RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 MAPK3P27361 379 aaPredicted RBP14.9□□□□□ -0.02
SHKBP1-202ENST00000593764 HTR1DP28221 377 aa14.9□□□□□ -0.02
SHKBP1-202ENST00000593764 DYNLT3P51808 116 aa14.9□□□□□ -0.02
SHKBP1-202ENST00000593764 GPR50Q13585 617 aa14.9□□□□□ -0.02
SHKBP1-202ENST00000593764 GPR176Q14439 515 aa14.9□□□□□ -0.02
SHKBP1-202ENST00000593764 MED22Q15528 200 aa14.9□□□□□ -0.02
SHKBP1-202ENST00000593764 MPV17LQ2QL34 196 aa14.9□□□□□ -0.02
SHKBP1-202ENST00000593764 THRSPQ92748 146 aa14.9□□□□□ -0.02
SHKBP1-202ENST00000593764 KIRREL1Q96J84 757 aa14.9□□□□□ -0.02
SHKBP1-202ENST00000593764 TMED9Q9BVK6 235 aa14.9□□□□□ -0.02
SHKBP1-202ENST00000593764 PCDHB16Q9NRJ7 776 aa14.9□□□□□ -0.02
SHKBP1-202ENST00000593764 FBLN5Q9UBX5 448 aa14.9□□□□□ -0.02
SHKBP1-202ENST00000593764 TCF19Q9Y242 345 aa14.9□□□□□ -0.02
SHKBP1-202ENST00000593764 A6NDX4 124 aa14.89□□□□□ -0.03
SHKBP1-202ENST00000593764 NPIPB11E5RHQ5 1161 aa14.89□□□□□ -0.03
SHKBP1-202ENST00000593764 GLP1RP43220 463 aa14.89□□□□□ -0.03
SHKBP1-202ENST00000593764 HSPA13P48723 471 aa14.89□□□□□ -0.03
SHKBP1-202ENST00000593764 BRICD5Q6PL45 260 aa14.89□□□□□ -0.03
SHKBP1-202ENST00000593764 LIAT1Q6ZQX7 453 aa14.89□□□□□ -0.03
SHKBP1-202ENST00000593764 NDNFQ8TB73 568 aa14.89□□□□□ -0.03
SHKBP1-202ENST00000593764 MRPS24Q96EL2 167 aaKnown RBP14.89□□□□□ -0.03
SHKBP1-202ENST00000593764 RAB18Q9NP72 206 aa14.89□□□□□ -0.03
SHKBP1-202ENST00000593764 CALYQ9NYX4 217 aa14.89□□□□□ -0.03
SHKBP1-202ENST00000593764 DPM3Q9P2X0 92 aa14.89□□□□□ -0.03
SHKBP1-202ENST00000593764 WNK1Q9H4A3 2382 aa14.89□□□□□ -0.03
SHKBP1-202ENST00000593764 VWFP04275 2813 aa14.88□□□□□ -0.03
SHKBP1-202ENST00000593764 TRAV39A0A0B4J263 110 aa14.88□□□□□ -0.03
SHKBP1-202ENST00000593764 RGS10O43665 173 aa14.88□□□□□ -0.03
SHKBP1-202ENST00000593764 ATP6V1G2O95670 118 aa14.88□□□□□ -0.03
SHKBP1-202ENST00000593764 KIR2DS4P43632 304 aa14.88□□□□□ -0.03
SHKBP1-202ENST00000593764 TPBGQ13641 420 aa14.88□□□□□ -0.03
SHKBP1-202ENST00000593764 LIPKQ5VXJ0 399 aa14.88□□□□□ -0.03
SHKBP1-202ENST00000593764 AWAT2Q6E213 333 aa14.88□□□□□ -0.03
SHKBP1-202ENST00000593764 LRRTM1Q86UE6 522 aa14.88□□□□□ -0.03
SHKBP1-202ENST00000593764 NKAIN3Q8N8D7 197 aa14.88□□□□□ -0.03
SHKBP1-202ENST00000593764 TMEM104Q8NE00 496 aa14.88□□□□□ -0.03
SHKBP1-202ENST00000593764 ZNF596Q8TC21 504 aa14.88□□□□□ -0.03
SHKBP1-202ENST00000593764 MRGPRDQ8TDS7 321 aa14.88□□□□□ -0.03
SHKBP1-202ENST00000593764 UQCC2Q9BRT2 126 aa14.88□□□□□ -0.03
SHKBP1-202ENST00000593764 RCC2Q9P258 522 aaKnown RBP14.88□□□□□ -0.03
SHKBP1-202ENST00000593764 SIGLEC9Q9Y336 463 aa14.88□□□□□ -0.03
SHKBP1-202ENST00000593764 FAM90A22PA8MWA6 464 aa14.87□□□□□ -0.03
SHKBP1-202ENST00000593764 LY6LH3BQJ8 138 aa14.87□□□□□ -0.03
SHKBP1-202ENST00000593764 IL1AP01583 271 aa14.87□□□□□ -0.03
SHKBP1-202ENST00000593764 NFYBP25208 207 aa14.87□□□□□ -0.03
SHKBP1-202ENST00000593764 GABRA5P31644 462 aa14.87□□□□□ -0.03
SHKBP1-202ENST00000593764 HLA-DRB5Q30154 266 aa14.87□□□□□ -0.03
SHKBP1-202ENST00000593764 ATAD3CQ5T2N8 411 aa14.87□□□□□ -0.03
SHKBP1-202ENST00000593764 PRSS48Q7RTY5 328 aa14.87□□□□□ -0.03
SHKBP1-202ENST00000593764 CEACAM19Q7Z692 300 aa14.87□□□□□ -0.03
SHKBP1-202ENST00000593764 TMEM219Q86XT9 240 aa14.87□□□□□ -0.03
SHKBP1-202ENST00000593764 RFESDQ8TAC1 157 aa14.87□□□□□ -0.03
SHKBP1-202ENST00000593764 CNBD2Q96M20 576 aa14.87□□□□□ -0.03
SHKBP1-202ENST00000593764 BANF2Q9H503 90 aa14.87□□□□□ -0.03
SHKBP1-202ENST00000593764 RANBP3Q9H6Z4 567 aaPredicted RBP14.87□□□□□ -0.03
SHKBP1-202ENST00000593764 ISYNA1Q9NPH2 558 aa14.87□□□□□ -0.03
SHKBP1-202ENST00000593764 ABCB10Q9NRK6 738 aa14.87□□□□□ -0.03
SHKBP1-202ENST00000593764 IDI2-AS1Q9NZ38 188 aa14.87□□□□□ -0.03
SHKBP1-202ENST00000593764 BUB1B-PAK6H3BSN5 160 aa14.86□□□□□ -0.03
SHKBP1-202ENST00000593764 UCHL1P09936 223 aa14.86□□□□□ -0.03
SHKBP1-202ENST00000593764 CD37P11049 281 aa14.86□□□□□ -0.03
SHKBP1-202ENST00000593764 SRMP19623 302 aa14.86□□□□□ -0.03
SHKBP1-202ENST00000593764 SSTR5P35346 364 aa14.86□□□□□ -0.03
SHKBP1-202ENST00000593764 VHLP40337 213 aa14.86□□□□□ -0.03
SHKBP1-202ENST00000593764 MAP2K4P45985 399 aa14.86□□□□□ -0.03
SHKBP1-202ENST00000593764 EFNB2P52799 333 aa14.86□□□□□ -0.03
SHKBP1-202ENST00000593764 TMEM91Q6ZNR0 172 aa14.86□□□□□ -0.03
SHKBP1-202ENST00000593764 PHYHIPQ92561 330 aa14.86□□□□□ -0.03
SHKBP1-202ENST00000593764 UFD1Q92890 307 aa14.86□□□□□ -0.03
SHKBP1-202ENST00000593764 TMEM203Q969S6 136 aa14.86□□□□□ -0.03
SHKBP1-202ENST00000593764 Q96M66 194 aa14.86□□□□□ -0.03
SHKBP1-202ENST00000593764 TCF7L1Q9HCS4 588 aa14.86□□□□□ -0.03
SHKBP1-202ENST00000593764 RAB26Q9ULW5 256 aa14.86□□□□□ -0.03
SHKBP1-202ENST00000593764 TMEM30CPA0ZSE6 113 aa14.85□□□□□ -0.03
SHKBP1-202ENST00000593764 LEUTXA8MZ59 168 aa14.85□□□□□ -0.03
SHKBP1-202ENST00000593764 C15orf65H3BRN8 121 aa14.85□□□□□ -0.03
SHKBP1-202ENST00000593764 TOR1AO14656 332 aa14.85□□□□□ -0.03
SHKBP1-202ENST00000593764 MT-ND4P03905 459 aa14.85□□□□□ -0.03
SHKBP1-202ENST00000593764 HSMCR30P0CW71 290 aa14.85□□□□□ -0.03
SHKBP1-202ENST00000593764 MGMTP16455 207 aa14.85□□□□□ -0.03
SHKBP1-202ENST00000593764 GZMHP20718 246 aa14.85□□□□□ -0.03
SHKBP1-202ENST00000593764 PRRX1P54821 245 aa14.85□□□□□ -0.03
SHKBP1-202ENST00000593764 RBM48Q5RL73 367 aaKnown RBP14.85□□□□□ -0.03
SHKBP1-202ENST00000593764 C1orf100Q5SVJ3 147 aa14.85□□□□□ -0.03
SHKBP1-202ENST00000593764 SIGIRRQ6IA17 410 aa14.85□□□□□ -0.03
SHKBP1-202ENST00000593764 ZNF497Q6ZNH5 498 aa14.85□□□□□ -0.03
SHKBP1-202ENST00000593764 OR4C13Q8NGP0 309 aa14.85□□□□□ -0.03
SHKBP1-202ENST00000593764 OR9G1Q8NH87 305 aa14.85□□□□□ -0.03
SHKBP1-202ENST00000593764 LEAP2Q969E1 77 aa14.85□□□□□ -0.03
SHKBP1-202ENST00000593764 CYYR1Q96J86 154 aa14.85□□□□□ -0.03
SHKBP1-202ENST00000593764 SELENOIQ9C0D9 397 aa14.85□□□□□ -0.03
SHKBP1-202ENST00000593764 NPFFR1Q9GZQ6 430 aa14.85□□□□□ -0.03
SHKBP1-202ENST00000593764 CCDC90BQ9GZT6 254 aa14.85□□□□□ -0.03
SHKBP1-202ENST00000593764 PITPNC1Q9UKF7 332 aa14.85□□□□□ -0.03
SHKBP1-202ENST00000593764 FAM90A10PA6NDY2 464 aa14.84□□□□□ -0.03
SHKBP1-202ENST00000593764 FAM90A18PA6NE21 464 aa14.84□□□□□ -0.03
SHKBP1-202ENST00000593764 FAM90A16PA6NEW6 464 aa14.84□□□□□ -0.03
SHKBP1-202ENST00000593764 FAM90A20PA6NIJ5 464 aa14.84□□□□□ -0.03
SHKBP1-202ENST00000593764 FAM90A7PA6NKC0 464 aa14.84□□□□□ -0.03
SHKBP1-202ENST00000593764 FAM90A12PA8MX19 464 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms