RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 PRKACGP22612 351 aa3.97□□□□□ -1.77
SMG1-207ENST00000563235 RPS3P23396 243 aaKnown RBP eCLIP3.97□□□□□ -1.77
SMG1-207ENST00000563235 APOC4P55056 127 aa3.97□□□□□ -1.77
SMG1-207ENST00000563235 DEFA3P59666 94 aa3.97□□□□□ -1.77
SMG1-207ENST00000563235 FKBP3Q00688 224 aaKnown RBP3.97□□□□□ -1.77
SMG1-207ENST00000563235 SLC25A11Q02978 314 aaKnown RBP3.97□□□□□ -1.77
SMG1-207ENST00000563235 MEF2CQ06413 473 aaPredicted RBP3.97□□□□□ -1.77
SMG1-207ENST00000563235 EFEMP1Q12805 493 aa3.97□□□□□ -1.77
SMG1-207ENST00000563235 GINS1Q14691 196 aa3.97□□□□□ -1.77
SMG1-207ENST00000563235 RAB35Q15286 201 aa3.97□□□□□ -1.77
SMG1-207ENST00000563235 PYY3Q5JQD4 70 aa3.97□□□□□ -1.77
SMG1-207ENST00000563235 AKR1C8PQ5T2L2 129 aa3.97□□□□□ -1.77
SMG1-207ENST00000563235 ZCCHC24Q8N2G6 241 aaKnown RBP3.97□□□□□ -1.77
SMG1-207ENST00000563235 OR10G7Q8NGN6 311 aa3.97□□□□□ -1.77
SMG1-207ENST00000563235 OR5W2Q8NH69 310 aa3.97□□□□□ -1.77
SMG1-207ENST00000563235 RPLP0P6Q8NHW5 317 aa3.97□□□□□ -1.77
SMG1-207ENST00000563235 ROPN1LQ96C74 230 aa3.97□□□□□ -1.77
SMG1-207ENST00000563235 OVOL2Q9BRP0 275 aa3.97□□□□□ -1.77
SMG1-207ENST00000563235 DOHHQ9BU89 302 aa3.97□□□□□ -1.77
SMG1-207ENST00000563235 TM2D2Q9BX73 214 aa3.97□□□□□ -1.77
SMG1-207ENST00000563235 SPANXA1Q9NS26 97 aa3.97□□□□□ -1.77
SMG1-207ENST00000563235 CES1P1Q9UKY3 287 aa3.97□□□□□ -1.77
SMG1-207ENST00000563235 MAST2Q6P0Q8 1798 aa3.97□□□□□ -1.77
SMG1-207ENST00000563235 IGHV2-70DA0A0C4DH43 119 aa3.97□□□□□ -1.77
SMG1-207ENST00000563235 SMKR1H3BMG3 65 aa3.97□□□□□ -1.77
SMG1-207ENST00000563235 FAM229AH3BQW9 127 aa3.97□□□□□ -1.77
SMG1-207ENST00000563235 MRPS14O60783 128 aaKnown RBP3.97□□□□□ -1.77
SMG1-207ENST00000563235 NGFP01138 241 aa3.97□□□□□ -1.77
SMG1-207ENST00000563235 APOHP02749 345 aaPredicted RBP3.97□□□□□ -1.77
SMG1-207ENST00000563235 CT45A6P0DMU7 189 aa3.97□□□□□ -1.77
SMG1-207ENST00000563235 CT45A5P0DMU8 189 aa3.97□□□□□ -1.77
SMG1-207ENST00000563235 CT45A7P0DMV0 189 aa3.97□□□□□ -1.77
SMG1-207ENST00000563235 FGF3P11487 239 aaPredicted RBP3.97□□□□□ -1.77
SMG1-207ENST00000563235 PDX1P52945 283 aa3.97□□□□□ -1.77
SMG1-207ENST00000563235 TAS2R30P59541 319 aa3.97□□□□□ -1.77
SMG1-207ENST00000563235 PPP1CBP62140 327 aa3.97□□□□□ -1.77
SMG1-207ENST00000563235 CT45A1Q5HYN5 189 aa3.97□□□□□ -1.77
SMG1-207ENST00000563235 CLLU1Q5K131 121 aa3.97□□□□□ -1.77
SMG1-207ENST00000563235 C1orf194Q5T5A4 169 aa3.97□□□□□ -1.77
SMG1-207ENST00000563235 TRMT10BQ6PF06 316 aaKnown RBP3.97□□□□□ -1.77
SMG1-207ENST00000563235 PDZD9Q8IXQ8 264 aa3.97□□□□□ -1.77
SMG1-207ENST00000563235 C8orf59Q8N0T1 100 aaPredicted RBP3.97□□□□□ -1.77
SMG1-207ENST00000563235 OR51A2Q8NGJ7 313 aa3.97□□□□□ -1.77
SMG1-207ENST00000563235 OR13A1Q8NGR1 328 aa3.97□□□□□ -1.77
SMG1-207ENST00000563235 OR2K2Q8NGT1 345 aa3.97□□□□□ -1.77
SMG1-207ENST00000563235 CT45A3Q8NHU0 189 aa3.97□□□□□ -1.77
SMG1-207ENST00000563235 CYGBQ8WWM9 190 aa3.97□□□□□ -1.77
SMG1-207ENST00000563235 ZNF300Q96RE9 604 aaPredicted RBP3.97□□□□□ -1.77
SMG1-207ENST00000563235 PRO1933Q9H354 126 aa3.97□□□□□ -1.77
SMG1-207ENST00000563235 C3orf14Q9HBI5 128 aa3.97□□□□□ -1.77
SMG1-207ENST00000563235 NUDT4Q9NZJ9 180 aa3.97□□□□□ -1.77
SMG1-207ENST00000563235 VDAC3Q9Y277 283 aa3.97□□□□□ -1.77
SMG1-207ENST00000563235 PLIN4Q96Q06 1357 aa3.97□□□□□ -1.77
SMG1-207ENST00000563235 DUOX1Q9NRD9 1551 aa3.96□□□□□ -1.78
SMG1-207ENST00000563235 TMEM218A2RU14 115 aa3.96□□□□□ -1.78
SMG1-207ENST00000563235 CLDN1O95832 211 aa3.96□□□□□ -1.78
SMG1-207ENST00000563235 AMBPP02760 352 aa3.96□□□□□ -1.78
SMG1-207ENST00000563235 FABP3P05413 133 aa3.96□□□□□ -1.78
SMG1-207ENST00000563235 CD58P19256 250 aa3.96□□□□□ -1.78
SMG1-207ENST00000563235 CXCL2P19875 107 aa3.96□□□□□ -1.78
SMG1-207ENST00000563235 RAB3BP20337 219 aa3.96□□□□□ -1.78
SMG1-207ENST00000563235 NPY1RP25929 384 aa3.96□□□□□ -1.78
SMG1-207ENST00000563235 CFPP27918 469 aa3.96□□□□□ -1.78
SMG1-207ENST00000563235 MDH2P40926 338 aaKnown RBP3.96□□□□□ -1.78
SMG1-207ENST00000563235 HSPE1P61604 102 aaKnown RBP3.96□□□□□ -1.78
SMG1-207ENST00000563235 SNRPD1P62314 119 aaKnown RBP3.96□□□□□ -1.78
SMG1-207ENST00000563235 HIST1H3AP68431 136 aa3.96□□□□□ -1.78
SMG1-207ENST00000563235 H3F3AP84243 136 aa3.96□□□□□ -1.78
SMG1-207ENST00000563235 MLANAQ16655 118 aa3.96□□□□□ -1.78
SMG1-207ENST00000563235 FAM183BPQ6ZVS7 135 aa3.96□□□□□ -1.78
SMG1-207ENST00000563235 HIST2H3AQ71DI3 136 aa3.96□□□□□ -1.78
SMG1-207ENST00000563235 CHMP1BQ7LBR1 199 aa3.96□□□□□ -1.78
SMG1-207ENST00000563235 NAA40Q86UY6 237 aa3.96□□□□□ -1.78
SMG1-207ENST00000563235 OR4K17Q8NGC6 315 aa3.96□□□□□ -1.78
SMG1-207ENST00000563235 OR13C8Q8NGS7 320 aa3.96□□□□□ -1.78
SMG1-207ENST00000563235 TMEM101Q96IK0 257 aa3.96□□□□□ -1.78
SMG1-207ENST00000563235 KCTD14Q9BQ13 255 aaPredicted RBP3.96□□□□□ -1.78
SMG1-207ENST00000563235 C20orf85Q9H1P6 137 aa3.96□□□□□ -1.78
SMG1-207ENST00000563235 CACYBPQ9HB71 228 aaKnown RBP3.96□□□□□ -1.78
SMG1-207ENST00000563235 SERTAD4Q9NUC0 356 aa3.96□□□□□ -1.78
SMG1-207ENST00000563235 MRPL27Q9P0M9 148 aaKnown RBP3.96□□□□□ -1.78
SMG1-207ENST00000563235 CKAP5Q14008 2032 aa3.96□□□□□ -1.78
SMG1-207ENST00000563235 COL11A2P13942 1736 aaPredicted RBP3.96□□□□□ -1.78
SMG1-207ENST00000563235 TRIOBPQ9H2D6 2365 aa3.96□□□□□ -1.78
SMG1-207ENST00000563235 A0A1B0GW64 132 aa3.96□□□□□ -1.78
SMG1-207ENST00000563235 WDR1O75083 606 aa3.96□□□□□ -1.78
SMG1-207ENST00000563235 NDUFS7O75251 213 aa3.96□□□□□ -1.78
SMG1-207ENST00000563235 CRLF1O75462 422 aa3.96□□□□□ -1.78
SMG1-207ENST00000563235 SOX14O95416 240 aa3.96□□□□□ -1.78
SMG1-207ENST00000563235 C1QAP02745 245 aa3.96□□□□□ -1.78
SMG1-207ENST00000563235 ATP1B1P05026 303 aa3.96□□□□□ -1.78
SMG1-207ENST00000563235 TSPOP30536 169 aa3.96□□□□□ -1.78
SMG1-207ENST00000563235 MARCKSL1P49006 195 aa3.96□□□□□ -1.78
SMG1-207ENST00000563235 FABP6P51161 128 aa3.96□□□□□ -1.78
SMG1-207ENST00000563235 EMP1P54849 157 aa3.96□□□□□ -1.78
SMG1-207ENST00000563235 MRPS10P82664 201 aaKnown RBP3.96□□□□□ -1.78
SMG1-207ENST00000563235 CLINT1Q14677 625 aa3.96□□□□□ -1.78
SMG1-207ENST00000563235 ZNF684Q5T5D7 378 aa3.96□□□□□ -1.78
SMG1-207ENST00000563235 STEAP4Q687X5 459 aa3.96□□□□□ -1.78
SMG1-207ENST00000563235 ZNF549Q6P9A3 640 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms