RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 OR2A2Q6IF42 318 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 CNIH2Q6PI25 160 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 DRAM2Q6UX65 266 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 NHLRC1Q6VVB1 395 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 STAC2Q6ZMT1 411 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 SERPINA12Q8IW75 414 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 CCDC36Q8IYA8 594 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 ELMOD2Q8IZ81 293 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 CENPSQ8N2Z9 138 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 PRSS35Q8N3Z0 413 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 Q8N402 240 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 LRRC18Q8N456 261 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 SLC22A24Q8N4F4 322 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 JAGN1Q8N5M9 183 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 OR52H1Q8NGJ2 320 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 OR6M1Q8NGM8 313 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 ENKURQ8TC29 256 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 CHPT1Q8WUD6 406 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 ITFG2Q969R8 447 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 RFT1Q96AA3 541 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 DOCK10Q96BY6 2186 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 PPP1R14BQ96C90 147 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 C10orf35Q96D05 121 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 ZNF799Q96GE5 643 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 FAM218AQ96MZ4 157 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 ALKBH3Q96Q83 286 aaPredicted RBP3.91□□□□□ -1.78
VPS29-212ENST00000621131 AMELYQ99218 206 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 S100A13Q99584 98 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 OVOL2Q9BRP0 275 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 SLC22A4Q9H015 551 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 RGCCQ9H4X1 137 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 ZDHHC11Q9H8X9 412 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 CALHM2Q9HA72 323 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 CRLF2Q9HC73 371 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 DIABLOQ9NR28 239 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 DDX28Q9NUL7 540 aaKnown RBP3.91□□□□□ -1.78
VPS29-212ENST00000621131 TMEM38BQ9NVV0 291 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 FAM206AQ9NX38 181 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 FBXL3Q9UKT7 428 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 SLC22A13Q9Y226 551 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 AK6Q9Y3D8 172 aaKnown RBP3.91□□□□□ -1.78
VPS29-212ENST00000621131 TMED3Q9Y3Q3 217 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 TIMM10BQ9Y5J6 103 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 N6AMT1Q9Y5N5 214 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 FN1P02751 2386 aaKnown RBP3.91□□□□□ -1.78
VPS29-212ENST00000621131 CNTRLQ7Z7A1 2325 aa3.9□□□□□ -1.78
VPS29-212ENST00000621131 A0A0U1RQV5 110 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 METTL21EPA6NDL7 271 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 DHRS7CA6NNS2 312 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 F5H5K5 113 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 H0YC42 278 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 RPL36A-HNRNPH2H7BZ11 118 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 SLC17A2O00624 439 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 RER1O15258 196 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 SS18L1O75177 396 aaPredicted RBP3.9□□□□□ -1.79
VPS29-212ENST00000621131 ECDO95905 644 aaPredicted RBP3.9□□□□□ -1.79
VPS29-212ENST00000621131 HCKP08631 526 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 UBBP0CG47 229 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 PSKH1P11801 424 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 IL7P13232 177 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 GABRA1P14867 456 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 B4GALT1P15291 398 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 HTR2CP28335 458 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 PTGER4P35408 488 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 FAUP35544 74 aaKnown RBP3.9□□□□□ -1.79
VPS29-212ENST00000621131 CAV3P56539 151 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 OR10A3P58181 314 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 ZNF121P58317 390 aaPredicted RBP3.9□□□□□ -1.79
VPS29-212ENST00000621131 UBE2NP61088 152 aaKnown RBP3.9□□□□□ -1.79
VPS29-212ENST00000621131 ASAH1Q13510 395 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 ENDOGQ14249 297 aaKnown RBP3.9□□□□□ -1.79
VPS29-212ENST00000621131 INSL4Q14641 139 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 TAB1Q15750 504 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 SLC25A35Q3KQZ1 300 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 TMEM69Q5SWH9 247 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 LCE3AQ5TA76 89 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 RPUSD3Q6P087 351 aaKnown RBP3.9□□□□□ -1.79
VPS29-212ENST00000621131 IGFL3Q6UXB1 125 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 TUSC5Q8IXB3 177 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 CDH26Q8IXH8 852 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 C11orf53Q8IXP5 236 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 MMD2Q8IY49 270 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 FTMTQ8N4E7 242 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 TOMM5Q8N4H5 51 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 ZIC4Q8N9L1 334 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 OR1M1Q8NGA1 313 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 OR8B12Q8NGG6 310 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 OR1F12Q8NHA8 337 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 FNDC9Q8TBE3 224 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 OR51E1Q8TCB6 317 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 LGALS14Q8TCE9 139 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 ABHD3Q8WU67 409 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 PP6455Q8WZ26 134 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 RGP1Q92546 391 aaPredicted RBP3.9□□□□□ -1.79
VPS29-212ENST00000621131 NABP1Q96AH0 204 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 FAM71F1Q96KD3 344 aaPredicted RBP3.9□□□□□ -1.79
VPS29-212ENST00000621131 TECTBQ96PL2 329 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 GPER1Q99527 375 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 C7orf50Q9BRJ6 194 aaKnown RBP3.9□□□□□ -1.79
VPS29-212ENST00000621131 UQCC2Q9BRT2 126 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms