RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 SCCPDHQ8NBX0 429 aa7.92□□□□□ -1.14
GTF2A1-203ENST00000553612 KREMEN2Q8NCW0 462 aa7.92□□□□□ -1.14
GTF2A1-203ENST00000553612 RNF128Q8TEB7 428 aa7.92□□□□□ -1.14
GTF2A1-203ENST00000553612 MAP1LC3CQ9BXW4 147 aa7.92□□□□□ -1.14
GTF2A1-203ENST00000553612 RAB1BQ9H0U4 201 aa7.92□□□□□ -1.14
GTF2A1-203ENST00000553612 PSG8Q9UQ74 426 aa7.92□□□□□ -1.14
GTF2A1-203ENST00000553612 YIPF1Q9Y548 306 aa7.92□□□□□ -1.14
GTF2A1-203ENST00000553612 BCAT2O15382 392 aaPredicted RBP7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 B3GALT2O43825 422 aa7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 NDUFB2O95178 105 aa7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 SFT2D2O95562 160 aa7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 IGHA2P01877 340 aa7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 EFNB2P52799 333 aa7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 C6orf201Q7Z4U5 140 aa7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 CALHM3Q86XJ0 350 aa7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 OR8A1Q8NGG7 326 aa7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 ZNF257Q9Y2Q1 563 aa7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 ARHGEF28Q8N1W1 1705 aaKnown RBP7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 ANKRD26Q9UPS8 1709 aa7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 ZNFX1Q9P2E3 1918 aaKnown RBP7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 DNPH1O43598 174 aa7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 CSN1S1P47710 185 aa7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 MEF2BQ02080 365 aaPredicted RBP7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 PLP2Q04941 152 aa7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 SHHQ15465 462 aa7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 C3AR1Q16581 482 aa7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 PLPPR1Q8TBJ4 325 aa7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 SMIM19Q96E16 107 aa7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 GPX7Q96SL4 187 aaPredicted RBP7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 ZNF319Q9P2F9 582 aa7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 UBE2L5PA0A1B0GUS4 154 aa7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 SLC25A6P12236 298 aa7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 SRIP30626 198 aa7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 DYNLT3P51808 116 aa7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 CDK5R1Q15078 307 aa7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 PWWP2BQ6NUJ5 590 aa7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 LILRA3Q8N6C8 439 aaPredicted RBP7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 RAB1CQ92928 201 aa7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 ZNF443Q9Y2A4 671 aaPredicted RBP7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 HS3ST3A1Q9Y663 406 aa7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 ZNF638Q14966 1978 aaKnown RBP7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 TCRBV5S1A1TA0A578 114 aa7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 TUSC2O75896 110 aa7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 SRP19P09132 144 aaKnown RBP7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 CD52P31358 61 aa7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 CCL20P78556 96 aa7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 CDCP2Q5VXM1 449 aa7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 OR5A1Q8NGJ0 315 aa7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 C1QTNF9BB2RNN3 333 aa7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 G3V4G9 280 aa7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 HS3ST1O14792 307 aa7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 CD55P08174 381 aa7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 RPS15AP62244 130 aaKnown RBP7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 ADIPOQQ15848 244 aa7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 FAM57BQ71RH2 274 aa7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 PLEKHF2Q9H8W4 249 aa7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 IL23AQ9NPF7 189 aa7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 RBPJLQ9UBG7 517 aa7.91□□□□□ -1.14
GTF2A1-203ENST00000553612 PPLO60437 1756 aa7.9□□□□□ -1.14
GTF2A1-203ENST00000553612 A0A087WWC5 75 aa7.9□□□□□ -1.14
GTF2A1-203ENST00000553612 A0A0G2JLL6 359 aaPredicted RBP7.9□□□□□ -1.14
GTF2A1-203ENST00000553612 C1QTNF3-AMACRE9PGA6 284 aa7.9□□□□□ -1.14
GTF2A1-203ENST00000553612 CLRN1P58418 232 aa7.9□□□□□ -1.14
GTF2A1-203ENST00000553612 TMEM97Q5BJF2 176 aa7.9□□□□□ -1.14
GTF2A1-203ENST00000553612 SPINK9Q5DT21 86 aa7.9□□□□□ -1.14
GTF2A1-203ENST00000553612 MRPL2Q5T653 305 aaKnown RBP7.9□□□□□ -1.14
GTF2A1-203ENST00000553612 PRRT2Q7Z6L0 340 aaPredicted RBP7.9□□□□□ -1.14
GTF2A1-203ENST00000553612 PIGTQ969N2 578 aa7.9□□□□□ -1.14
GTF2A1-203ENST00000553612 OR8B2Q96RD0 313 aa7.9□□□□□ -1.14
GTF2A1-203ENST00000553612 MMP25Q9NPA2 562 aa7.9□□□□□ -1.14
GTF2A1-203ENST00000553612 CRIM1Q9NZV1 1036 aa7.9□□□□□ -1.14
GTF2A1-203ENST00000553612 TEX48A0A1B0GUV7 120 aa7.9□□□□□ -1.14
GTF2A1-203ENST00000553612 KLF7O75840 302 aaPredicted RBP7.9□□□□□ -1.14
GTF2A1-203ENST00000553612 SEC11BP0C7V7 166 aa7.9□□□□□ -1.14
GTF2A1-203ENST00000553612 RPL13AP40429 203 aaKnown RBP7.9□□□□□ -1.14
GTF2A1-203ENST00000553612 BCL6P41182 706 aa7.9□□□□□ -1.14
GTF2A1-203ENST00000553612 P2RY1P47900 373 aa7.9□□□□□ -1.14
GTF2A1-203ENST00000553612 PRTGQ2VWP7 1150 aa7.9□□□□□ -1.14
GTF2A1-203ENST00000553612 PARM1Q6UWI2 310 aa7.9□□□□□ -1.14
GTF2A1-203ENST00000553612 SOCS4Q8WXH5 440 aa7.9□□□□□ -1.14
GTF2A1-203ENST00000553612 MYEOVQ96EZ4 313 aa7.9□□□□□ -1.14
GTF2A1-203ENST00000553612 MAGEH1Q9H213 219 aa7.9□□□□□ -1.14
GTF2A1-203ENST00000553612 J3QR06 171 aa7.9□□□□□ -1.14
GTF2A1-203ENST00000553612 HSPB1P04792 205 aaKnown RBP7.9□□□□□ -1.14
GTF2A1-203ENST00000553612 DANCRP0C864 163 aa7.9□□□□□ -1.14
GTF2A1-203ENST00000553612 SMIM10L2AP0DMW4 78 aa7.9□□□□□ -1.14
GTF2A1-203ENST00000553612 SMIM10L2BP0DMW5 78 aa7.9□□□□□ -1.14
GTF2A1-203ENST00000553612 UBE2G1P62253 170 aa7.9□□□□□ -1.14
GTF2A1-203ENST00000553612 GLIPR1L1Q6UWM5 242 aa7.9□□□□□ -1.14
GTF2A1-203ENST00000553612 SLC25A42Q86VD7 318 aa7.9□□□□□ -1.14
GTF2A1-203ENST00000553612 CCDC71LQ8N9Z2 235 aa7.9□□□□□ -1.14
GTF2A1-203ENST00000553612 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.9□□□□□ -1.14
GTF2A1-203ENST00000553612 LINC00470Q9BZP3 86 aa7.9□□□□□ -1.14
GTF2A1-203ENST00000553612 DMRT3Q9NQL9 472 aa7.9□□□□□ -1.14
GTF2A1-203ENST00000553612 SIRPB1O00241 398 aa7.9□□□□□ -1.15
GTF2A1-203ENST00000553612 CA7P43166 264 aa7.9□□□□□ -1.15
GTF2A1-203ENST00000553612 ZNF415Q09FC8 603 aa7.9□□□□□ -1.15
GTF2A1-203ENST00000553612 TMEM116Q8NCL8 245 aa7.9□□□□□ -1.15
GTF2A1-203ENST00000553612 MMABQ96EY8 250 aaPredicted RBP7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms