST00000640554	NDUFB11	Q9NX14	153 aa		11.56	□□□□□ -0.56
SDHD-209	ENST00000640554	ING3	Q9NXR8	418 aa		11.56	□□□□□ -0.56
SDHD-209	ENST00000640554	CALY	Q9NYX4	217 aa		11.56	□□□□□ -0.56
SDHD-209	ENST00000640554	IDI2-AS1	Q9NZ38	188 aa		11.56	□□□□□ -0.56
SDHD-209	ENST00000640554	C1RL	Q9NZP8	487 aa		11.56	□□□□□ -0.56
SDHD-209	ENST00000640554	PEX16	Q9Y5Y5	336 aa		11.56	□□□□□ -0.56
SDHD-209	ENST00000640554	OOSP1	A8MZH6	123 aa		11.55	□□□□□ -0.56
SDHD-209	ENST00000640554		H3BUX3	64 aa		11.55	□□□□□ -0.56
SDHD-209	ENST00000640554	HAX1	O00165	279 aa		11.55	□□□□□ -0.56
SDHD-209	ENST00000640554	CCRL2	O00421	344 aa		11.55	□□□□□ -0.56
SDHD-209	ENST00000640554	SLC17A2	O00624	439 aa		11.55	□□□□□ -0.56
SDHD-209	ENST00000640554	PDCD6	O75340	191 aa		11.55	□□□□□ -0.56
SDHD-209	ENST00000640554	MMP23A	O75900	390 aa		11.55	□□□□□ -0.56
SDHD-209	ENST00000640554	IGLV1-47	P01700	117 aa		11.55	□□□□□ -0.56
SDHD-209	ENST00000640554	MT-ND4	P03905	459 aa		11.55	□□□□□ -0.56
SDHD-209	ENST00000640554	CALR	P27797	417 aa	Known RBP	11.55	□□□□□ -0.56
SDHD-209	ENST00000640554	FAM189A2	Q15884	450 aa		11.55	□□□□□ -0.56
SDHD-209	ENST00000640554	SSX2	Q16385	188 aa		11.55	□□□□□ -0.56
SDHD-209	ENST00000640554	PRAMEF5	Q5TYX0	476 aa		11.55	□□□□□ -0.56
SDHD-209	ENST00000640554	DHRS7B	Q6IAN0	325 aa	Predicted RBP	11.55	□□□□□ -0.56
SDHD-209	ENST00000640554	ZNF773	Q6PK81	442 aa		11.55	□□□□□ -0.56
SDHD-209	ENST00000640554	OR2W3	Q7Z3T1	314 aa		11.55	□□□□□ -0.56
SDHD-209	ENST00000640554	ZNF554	Q86TJ5	538 aa		11.55	□□□□□ -0.56
SDHD-209	ENST00000640554	GAPT	Q8N292	157 aa		11.55	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms