RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 OR3A1P47881 315 aa12.07□□□□□ -0.48
RABGGTA-220ENST00000560998 TMEM187Q14656 261 aa12.07□□□□□ -0.48
RABGGTA-220ENST00000560998 DCAF12Q5T6F0 453 aa12.07□□□□□ -0.48
RABGGTA-220ENST00000560998 BTNL3Q6UXE8 466 aa12.07□□□□□ -0.48
RABGGTA-220ENST00000560998 GALNTL5Q7Z4T8 443 aa12.07□□□□□ -0.48
RABGGTA-220ENST00000560998 PPP1R32Q7Z5V6 425 aa12.07□□□□□ -0.48
RABGGTA-220ENST00000560998 ZFP62Q8NB50 900 aaPredicted RBP12.07□□□□□ -0.48
RABGGTA-220ENST00000560998 HAS2Q92819 552 aa12.07□□□□□ -0.48
RABGGTA-220ENST00000560998 HSF4Q9ULV5 492 aa12.07□□□□□ -0.48
RABGGTA-220ENST00000560998 FOXI3A8MTJ6 420 aaPredicted RBP12.07□□□□□ -0.48
RABGGTA-220ENST00000560998 XRCC2O43543 280 aa12.07□□□□□ -0.48
RABGGTA-220ENST00000560998 CST2P09228 141 aa12.07□□□□□ -0.48
RABGGTA-220ENST00000560998 ZNF121P58317 390 aaPredicted RBP12.07□□□□□ -0.48
RABGGTA-220ENST00000560998 COL10A1Q03692 680 aa12.07□□□□□ -0.48
RABGGTA-220ENST00000560998 HERPUD1Q15011 391 aa12.07□□□□□ -0.48
RABGGTA-220ENST00000560998 OR8B12Q8NGG6 310 aa12.07□□□□□ -0.48
RABGGTA-220ENST00000560998 TMEM54Q969K7 222 aa12.07□□□□□ -0.48
RABGGTA-220ENST00000560998 ABHD14BQ96IU4 210 aa12.07□□□□□ -0.48
RABGGTA-220ENST00000560998 C18orf12Q96KH6 178 aa12.07□□□□□ -0.48
RABGGTA-220ENST00000560998 ZNF2Q9BSG1 426 aaPredicted RBP12.07□□□□□ -0.48
RABGGTA-220ENST00000560998 ASCL3Q9NQ33 180 aa12.07□□□□□ -0.48
RABGGTA-220ENST00000560998 CBLN4Q9NTU7 201 aa12.07□□□□□ -0.48
RABGGTA-220ENST00000560998 CISD1Q9NZ45 108 aaKnown RBP12.07□□□□□ -0.48
RABGGTA-220ENST00000560998 RCL1Q9Y2P8 373 aaKnown RBP12.07□□□□□ -0.48
RABGGTA-220ENST00000560998 COL6A3P12111 3177 aa12.07□□□□□ -0.48
RABGGTA-220ENST00000560998 KIAA1549Q9HCM3 1950 aa12.07□□□□□ -0.48
RABGGTA-220ENST00000560998 CFAP54Q96N23 3096 aa12.06□□□□□ -0.48
RABGGTA-220ENST00000560998 MED19A0JLT2 244 aaPredicted RBP12.06□□□□□ -0.48
RABGGTA-220ENST00000560998 CBR3O75828 277 aa12.06□□□□□ -0.48
RABGGTA-220ENST00000560998 ALDH3B1P43353 468 aa12.06□□□□□ -0.48
RABGGTA-220ENST00000560998 RPS18P62269 152 aaKnown RBP12.06□□□□□ -0.48
RABGGTA-220ENST00000560998 PRDX4Q13162 271 aa12.06□□□□□ -0.48
RABGGTA-220ENST00000560998 PHYHD1Q5SRE7 291 aa12.06□□□□□ -0.48
RABGGTA-220ENST00000560998 FAM90A2PQ658T7 463 aa12.06□□□□□ -0.48
RABGGTA-220ENST00000560998 LIAT1Q6ZQX7 453 aa12.06□□□□□ -0.48
RABGGTA-220ENST00000560998 OR2C3Q8N628 320 aa12.06□□□□□ -0.48
RABGGTA-220ENST00000560998 TMEM105Q8N8V8 129 aa12.06□□□□□ -0.48
RABGGTA-220ENST00000560998 NPRL2Q8WTW4 380 aa12.06□□□□□ -0.48
RABGGTA-220ENST00000560998 TMEM170AQ8WVE7 144 aa12.06□□□□□ -0.48
RABGGTA-220ENST00000560998 ZNF385AQ96PM9 386 aaKnown RBP12.06□□□□□ -0.48
RABGGTA-220ENST00000560998 HIST1H2AAQ96QV6 131 aa12.06□□□□□ -0.48
RABGGTA-220ENST00000560998 UCN2Q96RP3 112 aa12.06□□□□□ -0.48
RABGGTA-220ENST00000560998 P2RX4Q99571 388 aa12.06□□□□□ -0.48
RABGGTA-220ENST00000560998 LOXL2Q9Y4K0 774 aa12.06□□□□□ -0.48
RABGGTA-220ENST00000560998 IGHV3-15A0A0B4J1V0 119 aa12.05□□□□□ -0.48
RABGGTA-220ENST00000560998 DIRAS3O95661 229 aa12.05□□□□□ -0.48
RABGGTA-220ENST00000560998 NPSP0C0P6 89 aa12.05□□□□□ -0.48
RABGGTA-220ENST00000560998 ZNF883P0CG24 379 aa12.05□□□□□ -0.48
RABGGTA-220ENST00000560998 OTX2P32243 289 aa12.05□□□□□ -0.48
RABGGTA-220ENST00000560998 ZNF133P52736 654 aaPredicted RBP12.05□□□□□ -0.48
RABGGTA-220ENST00000560998 FAM3BP58499 235 aaPredicted RBP12.05□□□□□ -0.48
RABGGTA-220ENST00000560998 RAC1P63000 192 aa12.05□□□□□ -0.48
RABGGTA-220ENST00000560998 Q0VFX4 171 aa12.05□□□□□ -0.48
RABGGTA-220ENST00000560998 ACOT6Q3I5F7 207 aaPredicted RBP12.05□□□□□ -0.48
RABGGTA-220ENST00000560998 SAPCD1Q5SSQ6 148 aa12.05□□□□□ -0.48
RABGGTA-220ENST00000560998 C10orf128Q5T292 105 aa12.05□□□□□ -0.48
RABGGTA-220ENST00000560998 ZNF774Q6NX45 483 aa12.05□□□□□ -0.48
RABGGTA-220ENST00000560998 OR5AS1Q8N127 324 aa12.05□□□□□ -0.48
RABGGTA-220ENST00000560998 LGI3Q8N145 548 aa12.05□□□□□ -0.48
RABGGTA-220ENST00000560998 DTD1Q8TEA8 209 aa12.05□□□□□ -0.48
RABGGTA-220ENST00000560998 SGCZQ96LD1 299 aa12.05□□□□□ -0.48
RABGGTA-220ENST00000560998 BANF2Q9H503 90 aa12.05□□□□□ -0.48
RABGGTA-220ENST00000560998 C11orf1Q9H5F2 150 aa12.05□□□□□ -0.48
RABGGTA-220ENST00000560998 SDF2L1Q9HCN8 221 aa12.05□□□□□ -0.48
RABGGTA-220ENST00000560998 ZNF319Q9P2F9 582 aa12.05□□□□□ -0.48
RABGGTA-220ENST00000560998 SDK2Q58EX2 2172 aa12.05□□□□□ -0.48
RABGGTA-220ENST00000560998 NCOA6Q14686 2063 aaPredicted RBP12.05□□□□□ -0.48
RABGGTA-220ENST00000560998 A0A0G2JMM0 328 aa12.05□□□□□ -0.48
RABGGTA-220ENST00000560998 A0A0J9YW62 118 aa12.05□□□□□ -0.48
RABGGTA-220ENST00000560998 A0A1W2PPB8 328 aa12.05□□□□□ -0.48
RABGGTA-220ENST00000560998 A0A1W2PRS3 328 aa12.05□□□□□ -0.48
RABGGTA-220ENST00000560998 KIR3DP1A8MWS1 328 aa12.05□□□□□ -0.48
RABGGTA-220ENST00000560998 VAMP5O95183 116 aa12.05□□□□□ -0.48
RABGGTA-220ENST00000560998 HPNP05981 417 aa12.05□□□□□ -0.48
RABGGTA-220ENST00000560998 MSR1P21757 451 aa12.05□□□□□ -0.48
RABGGTA-220ENST00000560998 CCL1P22362 96 aa12.05□□□□□ -0.48
RABGGTA-220ENST00000560998 ANOS1P23352 680 aa12.05□□□□□ -0.48
RABGGTA-220ENST00000560998 OR3A4PP47883 348 aa12.05□□□□□ -0.48
RABGGTA-220ENST00000560998 GRB2P62993 217 aaKnown RBP12.05□□□□□ -0.48
RABGGTA-220ENST00000560998 TEX38Q6PEX7 206 aa12.05□□□□□ -0.48
RABGGTA-220ENST00000560998 C6orf15Q6UXA7 325 aaPredicted RBP12.05□□□□□ -0.48
RABGGTA-220ENST00000560998 FOXL2NBQ6ZUU3 175 aa12.05□□□□□ -0.48
RABGGTA-220ENST00000560998 ABHD12BQ7Z5M8 362 aaPredicted RBP12.05□□□□□ -0.48
RABGGTA-220ENST00000560998 TMEM123Q8N131 208 aa12.05□□□□□ -0.48
RABGGTA-220ENST00000560998 OR4D5Q8NGN0 318 aa12.05□□□□□ -0.48
RABGGTA-220ENST00000560998 CT55Q8WUE5 264 aa12.05□□□□□ -0.48
RABGGTA-220ENST00000560998 PECRQ9BY49 303 aa12.05□□□□□ -0.48
RABGGTA-220ENST00000560998 GPR173Q9NS66 373 aa12.05□□□□□ -0.48
RABGGTA-220ENST00000560998 RYDENQ9NUL5 291 aaKnown RBP12.05□□□□□ -0.48
RABGGTA-220ENST00000560998 NPIPA2E9PIF3 369 aa12.04□□□□□ -0.48
RABGGTA-220ENST00000560998 NPIPA3F8WFD2 350 aa12.04□□□□□ -0.48
RABGGTA-220ENST00000560998 TNFSF11O14788 317 aa12.04□□□□□ -0.48
RABGGTA-220ENST00000560998 OR4A8P0C604 315 aa12.04□□□□□ -0.48
RABGGTA-220ENST00000560998 CTSSP25774 331 aa12.04□□□□□ -0.48
RABGGTA-220ENST00000560998 OR10J1P30954 320 aa12.04□□□□□ -0.48
RABGGTA-220ENST00000560998 MTCP1P56278 107 aa12.04□□□□□ -0.48
RABGGTA-220ENST00000560998 PIGPP57054 158 aa12.04□□□□□ -0.48
RABGGTA-220ENST00000560998 B3GALT5-AS1P59052 145 aa12.04□□□□□ -0.48
RABGGTA-220ENST00000560998 BAXQ07812 192 aa12.04□□□□□ -0.48
RABGGTA-220ENST00000560998 FAM57BQ71RH2 274 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms