RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 SERPINA2P20848 420 aa14.16□□□□□ -0.14
SHKBP1-203ENST00000594298 KCNJ3P48549 501 aa14.16□□□□□ -0.14
SHKBP1-203ENST00000594298 EMX1Q04741 257 aaPredicted RBP14.16□□□□□ -0.14
SHKBP1-203ENST00000594298 ZNF273Q14593 569 aa14.16□□□□□ -0.14
SHKBP1-203ENST00000594298 SLC22A6Q4U2R8 563 aa14.16□□□□□ -0.14
SHKBP1-203ENST00000594298 AWAT2Q6E213 333 aa14.16□□□□□ -0.14
SHKBP1-203ENST00000594298 GLIPR1L1Q6UWM5 242 aa14.16□□□□□ -0.14
SHKBP1-203ENST00000594298 MUL1Q969V5 352 aa14.16□□□□□ -0.14
SHKBP1-203ENST00000594298 ZNF714Q96N38 554 aa14.16□□□□□ -0.14
SHKBP1-203ENST00000594298 BARHL1Q9BZE3 327 aa14.16□□□□□ -0.14
SHKBP1-203ENST00000594298 SERTAD4Q9NUC0 356 aa14.16□□□□□ -0.14
SHKBP1-203ENST00000594298 UBE2J1Q9Y385 318 aaPredicted RBP14.16□□□□□ -0.14
SHKBP1-203ENST00000594298 TRGV10A0A0A0MS01 117 aa14.15□□□□□ -0.14
SHKBP1-203ENST00000594298 MAGEA13PA6NCF6 341 aa14.15□□□□□ -0.14
SHKBP1-203ENST00000594298 H3BUI4 141 aa14.15□□□□□ -0.14
SHKBP1-203ENST00000594298 FBXO24O75426 580 aa14.15□□□□□ -0.14
SHKBP1-203ENST00000594298 PRB2P02812 416 aaPredicted RBP14.15□□□□□ -0.14
SHKBP1-203ENST00000594298 CCL3L1P16619 93 aa14.15□□□□□ -0.14
SHKBP1-203ENST00000594298 COX7A1P24310 79 aa14.15□□□□□ -0.14
SHKBP1-203ENST00000594298 RANBP1P43487 201 aa14.15□□□□□ -0.14
SHKBP1-203ENST00000594298 INSL4Q14641 139 aa14.15□□□□□ -0.14
SHKBP1-203ENST00000594298 PAN3Q58A45 887 aaKnown RBP14.15□□□□□ -0.14
SHKBP1-203ENST00000594298 TRAPPC6BQ86SZ2 158 aa14.15□□□□□ -0.14
SHKBP1-203ENST00000594298 WIPF2Q8TF74 440 aaPredicted RBP14.15□□□□□ -0.14
SHKBP1-203ENST00000594298 FCGR1BQ92637 280 aa14.15□□□□□ -0.14
SHKBP1-203ENST00000594298 NKX3-1Q99801 234 aaPredicted RBP14.15□□□□□ -0.14
SHKBP1-203ENST00000594298 TCF19Q9Y242 345 aa14.15□□□□□ -0.14
SHKBP1-203ENST00000594298 UBBP0CG47 229 aa14.14□□□□□ -0.15
SHKBP1-203ENST00000594298 DLX6P56179 175 aa14.14□□□□□ -0.15
SHKBP1-203ENST00000594298 RBM11P57052 281 aaKnown RBP14.14□□□□□ -0.15
SHKBP1-203ENST00000594298 RPS25P62851 125 aaKnown RBP14.14□□□□□ -0.15
SHKBP1-203ENST00000594298 AESQ08117 197 aa14.14□□□□□ -0.15
SHKBP1-203ENST00000594298 MPV17LQ2QL34 196 aa14.14□□□□□ -0.15
SHKBP1-203ENST00000594298 PIGYQ3MUY2 71 aa14.14□□□□□ -0.15
SHKBP1-203ENST00000594298 KRBOX4Q5JUW0 171 aa14.14□□□□□ -0.15
SHKBP1-203ENST00000594298 LHFPL4Q7Z7J7 247 aa14.14□□□□□ -0.15
SHKBP1-203ENST00000594298 NDUFA11Q86Y39 141 aa14.14□□□□□ -0.15
SHKBP1-203ENST00000594298 SPARTQ8N0X7 666 aa14.14□□□□□ -0.15
SHKBP1-203ENST00000594298 OR13D1Q8NGV5 346 aa14.14□□□□□ -0.15
SHKBP1-203ENST00000594298 GAL3ST2Q9H3Q3 398 aa14.14□□□□□ -0.15
SHKBP1-203ENST00000594298 NCOR1P1Q9H4R4 102 aa14.14□□□□□ -0.15
SHKBP1-203ENST00000594298 IFT22Q9H7X7 185 aa14.14□□□□□ -0.15
SHKBP1-203ENST00000594298 SPACA1Q9HBV2 294 aa14.14□□□□□ -0.15
SHKBP1-203ENST00000594298 TAS2R3Q9NYW6 316 aa14.14□□□□□ -0.15
SHKBP1-203ENST00000594298 TBL2Q9Y4P3 447 aaKnown RBP14.14□□□□□ -0.15
SHKBP1-203ENST00000594298 A6NDX4 124 aa14.13□□□□□ -0.15
SHKBP1-203ENST00000594298 ODF3BA8MYP8 253 aa14.13□□□□□ -0.15
SHKBP1-203ENST00000594298 OR7C1O76099 320 aaPredicted RBP14.13□□□□□ -0.15
SHKBP1-203ENST00000594298 HABP2Q14520 560 aaPredicted RBP14.13□□□□□ -0.15
SHKBP1-203ENST00000594298 OXLD1Q5BKU9 147 aa14.13□□□□□ -0.15
SHKBP1-203ENST00000594298 FAM27D1Q5T7N8 215 aa14.13□□□□□ -0.15
SHKBP1-203ENST00000594298 UBE2UQ5VVX9 321 aa14.13□□□□□ -0.15
SHKBP1-203ENST00000594298 CCBE1Q6UXH8 406 aaPredicted RBP14.13□□□□□ -0.15
SHKBP1-203ENST00000594298 LRRTM1Q86UE6 522 aa14.13□□□□□ -0.15
SHKBP1-203ENST00000594298 LYPD6Q86Y78 171 aa14.13□□□□□ -0.15
SHKBP1-203ENST00000594298 DYNAPQ8N1N2 210 aa14.13□□□□□ -0.15
SHKBP1-203ENST00000594298 TPRX1Q8N7U7 411 aa14.13□□□□□ -0.15
SHKBP1-203ENST00000594298 ZNF565Q8N9K5 539 aa14.13□□□□□ -0.15
SHKBP1-203ENST00000594298 CORO2AQ92828 525 aa14.13□□□□□ -0.15
SHKBP1-203ENST00000594298 MALSU1Q96EH3 234 aa14.13□□□□□ -0.15
SHKBP1-203ENST00000594298 CST11Q9H112 138 aa14.13□□□□□ -0.15
SHKBP1-203ENST00000594298 NECAP2Q9NVZ3 263 aa14.13□□□□□ -0.15
SHKBP1-203ENST00000594298 OR6C3Q9NZP0 311 aa14.13□□□□□ -0.15
SHKBP1-203ENST00000594298 TRAV24A0A0B4J272 114 aa14.12□□□□□ -0.15
SHKBP1-203ENST00000594298 ODAMA1E959 279 aa14.12□□□□□ -0.15
SHKBP1-203ENST00000594298 GEMIN2O14893 280 aaKnown RBP14.12□□□□□ -0.15
SHKBP1-203ENST00000594298 IGHV1-8P0DP01 117 aa14.12□□□□□ -0.15
SHKBP1-203ENST00000594298 CD28P10747 220 aa14.12□□□□□ -0.15
SHKBP1-203ENST00000594298 GLIPR1P48060 266 aa14.12□□□□□ -0.15
SHKBP1-203ENST00000594298 PSMD7P51665 324 aa14.12□□□□□ -0.15
SHKBP1-203ENST00000594298 GP2P55259 537 aaKnown RBP14.12□□□□□ -0.15
SHKBP1-203ENST00000594298 ATXN7L3Q14CW9 347 aaPredicted RBP14.12□□□□□ -0.15
SHKBP1-203ENST00000594298 NSUN5P1Q3KNT7 163 aa14.12□□□□□ -0.15
SHKBP1-203ENST00000594298 C1orf100Q5SVJ3 147 aa14.12□□□□□ -0.15
SHKBP1-203ENST00000594298 OR52W1Q6IF63 320 aa14.12□□□□□ -0.15
SHKBP1-203ENST00000594298 ZNF773Q6PK81 442 aa14.12□□□□□ -0.15
SHKBP1-203ENST00000594298 ZNF782Q6ZMW2 699 aaPredicted RBP14.12□□□□□ -0.15
SHKBP1-203ENST00000594298 TMEM91Q6ZNR0 172 aa14.12□□□□□ -0.15
SHKBP1-203ENST00000594298 LYG1Q8N1E2 194 aa14.12□□□□□ -0.15
SHKBP1-203ENST00000594298 OR4F17Q8NGA8 305 aa14.12□□□□□ -0.15
SHKBP1-203ENST00000594298 OR11H6Q8NGC7 330 aa14.12□□□□□ -0.15
SHKBP1-203ENST00000594298 OR4D6Q8NGJ1 314 aa14.12□□□□□ -0.15
SHKBP1-203ENST00000594298 OR4F4Q96R69 305 aa14.12□□□□□ -0.15
SHKBP1-203ENST00000594298 DPCDQ9BVM2 203 aaPredicted RBP14.12□□□□□ -0.15
SHKBP1-203ENST00000594298 WNT10AQ9GZT5 417 aa14.12□□□□□ -0.15
SHKBP1-203ENST00000594298 MMP28Q9H239 520 aa14.12□□□□□ -0.15
SHKBP1-203ENST00000594298 PITPNC1Q9UKF7 332 aa14.12□□□□□ -0.15
SHKBP1-203ENST00000594298 FAM90A10PA6NDY2 464 aa14.11□□□□□ -0.15
SHKBP1-203ENST00000594298 FAM90A18PA6NE21 464 aa14.11□□□□□ -0.15
SHKBP1-203ENST00000594298 FAM90A16PA6NEW6 464 aa14.11□□□□□ -0.15
SHKBP1-203ENST00000594298 FAM90A20PA6NIJ5 464 aa14.11□□□□□ -0.15
SHKBP1-203ENST00000594298 FAM90A7PA6NKC0 464 aa14.11□□□□□ -0.15
SHKBP1-203ENST00000594298 ADARB2-AS1A8MUL3 147 aa14.11□□□□□ -0.15
SHKBP1-203ENST00000594298 FAM90A22PA8MWA6 464 aa14.11□□□□□ -0.15
SHKBP1-203ENST00000594298 FAM90A12PA8MX19 464 aa14.11□□□□□ -0.15
SHKBP1-203ENST00000594298 FAM90A5PA8MXJ8 464 aa14.11□□□□□ -0.15
SHKBP1-203ENST00000594298 FAM90A23PA8MXZ1 464 aa14.11□□□□□ -0.15
SHKBP1-203ENST00000594298 CCRL2O00421 344 aa14.11□□□□□ -0.15
SHKBP1-203ENST00000594298 HSPB6O14558 160 aa14.11□□□□□ -0.15
SHKBP1-203ENST00000594298 CRTAPO75718 401 aaPredicted RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms