RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 FAM90A5PA8MXJ8 464 aa12.77□□□□□ -0.37
CHMP1A-206ENST00000549139 FAM90A23PA8MXZ1 464 aa12.77□□□□□ -0.37
CHMP1A-206ENST00000549139 MELTFP08582 738 aa12.77□□□□□ -0.37
CHMP1A-206ENST00000549139 FAM90A15PP0C7V4 464 aa12.77□□□□□ -0.37
CHMP1A-206ENST00000549139 FAM90A13PP0C7W8 464 aa12.77□□□□□ -0.37
CHMP1A-206ENST00000549139 FAM90A14PP0C7W9 464 aa12.77□□□□□ -0.37
CHMP1A-206ENST00000549139 FAM90A24PP0C7X0 464 aa12.77□□□□□ -0.37
CHMP1A-206ENST00000549139 IGHV1-8P0DP01 117 aa12.77□□□□□ -0.37
CHMP1A-206ENST00000549139 MGMTP16455 207 aa12.77□□□□□ -0.37
CHMP1A-206ENST00000549139 CALRP27797 417 aaKnown RBP12.77□□□□□ -0.37
CHMP1A-206ENST00000549139 HTR2CP28335 458 aa12.77□□□□□ -0.37
CHMP1A-206ENST00000549139 RPL15P61313 204 aaKnown RBP12.77□□□□□ -0.37
CHMP1A-206ENST00000549139 ATXN7L3Q14CW9 347 aaPredicted RBP12.77□□□□□ -0.37
CHMP1A-206ENST00000549139 BEAN1Q3B7T3 259 aa12.77□□□□□ -0.37
CHMP1A-206ENST00000549139 Q6ZPA2 131 aa12.77□□□□□ -0.37
CHMP1A-206ENST00000549139 TRAPPC6BQ86SZ2 158 aa12.77□□□□□ -0.37
CHMP1A-206ENST00000549139 DPCDQ9BVM2 203 aaPredicted RBP12.77□□□□□ -0.37
CHMP1A-206ENST00000549139 CST11Q9H112 138 aa12.77□□□□□ -0.37
CHMP1A-206ENST00000549139 GAL3ST2Q9H3Q3 398 aa12.77□□□□□ -0.37
CHMP1A-206ENST00000549139 BANF2Q9H503 90 aa12.77□□□□□ -0.37
CHMP1A-206ENST00000549139 SPACA1Q9HBV2 294 aa12.77□□□□□ -0.37
CHMP1A-206ENST00000549139 OR6C3Q9NZP0 311 aa12.77□□□□□ -0.37
CHMP1A-206ENST00000549139 FAM96BQ9Y3D0 163 aa12.77□□□□□ -0.37
CHMP1A-206ENST00000549139 POMT1Q9Y6A1 747 aa12.77□□□□□ -0.37
CHMP1A-206ENST00000549139 A0A1W2PRD5 423 aa12.76□□□□□ -0.37
CHMP1A-206ENST00000549139 A0A1W2PRF3 423 aa12.76□□□□□ -0.37
CHMP1A-206ENST00000549139 A0A1W2PRM7 423 aa12.76□□□□□ -0.37
CHMP1A-206ENST00000549139 H3BUI4 141 aa12.76□□□□□ -0.37
CHMP1A-206ENST00000549139 HSPB6O14558 160 aa12.76□□□□□ -0.37
CHMP1A-206ENST00000549139 SLC22A1O15245 554 aa12.76□□□□□ -0.37
CHMP1A-206ENST00000549139 CRTAPO75718 401 aaPredicted RBP12.76□□□□□ -0.37
CHMP1A-206ENST00000549139 FBP1P09467 338 aa12.76□□□□□ -0.37
CHMP1A-206ENST00000549139 CGB3P0DN86 165 aa12.76□□□□□ -0.37
CHMP1A-206ENST00000549139 CGB7P0DN87 165 aa12.76□□□□□ -0.37
CHMP1A-206ENST00000549139 PSMB9P28065 219 aa12.76□□□□□ -0.37
CHMP1A-206ENST00000549139 RANBP1P43487 201 aa12.76□□□□□ -0.37
CHMP1A-206ENST00000549139 PSMD7P51665 324 aa12.76□□□□□ -0.37
CHMP1A-206ENST00000549139 ATAD3CQ5T2N8 411 aa12.76□□□□□ -0.37
CHMP1A-206ENST00000549139 KPRPQ5T749 579 aaPredicted RBP12.76□□□□□ -0.37
CHMP1A-206ENST00000549139 SYT6Q5T7P8 510 aaPredicted RBP12.76□□□□□ -0.37
CHMP1A-206ENST00000549139 RSBN1Q5VWQ0 802 aaPredicted RBP12.76□□□□□ -0.37
CHMP1A-206ENST00000549139 SLC35E4Q6ICL7 350 aa12.76□□□□□ -0.37
CHMP1A-206ENST00000549139 ZNF782Q6ZMW2 699 aaPredicted RBP12.76□□□□□ -0.37
CHMP1A-206ENST00000549139 LDLRAD3Q86YD5 345 aa12.76□□□□□ -0.37
CHMP1A-206ENST00000549139 PNKDQ8N490 385 aa12.76□□□□□ -0.37
CHMP1A-206ENST00000549139 ZNF565Q8N9K5 539 aa12.76□□□□□ -0.37
CHMP1A-206ENST00000549139 TMEM104Q8NE00 496 aa12.76□□□□□ -0.37
CHMP1A-206ENST00000549139 OR6M1Q8NGM8 313 aa12.76□□□□□ -0.37
CHMP1A-206ENST00000549139 OR13D1Q8NGV5 346 aa12.76□□□□□ -0.37
CHMP1A-206ENST00000549139 GFI1Q99684 422 aa12.76□□□□□ -0.37
CHMP1A-206ENST00000549139 SELENOIQ9C0D9 397 aa12.76□□□□□ -0.37
CHMP1A-206ENST00000549139 ING3Q9NXR8 418 aa12.76□□□□□ -0.37
CHMP1A-206ENST00000549139 ZNF581Q9P0T4 197 aa12.76□□□□□ -0.37
CHMP1A-206ENST00000549139 AK6Q9Y3D8 172 aaKnown RBP12.76□□□□□ -0.37
CHMP1A-206ENST00000549139 TRAV1-2A0A0B4J238 106 aa12.75□□□□□ -0.37
CHMP1A-206ENST00000549139 MEIOCA2RUB1 952 aa12.75□□□□□ -0.37
CHMP1A-206ENST00000549139 ZNF729A6NN14 1252 aaPredicted RBP12.75□□□□□ -0.37
CHMP1A-206ENST00000549139 SLC17A2O00624 439 aa12.75□□□□□ -0.37
CHMP1A-206ENST00000549139 VSIG8P0DPA2 414 aa12.75□□□□□ -0.37
CHMP1A-206ENST00000549139 SAA4P35542 130 aa12.75□□□□□ -0.37
CHMP1A-206ENST00000549139 OR52W1Q6IF63 320 aa12.75□□□□□ -0.37
CHMP1A-206ENST00000549139 HEPN1Q6WQI6 88 aa12.75□□□□□ -0.37
CHMP1A-206ENST00000549139 OR11H6Q8NGC7 330 aa12.75□□□□□ -0.37
CHMP1A-206ENST00000549139 KCNG3Q8TAE7 436 aa12.75□□□□□ -0.37
CHMP1A-206ENST00000549139 FAM110DQ8TAY7 271 aaPredicted RBP12.75□□□□□ -0.37
CHMP1A-206ENST00000549139 PLPPR1Q8TBJ4 325 aa12.75□□□□□ -0.37
CHMP1A-206ENST00000549139 Q96M66 194 aa12.75□□□□□ -0.37
CHMP1A-206ENST00000549139 RCC2Q9P258 522 aaKnown RBP12.75□□□□□ -0.37
CHMP1A-206ENST00000549139 KIF25Q9UIL4 384 aa12.75□□□□□ -0.37
CHMP1A-206ENST00000549139 SESN1Q9Y6P5 492 aa12.75□□□□□ -0.37
CHMP1A-206ENST00000549139 V9GY05 133 aa12.75□□□□□ -0.37
CHMP1A-206ENST00000549139 MEIKINA0A087WXM9 373 aa12.74□□□□□ -0.37
CHMP1A-206ENST00000549139 MCRIP1C9JLW8 97 aa12.74□□□□□ -0.37
CHMP1A-206ENST00000549139 PDCD5O14737 125 aa12.74□□□□□ -0.37
CHMP1A-206ENST00000549139 TNFAIP8O95379 198 aa12.74□□□□□ -0.37
CHMP1A-206ENST00000549139 BPNT1O95861 308 aa12.74□□□□□ -0.37
CHMP1A-206ENST00000549139 GLAP06280 429 aa12.74□□□□□ -0.37
CHMP1A-206ENST00000549139 COX7A1P24310 79 aa12.74□□□□□ -0.37
CHMP1A-206ENST00000549139 FGF9P31371 208 aaPredicted RBP12.74□□□□□ -0.37
CHMP1A-206ENST00000549139 IER3P46695 156 aa12.74□□□□□ -0.37
CHMP1A-206ENST00000549139 LGALS4P56470 323 aa12.74□□□□□ -0.37
CHMP1A-206ENST00000549139 RBM39Q14498 530 aaKnown RBP12.74□□□□□ -0.37
CHMP1A-206ENST00000549139 C17orf58Q2M2W7 97 aa12.74□□□□□ -0.37
CHMP1A-206ENST00000549139 SSMEM1Q8WWF3 244 aa12.74□□□□□ -0.37
CHMP1A-206ENST00000549139 DYRK2Q92630 601 aa12.74□□□□□ -0.37
CHMP1A-206ENST00000549139 AJUBAQ96IF1 538 aa12.74□□□□□ -0.37
CHMP1A-206ENST00000549139 MEGF9Q9H1U4 602 aa12.74□□□□□ -0.37
CHMP1A-206ENST00000549139 DPAGT1Q9H3H5 408 aa12.74□□□□□ -0.37
CHMP1A-206ENST00000549139 PLGRKTQ9HBL7 147 aa12.74□□□□□ -0.37
CHMP1A-206ENST00000549139 ZNRD1Q9P1U0 126 aa12.74□□□□□ -0.37
CHMP1A-206ENST00000549139 DNAH3Q8TD57 4116 aa12.73□□□□□ -0.37
CHMP1A-206ENST00000549139 A0A087WXM4 84 aa12.73□□□□□ -0.37
CHMP1A-206ENST00000549139 KBTBD11-OT1A0A1B0GTJ5 212 aa12.73□□□□□ -0.37
CHMP1A-206ENST00000549139 TMEM14DPA8MWL7 114 aa12.73□□□□□ -0.37
CHMP1A-206ENST00000549139 G3V4G9 280 aa12.73□□□□□ -0.37
CHMP1A-206ENST00000549139 GPR137BO60478 399 aa12.73□□□□□ -0.37
CHMP1A-206ENST00000549139 MMP23AO75900 390 aa12.73□□□□□ -0.37
CHMP1A-206ENST00000549139 MPIG6BO95866 241 aa12.73□□□□□ -0.37
CHMP1A-206ENST00000549139 PAHP00439 452 aa12.73□□□□□ -0.37
CHMP1A-206ENST00000549139 GZMHP20718 246 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms